C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for F38B7.5

Gene ID Gene Name Reads Transcripts Annotation
F38B7.5 duo-1 3087 F38B7.5 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_505931]

Genes with expression patterns similar to F38B7.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F38B7.5 duo-1 3087 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_505931]
2. ZK507.6 cya-1 6807 7.691 0.930 0.975 0.950 0.975 0.957 0.980 0.959 0.965 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
3. Y56A3A.17 npp-16 5391 7.671 0.929 0.956 0.956 0.956 0.960 0.988 0.952 0.974 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
4. F55G1.8 plk-3 12036 7.67 0.923 0.961 0.978 0.961 0.969 0.978 0.936 0.964 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
5. F41H10.4 F41H10.4 3295 7.67 0.953 0.973 0.961 0.973 0.973 0.946 0.950 0.941
6. R12C12.2 ran-5 14517 7.654 0.939 0.967 0.957 0.967 0.946 0.964 0.960 0.954 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
7. C05C8.6 hpo-9 8263 7.65 0.922 0.959 0.936 0.959 0.978 0.968 0.972 0.956
8. F25B5.2 nop-1 4127 7.647 0.914 0.952 0.947 0.952 0.978 0.982 0.943 0.979 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
9. Y17G9B.3 cyp-31A3 1709 7.644 0.937 0.972 0.910 0.972 0.967 0.972 0.974 0.940 CYtochrome P450 family [Source:RefSeq peptide;Acc:NP_500637]
10. D1081.8 cdc-5L 8553 7.643 0.950 0.936 0.969 0.936 0.968 0.971 0.960 0.953 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
11. T05H4.14 gad-1 7979 7.64 0.912 0.967 0.963 0.967 0.963 0.975 0.954 0.939 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
12. T01C3.1 cdt-2 5193 7.633 0.918 0.972 0.907 0.972 0.975 0.977 0.954 0.958 CDT (S. pombe CDC10 Dependent Transcript) homolog [Source:RefSeq peptide;Acc:NP_506685]
13. Y65B4BL.2 deps-1 18277 7.631 0.930 0.927 0.971 0.927 0.973 0.987 0.974 0.942
14. ZK1098.8 mut-7 4940 7.631 0.939 0.965 0.942 0.965 0.978 0.959 0.928 0.955 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
15. Y54H5A.3 tag-262 4269 7.63 0.936 0.950 0.954 0.950 0.952 0.954 0.970 0.964
16. K08E7.3 let-99 6791 7.629 0.936 0.967 0.963 0.967 0.931 0.968 0.940 0.957
17. C17E4.10 C17E4.10 7034 7.626 0.945 0.951 0.957 0.951 0.973 0.979 0.970 0.900
18. K12D12.2 npp-3 6914 7.624 0.900 0.949 0.947 0.949 0.981 0.990 0.960 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
19. W03G1.6 pig-1 5015 7.623 0.917 0.951 0.954 0.951 0.963 0.990 0.960 0.937 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
20. F18C5.2 wrn-1 3792 7.619 0.899 0.945 0.969 0.945 0.956 0.983 0.954 0.968 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
21. C36B1.8 gls-1 8617 7.619 0.945 0.967 0.965 0.967 0.957 0.939 0.959 0.920 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
22. C27B7.1 spr-2 14958 7.614 0.902 0.956 0.964 0.956 0.967 0.965 0.958 0.946 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
23. C28H8.9 dpff-1 8684 7.612 0.932 0.953 0.959 0.953 0.984 0.951 0.927 0.953 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
24. K07A12.2 egg-6 18331 7.611 0.941 0.957 0.946 0.957 0.954 0.986 0.942 0.928 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
25. C18G1.5 hil-4 21692 7.608 0.926 0.955 0.945 0.955 0.962 0.977 0.982 0.906 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
26. C02B10.5 C02B10.5 9171 7.607 0.928 0.944 0.964 0.944 0.971 0.960 0.970 0.926
27. T24F1.2 samp-1 8422 7.606 0.940 0.959 0.929 0.959 0.973 0.936 0.958 0.952 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
28. C18G1.4 pgl-3 5291 7.603 0.920 0.982 0.932 0.982 0.978 0.960 0.911 0.938 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
29. F10B5.5 pch-2 2299 7.602 0.905 0.961 0.893 0.961 0.973 0.993 0.933 0.983 Putative pachytene checkpoint protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09535]
30. F10E9.8 sas-4 3703 7.601 0.915 0.949 0.936 0.949 0.955 0.980 0.943 0.974 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
31. Y17G7A.1 hmg-12 29989 7.6 0.914 0.927 0.966 0.927 0.953 0.970 0.986 0.957 HMG [Source:RefSeq peptide;Acc:NP_496544]
32. T09A5.8 cec-3 5813 7.594 0.926 0.954 0.915 0.954 0.960 0.979 0.959 0.947 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
33. B0464.9 B0464.9 2997 7.591 0.908 0.954 0.934 0.954 0.975 0.972 0.955 0.939 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
34. F37A4.9 bath-41 2558 7.59 0.939 0.958 0.907 0.958 0.953 0.981 0.947 0.947 BTB and MATH domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:P41886]
35. F52C9.7 mog-3 9880 7.59 0.928 0.941 0.966 0.941 0.948 0.979 0.977 0.910 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
36. K02F3.11 rnp-5 6205 7.588 0.906 0.937 0.957 0.937 0.984 0.975 0.959 0.933 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
37. C08B11.5 sap-49 10553 7.588 0.898 0.934 0.956 0.934 0.973 0.960 0.973 0.960 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
38. Y54E5A.4 npp-4 6288 7.588 0.917 0.951 0.973 0.951 0.956 0.975 0.938 0.927 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
39. B0035.3 B0035.3 4118 7.586 0.935 0.938 0.970 0.938 0.968 0.948 0.958 0.931
40. F53A3.2 polh-1 2467 7.583 0.940 0.944 0.963 0.944 0.924 0.968 0.955 0.945 POLH (DNA polymerase eta) homolog [Source:RefSeq peptide;Acc:NP_497480]
41. ZK637.7 lin-9 5999 7.581 0.940 0.975 0.957 0.975 0.966 0.936 0.938 0.894
42. T05E11.4 spo-11 2806 7.578 0.934 0.968 0.926 0.968 0.956 0.962 0.906 0.958 Meiotic recombination protein spo-11 [Source:UniProtKB/Swiss-Prot;Acc:Q22236]
43. F18E2.3 scc-3 13464 7.577 0.933 0.952 0.963 0.952 0.944 0.938 0.942 0.953 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
44. C36B1.3 rpb-3 4442 7.576 0.932 0.936 0.945 0.936 0.985 0.970 0.936 0.936 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
45. F32H2.4 thoc-3 3861 7.572 0.895 0.930 0.963 0.930 0.986 0.956 0.960 0.952 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
46. C06A5.9 rnf-1 2469 7.571 0.934 0.941 0.923 0.941 0.951 0.973 0.983 0.925 RiNg Finger protein [Source:RefSeq peptide;Acc:NP_491738]
47. Y39G10AR.7 ekl-7 7072 7.57 0.883 0.942 0.951 0.942 0.981 0.980 0.952 0.939
48. F31E3.3 rfc-4 3828 7.569 0.885 0.951 0.957 0.951 0.957 0.979 0.984 0.905 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
49. F08B4.5 pole-2 8234 7.568 0.907 0.961 0.959 0.961 0.966 0.961 0.913 0.940 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
50. K06A5.7 cdc-25.1 14961 7.567 0.908 0.970 0.924 0.970 0.943 0.969 0.959 0.924 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
51. Y73F8A.34 tag-349 7966 7.564 0.922 0.934 0.967 0.934 0.956 0.965 0.965 0.921
52. Y74C9A.4 rcor-1 4686 7.564 0.912 0.945 0.960 0.945 0.967 0.927 0.945 0.963 RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207]
53. T13F2.7 sna-2 4771 7.56 0.890 0.939 0.915 0.939 0.976 0.986 0.954 0.961 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
54. F32D1.6 neg-1 4990 7.56 0.914 0.954 0.883 0.954 0.959 0.986 0.972 0.938 Negative Effect on Gut development [Source:RefSeq peptide;Acc:NP_001256036]
55. Y46G5A.4 snrp-200 13827 7.558 0.909 0.921 0.969 0.921 0.965 0.974 0.977 0.922 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
56. C39E9.13 rfc-3 9443 7.558 0.943 0.956 0.958 0.956 0.977 0.958 0.964 0.846 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
57. Y113G7B.5 fog-2 2753 7.557 0.904 0.965 0.966 0.965 0.927 0.924 0.950 0.956 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
58. F30F8.3 gras-1 5902 7.557 0.935 0.945 0.928 0.945 0.951 0.966 0.925 0.962 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
59. R119.4 pqn-59 16065 7.553 0.927 0.947 0.968 0.947 0.946 0.946 0.920 0.952 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
60. C33H5.15 sgo-1 3674 7.551 0.896 0.965 0.931 0.965 0.957 0.949 0.931 0.957 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
61. F56C9.6 F56C9.6 4303 7.549 0.933 0.938 0.939 0.938 0.924 0.977 0.940 0.960
62. Y54E2A.3 tac-1 6308 7.548 0.910 0.945 0.940 0.945 0.973 0.954 0.958 0.923 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
63. F23F1.1 nfyc-1 9983 7.547 0.901 0.938 0.952 0.938 0.944 0.963 0.975 0.936 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
64. B0336.1 wrm-1 8284 7.546 0.926 0.966 0.960 0.966 0.921 0.919 0.958 0.930 Armadillo repeat-containing protein wrm-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10953]
65. R02D3.5 fnta-1 5258 7.545 0.932 0.963 0.951 0.963 0.961 0.928 0.932 0.915 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
66. E01A2.4 let-504 9788 7.543 0.911 0.936 0.930 0.936 0.970 0.968 0.950 0.942
67. K04C2.4 brd-1 2439 7.542 0.891 0.959 0.913 0.959 0.980 0.968 0.946 0.926 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
68. Y17G7B.5 mcm-2 6246 7.542 0.931 0.957 0.958 0.957 0.912 0.976 0.934 0.917 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
69. T05H10.2 apn-1 5628 7.542 0.909 0.959 0.944 0.959 0.967 0.956 0.946 0.902 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
70. Y38A8.3 ulp-2 7403 7.538 0.924 0.927 0.945 0.927 0.979 0.975 0.942 0.919 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
71. C26E6.5 fsn-1 6615 7.538 0.927 0.943 0.952 0.943 0.935 0.923 0.956 0.959 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
72. F59A2.1 npp-9 34375 7.538 0.919 0.959 0.976 0.959 0.918 0.946 0.912 0.949 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
73. C08B6.9 aos-1 3892 7.537 0.914 0.955 0.961 0.955 0.955 0.947 0.915 0.935 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
74. Y73B6BL.38 puf-11 15511 7.537 0.905 0.966 0.902 0.966 0.928 0.966 0.951 0.953 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_741425]
75. T19B4.2 npp-7 13073 7.536 0.877 0.947 0.985 0.947 0.969 0.967 0.942 0.902 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
76. Y43F4B.4 npp-18 4780 7.534 0.921 0.967 0.943 0.967 0.944 0.912 0.941 0.939 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
77. C52E4.6 cyl-1 6405 7.534 0.912 0.934 0.944 0.934 0.983 0.962 0.941 0.924 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
78. K02F2.3 teg-4 3873 7.533 0.926 0.939 0.955 0.939 0.966 0.976 0.949 0.883 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
79. K01G5.4 ran-1 32379 7.531 0.911 0.931 0.948 0.931 0.956 0.963 0.964 0.927 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
80. F58D5.4 ksr-2 5973 7.531 0.895 0.974 0.938 0.974 0.965 0.968 0.937 0.880 Kinase suppressor of Ras B [Source:UniProtKB/Swiss-Prot;Acc:G5EDA5]
81. ZK1127.4 ZK1127.4 3088 7.53 0.925 0.918 0.967 0.918 0.955 0.931 0.974 0.942 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
82. T04A8.10 sel-13 3109 7.526 0.896 0.964 0.962 0.964 0.986 0.933 0.977 0.844 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
83. T07F8.3 gld-3 9324 7.525 0.944 0.969 0.936 0.969 0.955 0.923 0.895 0.934 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
84. F58A4.3 hcp-3 8787 7.524 0.913 0.976 0.952 0.976 0.976 0.980 0.934 0.817 Histone H3-like centromeric protein hcp-3 [Source:UniProtKB/Swiss-Prot;Acc:P34470]
85. T04A8.14 emb-5 11746 7.523 0.921 0.944 0.958 0.944 0.952 0.921 0.956 0.927 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
86. C07A9.7 set-3 2026 7.523 0.950 0.963 0.929 0.963 0.974 0.880 0.908 0.956 SET domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P34318]
87. ZK381.1 him-3 4913 7.519 0.876 0.889 0.967 0.889 0.972 0.974 0.980 0.972 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
88. Y39G10AL.3 cdk-7 3495 7.519 0.928 0.941 0.949 0.941 0.930 0.937 0.957 0.936 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
89. F28D9.1 rsr-1 4282 7.519 0.893 0.950 0.956 0.950 0.965 0.942 0.956 0.907 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
90. Y46G5A.5 pisy-1 13040 7.517 0.922 0.972 0.946 0.972 0.934 0.903 0.952 0.916 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
91. F39H2.5 mrt-1 1321 7.517 0.877 0.955 0.957 0.955 0.968 0.972 0.925 0.908 MoRTal germline [Source:RefSeq peptide;Acc:NP_740895]
92. F46B6.3 smg-4 4959 7.515 0.914 0.917 0.955 0.917 0.961 0.966 0.945 0.940 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
93. T23B5.1 prmt-3 10677 7.515 0.921 0.957 0.974 0.957 0.936 0.937 0.954 0.879 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
94. T20G5.11 rde-4 3966 7.515 0.939 0.923 0.938 0.923 0.961 0.956 0.928 0.947 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
95. F58F6.4 rfc-2 2074 7.514 0.917 0.926 0.949 0.926 0.938 0.970 0.946 0.942 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
96. D1054.14 prp-38 6504 7.514 0.904 0.938 0.954 0.938 0.977 0.964 0.920 0.919 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
97. C04H5.6 mog-4 4517 7.51 0.872 0.942 0.957 0.942 0.935 0.976 0.965 0.921 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
98. Y37A1B.1 lst-3 10739 7.51 0.889 0.933 0.969 0.933 0.963 0.956 0.948 0.919 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
99. T26A5.5 jhdm-1 12698 7.51 0.896 0.939 0.966 0.939 0.963 0.979 0.922 0.906 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
100. Y32F6A.1 set-22 2474 7.508 0.944 0.913 0.913 0.913 0.970 0.946 0.962 0.947 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_505681]

There are 2078 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA