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Results for R166.4

Gene ID Gene Name Reads Transcripts Annotation
R166.4 pro-1 2701 R166.4 Pre-rRNA-processing protein pro-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22006]

Genes with expression patterns similar to R166.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R166.4 pro-1 2701 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Pre-rRNA-processing protein pro-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22006]
2. T01C3.7 fib-1 23572 7.611 0.910 0.923 0.962 0.923 0.985 0.971 0.973 0.964 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
3. C27H6.2 ruvb-1 6291 7.604 0.938 0.927 0.942 0.927 0.963 0.989 0.966 0.952 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
4. C07E3.2 pro-2 4193 7.588 0.884 0.939 0.966 0.939 0.975 0.980 0.953 0.952 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
5. C25A1.10 dao-5 18351 7.588 0.887 0.940 0.935 0.940 0.982 0.973 0.953 0.978 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
6. Y113G7B.17 prmt-1 43709 7.588 0.906 0.914 0.947 0.914 0.990 0.967 0.975 0.975 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
7. R13A5.12 lpd-7 10476 7.57 0.940 0.916 0.924 0.916 0.973 0.961 0.968 0.972 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
8. C15H11.9 rrbs-1 9177 7.556 0.924 0.910 0.929 0.910 0.985 0.944 0.979 0.975 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
9. C06A1.5 rpb-6 7515 7.556 0.895 0.948 0.949 0.948 0.975 0.917 0.959 0.965 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
10. D2096.8 nap-1 59459 7.552 0.905 0.925 0.916 0.925 0.990 0.959 0.968 0.964 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
11. W01B11.3 nol-5 23544 7.535 0.877 0.930 0.934 0.930 0.965 0.939 0.986 0.974 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
12. Y53C12B.3 nos-3 20231 7.533 0.921 0.904 0.925 0.904 0.984 0.965 0.954 0.976 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
13. K08F4.2 gtbp-1 25222 7.531 0.912 0.916 0.915 0.916 0.976 0.958 0.967 0.971 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
14. Y50D7A.9 taco-1 5949 7.525 0.955 0.919 0.921 0.919 0.974 0.922 0.957 0.958 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
15. H12I13.4 fbf-1 5587 7.522 0.913 0.949 0.943 0.949 0.976 0.945 0.900 0.947 Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]
16. Y116A8C.42 snr-1 17062 7.519 0.908 0.922 0.939 0.922 0.987 0.938 0.961 0.942 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
17. F10G7.1 tag-151 9031 7.517 0.889 0.913 0.937 0.913 0.989 0.958 0.974 0.944 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
18. T02G5.9 kars-1 9763 7.517 0.927 0.927 0.947 0.927 0.967 0.940 0.936 0.946 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
19. Y48B6A.3 xrn-2 4881 7.51 0.895 0.911 0.929 0.911 0.977 0.948 0.972 0.967 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
20. T19A6.2 ngp-1 5884 7.509 0.936 0.931 0.895 0.931 0.966 0.949 0.959 0.942 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
21. T28D9.10 snr-3 9995 7.509 0.919 0.911 0.920 0.911 0.984 0.960 0.947 0.957 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
22. T23F6.4 rbd-1 5825 7.506 0.861 0.917 0.947 0.917 0.950 0.979 0.960 0.975 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
23. Y39B6A.35 tgt-2 2364 7.501 0.879 0.935 0.936 0.935 0.971 0.960 0.943 0.942 Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
24. T21G5.3 glh-1 16470 7.494 0.884 0.929 0.946 0.929 0.961 0.965 0.928 0.952 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
25. F55H2.6 clu-1 21404 7.491 0.906 0.931 0.909 0.931 0.978 0.942 0.947 0.947 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
26. C14A4.14 mrps-22 7966 7.489 0.904 0.916 0.929 0.916 0.959 0.935 0.950 0.980 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
27. Y71G12B.9 lin-65 7476 7.489 0.871 0.904 0.955 0.904 0.986 0.948 0.956 0.965 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
28. C16A3.3 let-716 8448 7.484 0.821 0.925 0.924 0.925 0.966 0.967 0.969 0.987
29. Y23H5B.6 Y23H5B.6 5886 7.483 0.888 0.916 0.928 0.916 0.980 0.957 0.928 0.970
30. Y37D8A.11 cec-7 8801 7.481 0.915 0.898 0.932 0.898 0.986 0.976 0.975 0.901 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
31. F20A1.9 tofu-2 3341 7.479 0.907 0.918 0.943 0.918 0.983 0.959 0.934 0.917 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_504786]
32. Y54H5A.2 Y54H5A.2 2168 7.479 0.915 0.891 0.943 0.891 0.987 0.952 0.949 0.951
33. C34D4.12 cyn-12 7363 7.476 0.920 0.890 0.922 0.890 0.987 0.963 0.971 0.933 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
34. B0414.3 hil-5 10816 7.474 0.833 0.903 0.951 0.903 0.977 0.966 0.973 0.968 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
35. C01G8.6 hpo-32 7439 7.471 0.860 0.933 0.900 0.933 0.976 0.969 0.957 0.943
36. B0513.2 B0513.2 3641 7.469 0.859 0.894 0.942 0.894 0.961 0.968 0.987 0.964
37. F56D12.5 vig-1 42594 7.468 0.894 0.927 0.924 0.927 0.962 0.954 0.925 0.955 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
38. K07A12.7 mrps-15 6325 7.465 0.896 0.959 0.928 0.959 0.928 0.936 0.907 0.952 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
39. K07F5.15 K07F5.15 10171 7.464 0.872 0.951 0.949 0.951 0.951 0.969 0.886 0.935
40. C06E1.10 rha-2 2016 7.464 0.956 0.905 0.915 0.905 0.939 0.951 0.932 0.961 Putative ATP-dependent RNA helicase rha-2 [Source:UniProtKB/Swiss-Prot;Acc:P34305]
41. T03D8.2 mrps-12 8253 7.461 0.875 0.915 0.945 0.915 0.983 0.920 0.964 0.944 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
42. C16A3.5 C16A3.5 17736 7.459 0.941 0.894 0.898 0.894 0.974 0.954 0.955 0.949
43. C03D6.8 rpl-24.2 5932 7.456 0.896 0.892 0.924 0.892 0.966 0.968 0.963 0.955 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
44. F09F7.3 rpc-2 9751 7.454 0.893 0.913 0.916 0.913 0.978 0.973 0.955 0.913 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
45. F41G3.14 exos-8 2300 7.454 0.896 0.888 0.946 0.888 0.988 0.939 0.936 0.973 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
46. W08E3.1 snr-2 14849 7.451 0.920 0.911 0.935 0.911 0.952 0.916 0.945 0.961 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
47. T21B10.7 cct-2 13999 7.448 0.906 0.925 0.940 0.925 0.980 0.939 0.944 0.889 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
48. F59A2.3 cri-3 15077 7.448 0.888 0.934 0.892 0.934 0.960 0.941 0.947 0.952 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
49. F14B4.3 rpoa-2 7549 7.438 0.828 0.919 0.905 0.919 0.985 0.972 0.966 0.944 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
50. Y56A3A.19 Y56A3A.19 9680 7.437 0.931 0.891 0.928 0.891 0.982 0.905 0.953 0.956 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
51. F55F8.3 F55F8.3 2107 7.435 0.845 0.900 0.953 0.900 0.981 0.961 0.928 0.967 Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
52. F18C5.3 tag-184 4027 7.433 0.852 0.914 0.921 0.914 0.955 0.968 0.973 0.936
53. T25G3.4 T25G3.4 9394 7.432 0.901 0.895 0.949 0.895 0.985 0.921 0.966 0.920 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
54. Y71G12B.8 ddx-27 3584 7.432 0.836 0.922 0.905 0.922 0.965 0.967 0.961 0.954 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
55. C34E10.5 prmt-5 12277 7.429 0.937 0.924 0.954 0.924 0.948 0.951 0.876 0.915 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
56. F58B3.5 mars-1 6729 7.428 0.914 0.921 0.939 0.921 0.976 0.929 0.957 0.871 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
57. F21H12.5 fbf-2 4640 7.428 0.870 0.926 0.894 0.926 0.972 0.935 0.953 0.952 Fem-3 mRNA-binding factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09312]
58. T28D9.2 rsp-5 6460 7.428 0.872 0.898 0.916 0.898 0.973 0.958 0.951 0.962 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
59. T05G5.10 iff-1 42569 7.423 0.876 0.908 0.954 0.908 0.961 0.939 0.946 0.931 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
60. K04C2.3 K04C2.3 23540 7.421 0.910 0.853 0.914 0.853 0.983 0.982 0.953 0.973
61. C26E6.4 rpb-2 7053 7.42 0.901 0.909 0.929 0.909 0.958 0.933 0.937 0.944 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
62. C34E10.2 gop-2 5684 7.419 0.887 0.899 0.930 0.899 0.990 0.936 0.939 0.939 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
63. ZC434.5 ears-1 4725 7.419 0.835 0.929 0.919 0.929 0.955 0.943 0.970 0.939 glutamyl(E) Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_492711]
64. Y54E5A.6 Y54E5A.6 770 7.418 0.880 0.881 0.930 0.881 0.986 0.938 0.948 0.974
65. F32H2.1 snpc-4 7581 7.417 0.907 0.897 0.924 0.897 0.963 0.954 0.936 0.939 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
66. C17G10.2 C17G10.2 2288 7.412 0.889 0.891 0.962 0.891 0.942 0.926 0.936 0.975
67. F44G4.2 F44G4.2 21103 7.408 0.921 0.894 0.939 0.894 0.979 0.880 0.955 0.946 Probable NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q20412]
68. F28B3.8 imb-1 7515 7.408 0.878 0.900 0.947 0.900 0.946 0.940 0.935 0.962 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
69. W06E11.4 sbds-1 6701 7.408 0.875 0.906 0.959 0.906 0.979 0.953 0.921 0.909 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
70. Y18D10A.1 attf-6 6942 7.407 0.875 0.904 0.925 0.904 0.949 0.946 0.935 0.969 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
71. Y14H12B.2 Y14H12B.2 6496 7.406 0.842 0.907 0.921 0.907 0.976 0.924 0.958 0.971
72. Y110A7A.16 elpc-1 3641 7.405 0.848 0.920 0.957 0.920 0.969 0.903 0.959 0.929 Elongator complex protein 1 [Source:RefSeq peptide;Acc:NP_491524]
73. F23F1.1 nfyc-1 9983 7.404 0.895 0.891 0.921 0.891 0.980 0.954 0.936 0.936 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
74. F18A1.8 pid-1 3751 7.403 0.917 0.906 0.950 0.906 0.985 0.950 0.910 0.879 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
75. Y111B2A.17 elpc-2 3504 7.402 0.919 0.924 0.935 0.924 0.951 0.908 0.940 0.901 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
76. Y47D3A.26 smc-3 6256 7.402 0.839 0.908 0.930 0.908 0.978 0.948 0.954 0.937 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
77. Y49E10.15 snr-6 8505 7.401 0.895 0.916 0.900 0.916 0.984 0.901 0.941 0.948 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]
78. Y40G12A.1 ubh-3 4142 7.401 0.912 0.902 0.948 0.902 0.965 0.899 0.928 0.945 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
79. C14A4.1 dohh-1 4890 7.4 0.903 0.905 0.910 0.905 0.983 0.954 0.924 0.916 Deoxyhypusine hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q17949]
80. F55A12.8 nath-10 4253 7.4 0.768 0.917 0.928 0.917 0.986 0.952 0.969 0.963 N-acetyltransferase 10 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01757]
81. F56D2.6 ddx-15 12282 7.399 0.894 0.909 0.915 0.909 0.962 0.944 0.895 0.971 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
82. ZK430.1 toe-1 2458 7.398 0.861 0.922 0.890 0.922 0.963 0.920 0.947 0.973 HEAT repeat-containing protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23495]
83. PAR2.1 mtss-1 4055 7.398 0.928 0.847 0.915 0.847 0.965 0.981 0.945 0.970 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
84. T07D4.4 ddx-19 7234 7.397 0.877 0.925 0.926 0.925 0.968 0.935 0.938 0.903 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
85. Y39E4B.2 snpc-1.2 5800 7.397 0.878 0.883 0.881 0.883 0.972 0.967 0.989 0.944 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
86. Y77E11A.6 rpc-11 2203 7.394 0.880 0.923 0.916 0.923 0.984 0.924 0.940 0.904 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_500076]
87. C25A1.3 tag-72 1861 7.393 0.897 0.920 0.920 0.920 0.966 0.930 0.951 0.889 mRNA cap guanine-N7 methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS1]
88. Y45G5AM.8 coh-4 2525 7.393 0.904 0.922 0.943 0.922 0.977 0.969 0.909 0.847 COHesin family [Source:RefSeq peptide;Acc:NP_504161]
89. ZK652.1 snr-5 5993 7.392 0.890 0.911 0.952 0.911 0.939 0.922 0.901 0.966 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
90. C05D11.10 mrps-17 4613 7.391 0.890 0.897 0.933 0.897 0.957 0.916 0.937 0.964 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
91. C27H6.3 tofu-1 2992 7.391 0.858 0.896 0.944 0.896 0.986 0.941 0.973 0.897 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
92. T21B10.1 mrpl-50 14595 7.39 0.879 0.923 0.955 0.923 0.959 0.935 0.951 0.865 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
93. Y105E8B.3 riok-2 5531 7.39 0.871 0.896 0.950 0.896 0.986 0.965 0.887 0.939 Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
94. W07E6.1 nol-1 7892 7.39 0.821 0.917 0.874 0.917 0.961 0.972 0.962 0.966 NucleOLar protein [Source:RefSeq peptide;Acc:NP_493742]
95. C05C8.5 C05C8.5 2655 7.385 0.915 0.847 0.943 0.847 0.989 0.958 0.908 0.978
96. D2023.5 mpst-1 10328 7.383 0.931 0.889 0.900 0.889 0.984 0.895 0.963 0.932 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
97. T14B4.2 T14B4.2 4487 7.383 0.931 0.919 0.932 0.919 0.944 0.934 0.957 0.847
98. C26D10.1 ran-3 11111 7.382 0.843 0.891 0.959 0.891 0.967 0.953 0.946 0.932 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
99. B0035.12 sart-3 7188 7.381 0.889 0.885 0.947 0.885 0.981 0.965 0.930 0.899 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
100. K01G5.8 K01G5.8 4694 7.381 0.877 0.858 0.934 0.858 0.962 0.954 0.971 0.967

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA