C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for W02D9.3

Gene ID Gene Name Reads Transcripts Annotation
W02D9.3 hmg-20 2693 W02D9.3 HMG [Source:RefSeq peptide;Acc:NP_493178]

Genes with expression patterns similar to W02D9.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. W02D9.3 hmg-20 2693 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HMG [Source:RefSeq peptide;Acc:NP_493178]
2. Y47D3A.26 smc-3 6256 7.672 0.933 0.973 0.979 0.973 0.974 0.952 0.968 0.920 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
3. B0414.5 cpb-3 11584 7.643 0.967 0.969 0.986 0.969 0.934 0.969 0.982 0.867 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
4. F26H9.1 prom-1 6444 7.638 0.961 0.958 0.976 0.958 0.956 0.971 0.974 0.884 PRogression Of Meiosis [Source:RefSeq peptide;Acc:NP_492477]
5. F41H10.10 htp-1 6425 7.631 0.926 0.968 0.921 0.968 0.954 0.980 0.984 0.930 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
6. C36A4.5 maph-1.3 15493 7.618 0.936 0.958 0.967 0.958 0.965 0.910 0.977 0.947 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
7. F52B5.3 F52B5.3 2077 7.61 0.930 0.961 0.982 0.961 0.938 0.946 0.988 0.904
8. C23G10.8 C23G10.8 4642 7.608 0.921 0.975 0.963 0.975 0.947 0.985 0.946 0.896
9. C05D2.5 xnd-1 5516 7.602 0.934 0.977 0.969 0.977 0.947 0.964 0.963 0.871 X chromosome NonDisjunction factor [Source:RefSeq peptide;Acc:NP_498207]
10. C25A1.4 C25A1.4 15507 7.597 0.936 0.972 0.973 0.972 0.950 0.955 0.947 0.892
11. F54D5.11 F54D5.11 2756 7.582 0.940 0.920 0.963 0.920 0.951 0.965 0.963 0.960 Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
12. M01E11.5 cey-3 20931 7.581 0.951 0.948 0.977 0.948 0.961 0.950 0.985 0.861 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
13. B0035.12 sart-3 7188 7.581 0.951 0.977 0.963 0.977 0.960 0.921 0.921 0.911 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
14. Y38C9A.2 cgp-1 11756 7.579 0.968 0.958 0.980 0.958 0.959 0.931 0.944 0.881 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
15. F46F11.2 cey-2 47143 7.572 0.933 0.947 0.940 0.947 0.946 0.975 0.975 0.909 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
16. Y41D4B.19 npp-8 12992 7.568 0.954 0.968 0.983 0.968 0.954 0.923 0.956 0.862 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
17. C04G2.6 dis-3 5048 7.566 0.942 0.979 0.969 0.979 0.944 0.888 0.941 0.924 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
18. Y18D10A.17 car-1 87364 7.564 0.948 0.947 0.973 0.947 0.959 0.949 0.970 0.871 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
19. Y41D4B.13 ced-2 10100 7.56 0.949 0.948 0.985 0.948 0.947 0.913 0.950 0.920 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
20. C18E9.3 szy-20 6819 7.56 0.942 0.950 0.977 0.950 0.944 0.937 0.956 0.904 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
21. T23G11.3 gld-1 41748 7.558 0.922 0.969 0.971 0.969 0.955 0.955 0.989 0.828 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
22. F14B4.3 rpoa-2 7549 7.555 0.922 0.967 0.964 0.967 0.962 0.918 0.953 0.902 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
23. F59A2.1 npp-9 34375 7.551 0.965 0.972 0.973 0.972 0.944 0.918 0.974 0.833 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
24. R06F6.1 cdl-1 14167 7.546 0.925 0.960 0.958 0.960 0.943 0.946 0.969 0.885 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
25. F53A2.4 nud-1 7818 7.544 0.910 0.947 0.953 0.947 0.950 0.925 0.979 0.933 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
26. Y14H12B.2 Y14H12B.2 6496 7.538 0.964 0.969 0.982 0.969 0.956 0.916 0.981 0.801
27. C34E10.2 gop-2 5684 7.533 0.946 0.964 0.954 0.964 0.929 0.930 0.958 0.888 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
28. F44G4.4 tdp-1 3335 7.529 0.930 0.953 0.946 0.953 0.935 0.929 0.972 0.911 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
29. W01A8.5 tofu-5 5678 7.528 0.930 0.971 0.953 0.971 0.947 0.940 0.978 0.838 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
30. B0336.6 abi-1 3184 7.527 0.911 0.956 0.942 0.956 0.953 0.957 0.925 0.927 ABl Interactor homolog [Source:RefSeq peptide;Acc:NP_498224]
31. F55G1.8 plk-3 12036 7.524 0.956 0.957 0.981 0.957 0.946 0.924 0.905 0.898 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
32. F21F3.6 F21F3.6 57056 7.524 0.913 0.947 0.896 0.947 0.955 0.957 0.976 0.933
33. Y113G7B.5 fog-2 2753 7.519 0.930 0.972 0.987 0.972 0.915 0.939 0.936 0.868 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
34. F26B1.3 ima-2 18826 7.515 0.944 0.956 0.976 0.956 0.944 0.890 0.973 0.876 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
35. C07H6.5 cgh-1 60576 7.509 0.913 0.934 0.967 0.934 0.968 0.955 0.978 0.860 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
36. F43G9.5 cfim-1 9169 7.509 0.934 0.951 0.967 0.951 0.950 0.913 0.972 0.871 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
37. T28D9.2 rsp-5 6460 7.506 0.970 0.970 0.970 0.970 0.944 0.946 0.934 0.802 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
38. ZK1320.12 taf-8 3558 7.506 0.953 0.977 0.969 0.977 0.931 0.956 0.863 0.880 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
39. ZK381.1 him-3 4913 7.506 0.956 0.970 0.973 0.970 0.922 0.945 0.880 0.890 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
40. Y73B6BL.2 htp-2 5257 7.506 0.943 0.936 0.961 0.936 0.919 0.940 0.973 0.898 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500981]
41. T20D3.7 vps-26 9349 7.505 0.949 0.941 0.986 0.941 0.938 0.906 0.934 0.910 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
42. C37A2.4 cye-1 4158 7.502 0.929 0.943 0.975 0.943 0.947 0.916 0.986 0.863 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
43. R09B3.1 exo-3 4401 7.499 0.960 0.943 0.982 0.943 0.928 0.944 0.963 0.836 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
44. F35H8.3 zfp-2 2599 7.499 0.938 0.904 0.973 0.904 0.906 0.969 0.988 0.917 Zinc Finger Protein [Source:RefSeq peptide;Acc:NP_496055]
45. D1007.5 D1007.5 7940 7.498 0.896 0.952 0.945 0.952 0.951 0.929 0.943 0.930
46. Y73B6BL.33 hrpf-2 4443 7.497 0.923 0.956 0.955 0.956 0.926 0.959 0.952 0.870 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
47. F33G12.4 lrr-1 3639 7.497 0.947 0.955 0.956 0.955 0.905 0.909 0.918 0.952 Leucine-Rich Repeat protein [Source:RefSeq peptide;Acc:NP_494928]
48. F45E12.2 brf-1 4667 7.497 0.949 0.974 0.966 0.974 0.971 0.901 0.946 0.816 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
49. ZK1307.6 fzr-1 8507 7.496 0.945 0.965 0.984 0.965 0.924 0.895 0.916 0.902 FiZzy Related family [Source:RefSeq peptide;Acc:NP_496075]
50. W06E11.4 sbds-1 6701 7.494 0.943 0.959 0.951 0.959 0.940 0.920 0.916 0.906 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
51. Y51H1A.4 ing-3 8617 7.494 0.939 0.946 0.971 0.946 0.941 0.933 0.914 0.904 Inhibitor of growth protein [Source:RefSeq peptide;Acc:NP_496909]
52. W02B12.11 W02B12.11 8336 7.49 0.949 0.890 0.967 0.890 0.965 0.957 0.972 0.900 N-acetyllactosamine synthase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGS9]
53. F16D3.4 tbcd-1 2159 7.485 0.939 0.961 0.944 0.961 0.935 0.929 0.910 0.906 TuBulin folding Cofactor D homolog [Source:RefSeq peptide;Acc:NP_492270]
54. Y62F5A.1 mdt-8 1838 7.484 0.917 0.931 0.975 0.931 0.934 0.929 0.915 0.952 Mediator of RNA polymerase II transcription subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9U1W2]
55. W08E3.1 snr-2 14849 7.483 0.939 0.967 0.955 0.967 0.915 0.902 0.981 0.857 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
56. K09H9.6 lpd-6 5459 7.483 0.936 0.937 0.956 0.937 0.961 0.906 0.938 0.912 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
57. C26E6.7 eri-9 8069 7.483 0.940 0.958 0.947 0.958 0.947 0.939 0.950 0.844 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
58. H20J04.8 mog-2 3084 7.477 0.931 0.961 0.941 0.961 0.937 0.910 0.940 0.896 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
59. C26B2.6 elpc-4 3600 7.477 0.899 0.948 0.952 0.948 0.946 0.948 0.959 0.877 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
60. C48B4.7 C48B4.7 4006 7.477 0.936 0.948 0.924 0.948 0.941 0.933 0.986 0.861
61. Y48G1BL.2 atm-1 1833 7.473 0.878 0.948 0.951 0.948 0.963 0.967 0.954 0.864 Serine/threonine-protein kinase ATM [Source:UniProtKB/Swiss-Prot;Acc:Q9N3Q4]
62. R03D7.7 nos-1 8407 7.473 0.938 0.961 0.941 0.961 0.955 0.954 0.971 0.792 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
63. C26D10.1 ran-3 11111 7.469 0.930 0.969 0.948 0.969 0.879 0.900 0.950 0.924 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
64. C02F5.4 cids-1 3125 7.469 0.927 0.961 0.975 0.961 0.950 0.912 0.934 0.849 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
65. F41H10.11 sand-1 5039 7.467 0.913 0.953 0.934 0.953 0.948 0.915 0.946 0.905 SAND endocytosis protein family [Source:RefSeq peptide;Acc:NP_500791]
66. Y39E4B.2 snpc-1.2 5800 7.464 0.939 0.964 0.968 0.964 0.960 0.933 0.951 0.785 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
67. K01G5.2 hpl-2 6781 7.463 0.943 0.973 0.964 0.973 0.941 0.891 0.961 0.817 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
68. C56A3.5 C56A3.5 2260 7.46 0.911 0.922 0.948 0.922 0.956 0.915 0.962 0.924
69. Y66D12A.17 such-1 1352 7.458 0.895 0.944 0.933 0.944 0.952 0.920 0.926 0.944 SUppressor of spindle CHeckpoint defect [Source:RefSeq peptide;Acc:NP_499485]
70. Y45G5AM.8 coh-4 2525 7.458 0.898 0.938 0.910 0.938 0.944 0.934 0.943 0.953 COHesin family [Source:RefSeq peptide;Acc:NP_504161]
71. F21D5.6 F21D5.6 1798 7.457 0.912 0.962 0.970 0.962 0.934 0.937 0.918 0.862
72. C41C4.6 ulp-4 13338 7.457 0.966 0.957 0.967 0.957 0.962 0.861 0.937 0.850 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
73. C14B1.4 wdr-5.1 4424 7.457 0.927 0.964 0.959 0.964 0.910 0.897 0.972 0.864 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
74. ZK418.8 tofu-7 2450 7.456 0.897 0.930 0.952 0.930 0.950 0.930 0.946 0.921 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_498547]
75. K07A12.2 egg-6 18331 7.456 0.902 0.961 0.961 0.961 0.904 0.901 0.920 0.946 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
76. F08G5.1 dsb-1 2436 7.456 0.936 0.940 0.934 0.940 0.940 0.969 0.944 0.853 Double-Strand Break factor [Source:RefSeq peptide;Acc:NP_001255642]
77. Y53C12B.3 nos-3 20231 7.454 0.946 0.970 0.969 0.970 0.935 0.899 0.950 0.815 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
78. C48D1.2 ced-3 4123 7.451 0.925 0.917 0.972 0.917 0.940 0.949 0.953 0.878 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
79. K07A1.11 rba-1 3421 7.449 0.934 0.914 0.953 0.914 0.928 0.909 0.945 0.952 Probable histone-binding protein rba-1 [Source:UniProtKB/Swiss-Prot;Acc:P90917]
80. T04A11.6 him-6 1408 7.447 0.939 0.907 0.935 0.907 0.904 0.983 0.979 0.893 Bloom syndrome protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O18017]
81. K04G7.11 K04G7.11 6153 7.446 0.927 0.953 0.956 0.953 0.954 0.947 0.965 0.791 Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
82. B0205.9 B0205.9 3651 7.446 0.930 0.959 0.944 0.959 0.899 0.906 0.961 0.888
83. T14B4.2 T14B4.2 4487 7.443 0.929 0.918 0.945 0.918 0.960 0.940 0.915 0.918
84. Y37D8A.9 mrg-1 14369 7.443 0.956 0.966 0.958 0.966 0.943 0.885 0.966 0.803 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
85. W04D2.6 W04D2.6 7330 7.442 0.959 0.966 0.958 0.966 0.936 0.932 0.891 0.834
86. F56F3.1 ifet-1 25772 7.439 0.925 0.963 0.977 0.963 0.933 0.895 0.938 0.845 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
87. F21C3.4 rde-2 6286 7.437 0.928 0.969 0.959 0.969 0.964 0.899 0.941 0.808
88. T02C12.2 snpc-3.4 1385 7.435 0.940 0.923 0.940 0.923 0.950 0.955 0.938 0.866 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_497807]
89. F59G1.5 ptp-2 7879 7.435 0.961 0.973 0.967 0.973 0.951 0.906 0.792 0.912 Tyrosine-protein phosphatase non-receptor type [Source:RefSeq peptide;Acc:NP_001293512]
90. Y71G12B.9 lin-65 7476 7.434 0.952 0.968 0.962 0.968 0.964 0.900 0.934 0.786 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
91. JC8.6 lin-54 5789 7.433 0.923 0.947 0.950 0.947 0.948 0.943 0.940 0.835
92. Y49E10.14 pie-1 7902 7.432 0.872 0.925 0.919 0.925 0.959 0.919 0.987 0.926 Pharynx and intestine in excess protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94131]
93. F32E10.1 nol-10 3225 7.431 0.908 0.958 0.966 0.958 0.920 0.963 0.917 0.841 NucleOLar protein [Source:RefSeq peptide;Acc:NP_501233]
94. H02I12.1 cbd-1 54348 7.427 0.928 0.917 0.918 0.917 0.919 0.922 0.975 0.931 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
95. C34D4.12 cyn-12 7363 7.427 0.926 0.959 0.937 0.959 0.938 0.949 0.971 0.788 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
96. Y102A5C.1 fbxa-206 1513 7.426 0.895 0.928 0.910 0.928 0.929 0.971 0.953 0.912 F-box A protein [Source:RefSeq peptide;Acc:NP_507275]
97. D1007.8 D1007.8 1265 7.425 0.952 0.939 0.983 0.939 0.946 0.913 0.931 0.822
98. F58G11.6 ccz-1 5655 7.425 0.950 0.948 0.978 0.948 0.941 0.911 0.951 0.798
99. T23D8.7 hpo-24 4372 7.424 0.890 0.925 0.956 0.925 0.918 0.920 0.975 0.915
100. C01G8.3 dhs-1 5394 7.42 0.944 0.947 0.950 0.947 0.898 0.925 0.918 0.891 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_491557]

There are 2305 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA