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Results for R53.1

Gene ID Gene Name Reads Transcripts Annotation
R53.1 flad-1 3181 R53.1a.1, R53.1a.2, R53.1b.1, R53.1b.2, R53.1c.1, R53.1c.2, R53.1d Probable FAD synthase Molybdenum cofactor biosynthesis protein-like region FAD synthase region [Source:UniProtKB/Swiss-Prot;Acc:Q22017]

Genes with expression patterns similar to R53.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R53.1 flad-1 3181 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable FAD synthase Molybdenum cofactor biosynthesis protein-like region FAD synthase region [Source:UniProtKB/Swiss-Prot;Acc:Q22017]
2. C15H11.4 dhs-22 21674 7.666 0.979 0.982 0.883 0.982 0.977 0.987 0.925 0.951 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
3. ZK616.6 perm-3 16186 7.622 0.974 0.974 0.903 0.974 0.980 0.952 0.932 0.933 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
4. K08D12.1 pbs-1 21677 7.599 0.976 0.965 0.899 0.965 0.968 0.953 0.954 0.919 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
5. F39B2.11 mtx-1 8526 7.589 0.969 0.973 0.913 0.973 0.969 0.940 0.937 0.915 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
6. T12D8.6 mlc-5 19567 7.582 0.966 0.958 0.909 0.958 0.961 0.979 0.939 0.912 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
7. Y48A6B.13 spat-2 21773 7.578 0.951 0.954 0.940 0.954 0.953 0.967 0.899 0.960 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
8. F39H11.5 pbs-7 13631 7.571 0.973 0.971 0.916 0.971 0.958 0.954 0.940 0.888 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
9. F08F8.3 kap-1 31437 7.562 0.972 0.953 0.922 0.953 0.974 0.955 0.894 0.939 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
10. R05D11.3 ran-4 15494 7.561 0.964 0.967 0.919 0.967 0.973 0.946 0.886 0.939 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
11. ZK896.9 nstp-5 7851 7.559 0.954 0.961 0.890 0.961 0.942 0.964 0.938 0.949 Nucleotide Sugar TransPorter family [Source:RefSeq peptide;Acc:NP_001255679]
12. Y113G7B.23 swsn-1 13766 7.555 0.955 0.950 0.885 0.950 0.979 0.971 0.935 0.930 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
13. K02F2.1 dpf-3 11465 7.554 0.964 0.963 0.900 0.963 0.958 0.926 0.956 0.924 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
14. C18D11.4 rsp-8 18308 7.554 0.964 0.961 0.872 0.961 0.976 0.946 0.930 0.944 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
15. F39B2.2 uev-1 13597 7.55 0.965 0.960 0.870 0.960 0.977 0.968 0.932 0.918 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
16. T10C6.4 srx-44 8454 7.55 0.978 0.969 0.897 0.969 0.976 0.933 0.932 0.896 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
17. Y56A3A.20 ccf-1 18463 7.548 0.963 0.955 0.881 0.955 0.965 0.946 0.941 0.942 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
18. C39E9.14 dli-1 5650 7.544 0.957 0.958 0.884 0.958 0.956 0.973 0.904 0.954 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
19. ZK652.3 ufm-1 12647 7.539 0.980 0.948 0.920 0.948 0.960 0.941 0.943 0.899 Ubiquitin-fold modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:P34661]
20. C50C3.6 prp-8 19582 7.537 0.953 0.943 0.925 0.943 0.988 0.940 0.918 0.927 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
21. R07G3.1 cdc-42 35737 7.537 0.977 0.970 0.899 0.970 0.965 0.932 0.901 0.923 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
22. F22D6.3 nars-1 18624 7.536 0.955 0.967 0.910 0.967 0.972 0.935 0.905 0.925 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
23. ZK20.3 rad-23 35070 7.534 0.974 0.955 0.919 0.955 0.950 0.941 0.952 0.888
24. F55C5.8 srpa-68 6665 7.533 0.954 0.959 0.855 0.959 0.975 0.956 0.942 0.933 Probable signal recognition particle subunit SRP68 [Source:UniProtKB/Swiss-Prot;Acc:Q20822]
25. T17E9.2 nmt-1 8017 7.532 0.938 0.971 0.907 0.971 0.980 0.915 0.909 0.941 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
26. Y40B1B.5 eif-3.J 15061 7.529 0.953 0.931 0.919 0.931 0.985 0.964 0.912 0.934 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
27. F38H4.9 let-92 25368 7.529 0.972 0.964 0.895 0.964 0.962 0.928 0.928 0.916 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
28. Y102A5A.1 cand-1 11808 7.525 0.930 0.962 0.904 0.962 0.962 0.969 0.927 0.909 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
29. Y57E12AM.1 Y57E12AM.1 10510 7.524 0.966 0.936 0.877 0.936 0.970 0.957 0.933 0.949 Transmembrane protein 258 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q965T1]
30. Y38A8.2 pbs-3 18117 7.519 0.973 0.961 0.871 0.961 0.953 0.958 0.947 0.895 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
31. F26F4.10 rars-1 9971 7.519 0.958 0.945 0.902 0.945 0.978 0.962 0.910 0.919 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
32. F25G6.9 F25G6.9 3071 7.518 0.951 0.921 0.910 0.921 0.969 0.974 0.947 0.925
33. C34E10.1 gop-3 11393 7.516 0.942 0.937 0.929 0.937 0.965 0.944 0.932 0.930 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
34. T12D8.3 acbp-5 6816 7.515 0.967 0.966 0.885 0.966 0.977 0.950 0.900 0.904 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
35. CD4.6 pas-6 18332 7.513 0.962 0.957 0.919 0.957 0.979 0.918 0.934 0.887 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
36. T05H4.6 erfa-1 12542 7.513 0.942 0.942 0.869 0.942 0.987 0.951 0.933 0.947 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
37. C09G12.9 tsg-101 9451 7.511 0.961 0.953 0.878 0.953 0.950 0.936 0.932 0.948 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
38. F13G3.4 dylt-1 21345 7.509 0.937 0.943 0.899 0.943 0.957 0.974 0.924 0.932 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
39. T04A8.14 emb-5 11746 7.509 0.961 0.966 0.883 0.966 0.976 0.960 0.906 0.891 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
40. C47D12.6 tars-1 23488 7.509 0.960 0.949 0.875 0.949 0.980 0.957 0.914 0.925 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
41. Y116A8C.35 uaf-2 13808 7.505 0.933 0.960 0.911 0.960 0.972 0.956 0.927 0.886 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
42. T12D8.8 hip-1 18283 7.503 0.947 0.947 0.888 0.947 0.979 0.950 0.921 0.924 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
43. B0035.6 B0035.6 7327 7.503 0.947 0.970 0.915 0.970 0.977 0.952 0.887 0.885
44. D1014.3 snap-1 16776 7.501 0.968 0.962 0.887 0.962 0.958 0.953 0.904 0.907 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
45. H19N07.1 erfa-3 19869 7.5 0.937 0.964 0.902 0.964 0.982 0.967 0.866 0.918 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
46. Y39G10AR.9 Y39G10AR.9 3972 7.497 0.929 0.948 0.887 0.948 0.973 0.956 0.931 0.925
47. F39B2.10 dnj-12 35162 7.496 0.943 0.940 0.916 0.940 0.967 0.940 0.950 0.900 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
48. Y77E11A.13 npp-20 5777 7.495 0.965 0.962 0.884 0.962 0.932 0.949 0.933 0.908 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
49. F33D11.11 vpr-1 18001 7.492 0.951 0.964 0.841 0.964 0.983 0.957 0.905 0.927 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
50. C47B2.4 pbs-2 19805 7.492 0.955 0.945 0.872 0.945 0.972 0.980 0.958 0.865 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
51. R07G3.5 pgam-5 11646 7.492 0.957 0.951 0.908 0.951 0.961 0.945 0.926 0.893 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
52. R144.4 wip-1 14168 7.488 0.940 0.948 0.900 0.948 0.968 0.973 0.892 0.919 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
53. F10D11.1 sod-2 7480 7.488 0.938 0.970 0.901 0.970 0.961 0.936 0.906 0.906 Superoxide dismutase [Mn] 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P31161]
54. K11D12.2 pqn-51 15951 7.487 0.973 0.958 0.902 0.958 0.952 0.966 0.864 0.914 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
55. Y73B6BL.6 sqd-1 41708 7.486 0.937 0.955 0.867 0.955 0.968 0.974 0.924 0.906 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
56. C25D7.8 otub-1 7941 7.485 0.966 0.956 0.909 0.956 0.939 0.963 0.865 0.931 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
57. F25D1.1 ppm-1 16992 7.484 0.971 0.957 0.908 0.957 0.956 0.929 0.883 0.923 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
58. Y48G8AL.6 smg-2 12561 7.484 0.955 0.951 0.902 0.951 0.965 0.932 0.930 0.898 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
59. C06H2.6 lmtr-3 11122 7.483 0.939 0.959 0.900 0.959 0.955 0.967 0.886 0.918 Late endosomal/lysosomal adaptor, Mapk (MAPK) and mToR (MTOR) activator homolog [Source:RefSeq peptide;Acc:NP_741627]
60. F58G11.1 letm-1 13414 7.48 0.967 0.964 0.884 0.964 0.931 0.950 0.907 0.913 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
61. Y111B2A.18 rsp-3 43731 7.48 0.983 0.946 0.879 0.946 0.969 0.939 0.922 0.896 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
62. Y54E10A.9 vbh-1 28746 7.48 0.934 0.941 0.923 0.941 0.985 0.927 0.925 0.904 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
63. K10C3.2 ensa-1 19836 7.477 0.968 0.951 0.876 0.951 0.973 0.924 0.920 0.914 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
64. B0205.7 kin-3 29775 7.477 0.947 0.948 0.881 0.948 0.965 0.960 0.942 0.886 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
65. F41E6.9 vps-60 4469 7.476 0.957 0.923 0.924 0.923 0.960 0.935 0.947 0.907 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]
66. D2089.1 rsp-7 11057 7.474 0.964 0.950 0.917 0.950 0.961 0.931 0.896 0.905 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
67. F02E9.9 dpt-1 5401 7.473 0.954 0.957 0.874 0.957 0.938 0.941 0.908 0.944 Dipeptidyl Peptidase Three [Source:RefSeq peptide;Acc:NP_001040648]
68. T10F2.4 prp-19 11298 7.471 0.967 0.959 0.900 0.959 0.971 0.900 0.907 0.908 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
69. ZC395.3 toc-1 6437 7.467 0.961 0.951 0.880 0.951 0.924 0.968 0.916 0.916 similar to Transporter Of divalent Cations [Source:RefSeq peptide;Acc:NP_001033385]
70. T27F7.3 eif-1 28176 7.466 0.917 0.923 0.888 0.923 0.969 0.963 0.945 0.938 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
71. Y67D8C.5 eel-1 30623 7.466 0.930 0.931 0.919 0.931 0.968 0.947 0.914 0.926 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
72. Y65B4A.3 vps-20 8612 7.464 0.940 0.929 0.926 0.929 0.937 0.961 0.890 0.952 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_490762]
73. M7.1 let-70 85699 7.463 0.941 0.946 0.902 0.946 0.948 0.964 0.925 0.891 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
74. ZK637.3 lnkn-1 16095 7.462 0.976 0.966 0.907 0.966 0.919 0.963 0.843 0.922 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
75. C52E12.3 sqv-7 5356 7.462 0.946 0.960 0.844 0.960 0.982 0.949 0.942 0.879 UDP-sugar transporter sqv-7 [Source:UniProtKB/Swiss-Prot;Acc:Q18779]
76. ZK858.1 gld-4 14162 7.461 0.972 0.941 0.906 0.941 0.977 0.934 0.885 0.905 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
77. Y71D11A.2 smr-1 4976 7.461 0.947 0.963 0.898 0.963 0.972 0.927 0.931 0.860 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
78. C53A5.3 hda-1 18413 7.461 0.968 0.965 0.898 0.965 0.926 0.968 0.820 0.951 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
79. F59B2.7 rab-6.1 10749 7.46 0.970 0.954 0.905 0.954 0.963 0.899 0.942 0.873 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
80. T05F1.6 hsr-9 13312 7.46 0.971 0.958 0.901 0.958 0.990 0.887 0.886 0.909
81. F40G9.3 ubc-20 16785 7.459 0.957 0.946 0.889 0.946 0.954 0.927 0.931 0.909 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
82. F54C8.5 rheb-1 6358 7.457 0.967 0.951 0.902 0.951 0.936 0.938 0.877 0.935 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
83. Y110A7A.14 pas-3 6831 7.455 0.962 0.971 0.876 0.971 0.950 0.943 0.924 0.858 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
84. K04G2.1 iftb-1 12590 7.454 0.942 0.940 0.901 0.940 0.960 0.941 0.938 0.892 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
85. B0511.10 eif-3.E 10041 7.453 0.926 0.953 0.861 0.953 0.933 0.960 0.949 0.918 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
86. F26E4.11 hrdl-1 14721 7.453 0.927 0.960 0.863 0.960 0.974 0.955 0.878 0.936 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
87. F36A4.7 ama-1 13620 7.451 0.896 0.953 0.928 0.953 0.987 0.941 0.900 0.893 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
88. F23B12.6 fntb-1 4392 7.451 0.954 0.954 0.871 0.954 0.963 0.944 0.871 0.940 FarNesylTransferase, Beta subunit [Source:RefSeq peptide;Acc:NP_506580]
89. Y18D10A.20 pfn-1 33871 7.449 0.951 0.963 0.898 0.963 0.962 0.957 0.916 0.839 Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XW16]
90. Y47G6A.20 rnp-6 5542 7.448 0.950 0.960 0.894 0.960 0.942 0.931 0.906 0.905 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
91. T19A6.3 nepr-1 6606 7.448 0.967 0.951 0.901 0.951 0.925 0.951 0.883 0.919 Nuclear envelope phosphatase-regulatory subunit 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXN3]
92. T01G1.3 sec-31 10504 7.448 0.945 0.952 0.883 0.952 0.980 0.954 0.902 0.880 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
93. T12E12.4 drp-1 7694 7.447 0.988 0.953 0.907 0.953 0.944 0.946 0.893 0.863 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
94. F45H11.2 ned-8 13247 7.446 0.935 0.947 0.892 0.947 0.971 0.919 0.912 0.923 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
95. C33H5.17 zgpa-1 7873 7.445 0.957 0.953 0.895 0.953 0.965 0.939 0.892 0.891 Zinc finger G-PAtch domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_501296]
96. F28B3.7 him-1 18274 7.444 0.940 0.937 0.923 0.937 0.968 0.946 0.903 0.890 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
97. C17E4.5 pabp-2 12843 7.442 0.954 0.955 0.930 0.955 0.940 0.925 0.934 0.849 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
98. R06A4.9 pfs-2 4733 7.438 0.942 0.950 0.914 0.950 0.954 0.913 0.881 0.934 Polyadenylation Factor Subunit homolog [Source:RefSeq peptide;Acc:NP_001293597]
99. Y39G8C.1 xrn-1 7488 7.435 0.941 0.943 0.897 0.943 0.930 0.974 0.916 0.891 5'-3' exoribonuclease 1 [Source:RefSeq peptide;Acc:NP_496945]
100. T08B2.9 fars-1 12650 7.435 0.933 0.954 0.881 0.954 0.914 0.977 0.896 0.926 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA