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Results for R05D11.6

Gene ID Gene Name Reads Transcripts Annotation
R05D11.6 paxt-1 2206 R05D11.6.1, R05D11.6.2 PArtner of Xrn-2 (Two) [Source:RefSeq peptide;Acc:NP_492325]

Genes with expression patterns similar to R05D11.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R05D11.6 paxt-1 2206 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PArtner of Xrn-2 (Two) [Source:RefSeq peptide;Acc:NP_492325]
2. F16D3.2 rsd-6 8211 7.656 0.955 0.970 0.951 0.970 0.969 0.969 0.918 0.954
3. F58B6.3 par-2 3914 7.607 0.962 0.953 0.912 0.953 0.990 0.968 0.910 0.959
4. T05F1.6 hsr-9 13312 7.595 0.952 0.966 0.899 0.966 0.946 0.944 0.961 0.961
5. T06D8.6 cchl-1 26292 7.589 0.978 0.950 0.904 0.950 0.982 0.964 0.915 0.946 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
6. Y47G6A.20 rnp-6 5542 7.585 0.966 0.947 0.911 0.947 0.972 0.979 0.930 0.933 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
7. T01G9.4 npp-2 5361 7.584 0.963 0.952 0.951 0.952 0.954 0.939 0.933 0.940 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
8. B0025.2 csn-2 5205 7.575 0.935 0.968 0.926 0.968 0.951 0.943 0.931 0.953 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
9. D1081.9 D1081.9 3792 7.573 0.953 0.912 0.932 0.912 0.975 0.968 0.961 0.960
10. C36B1.3 rpb-3 4442 7.57 0.964 0.973 0.931 0.973 0.949 0.971 0.925 0.884 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
11. T12D8.3 acbp-5 6816 7.568 0.974 0.964 0.919 0.964 0.932 0.969 0.938 0.908 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
12. K12D12.1 top-2 18694 7.568 0.959 0.953 0.882 0.953 0.977 0.957 0.930 0.957 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
13. W03F9.5 ttb-1 8682 7.567 0.965 0.951 0.916 0.951 0.955 0.963 0.949 0.917 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
14. F18E2.3 scc-3 13464 7.565 0.945 0.951 0.920 0.951 0.971 0.969 0.942 0.916 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
15. C09G4.3 cks-1 17852 7.564 0.972 0.960 0.879 0.960 0.955 0.954 0.949 0.935 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
16. C18G1.5 hil-4 21692 7.558 0.966 0.968 0.907 0.968 0.912 0.933 0.944 0.960 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
17. T10C6.4 srx-44 8454 7.558 0.963 0.934 0.954 0.934 0.961 0.983 0.926 0.903 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
18. C03D6.4 npp-14 4889 7.553 0.914 0.954 0.947 0.954 0.963 0.963 0.922 0.936 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
19. Y113G7B.23 swsn-1 13766 7.548 0.974 0.966 0.880 0.966 0.936 0.955 0.929 0.942 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
20. T10F2.4 prp-19 11298 7.542 0.957 0.951 0.935 0.951 0.936 0.963 0.915 0.934 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
21. T21B10.5 set-17 5292 7.538 0.951 0.953 0.908 0.953 0.974 0.966 0.930 0.903 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_495902]
22. D2089.1 rsp-7 11057 7.538 0.944 0.942 0.920 0.942 0.980 0.989 0.901 0.920 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
23. W01B6.9 ndc-80 4670 7.534 0.955 0.954 0.892 0.954 0.963 0.958 0.934 0.924 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
24. Y71D11A.2 smr-1 4976 7.533 0.969 0.916 0.941 0.916 0.975 0.971 0.922 0.923 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
25. C06E7.1 sams-3 26921 7.533 0.924 0.949 0.898 0.949 0.955 0.939 0.961 0.958 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
26. F41E6.4 smk-1 22394 7.532 0.918 0.946 0.950 0.946 0.965 0.968 0.929 0.910 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
27. F56A8.6 cpf-2 2730 7.53 0.949 0.929 0.921 0.929 0.948 0.976 0.903 0.975 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
28. Y71G12B.1 chaf-2 3451 7.529 0.963 0.960 0.858 0.960 0.969 0.947 0.946 0.926 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
29. T12D8.8 hip-1 18283 7.523 0.951 0.946 0.903 0.946 0.964 0.943 0.936 0.934 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
30. Y110A7A.8 prp-31 4436 7.522 0.948 0.939 0.917 0.939 0.930 0.979 0.918 0.952 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
31. Y111B2A.18 rsp-3 43731 7.521 0.983 0.972 0.906 0.972 0.938 0.911 0.933 0.906 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
32. R01H2.6 ubc-18 13394 7.52 0.960 0.960 0.923 0.960 0.946 0.946 0.926 0.899 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
33. F52B5.5 cep-1 2194 7.52 0.936 0.934 0.938 0.934 0.947 0.964 0.956 0.911 Transcription factor cep-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20646]
34. T12D8.2 drr-2 16208 7.519 0.948 0.921 0.900 0.921 0.981 0.965 0.940 0.943 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
35. C25A1.5 C25A1.5 9135 7.519 0.975 0.928 0.880 0.928 0.961 0.975 0.923 0.949
36. K02F2.1 dpf-3 11465 7.519 0.966 0.963 0.898 0.963 0.964 0.975 0.882 0.908 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
37. F10B5.6 emb-27 2578 7.517 0.948 0.945 0.933 0.945 0.971 0.972 0.862 0.941 APC6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG38]
38. Y61A9LA.8 sut-2 11388 7.516 0.935 0.948 0.900 0.948 0.959 0.955 0.944 0.927 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
39. K08D12.1 pbs-1 21677 7.515 0.975 0.973 0.920 0.973 0.933 0.935 0.871 0.935 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
40. ZC395.8 ztf-8 5521 7.512 0.944 0.916 0.924 0.916 0.979 0.978 0.948 0.907 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
41. D1054.14 prp-38 6504 7.512 0.934 0.959 0.912 0.959 0.968 0.974 0.884 0.922 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
42. Y73F8A.34 tag-349 7966 7.512 0.975 0.933 0.893 0.933 0.938 0.975 0.924 0.941
43. Y49E10.19 ani-1 12757 7.512 0.961 0.961 0.908 0.961 0.945 0.942 0.885 0.949 Anillin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT4]
44. C50C3.6 prp-8 19582 7.51 0.938 0.951 0.890 0.951 0.957 0.966 0.900 0.957 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
45. C53D5.6 imb-3 28921 7.509 0.920 0.953 0.887 0.953 0.962 0.934 0.969 0.931 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
46. Y116A8C.35 uaf-2 13808 7.509 0.940 0.947 0.924 0.947 0.961 0.927 0.925 0.938 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
47. Y55D9A.1 efa-6 10012 7.506 0.960 0.928 0.919 0.928 0.956 0.963 0.931 0.921 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
48. B0252.4 cyn-10 3765 7.505 0.977 0.955 0.844 0.955 0.926 0.961 0.949 0.938 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
49. F28B3.7 him-1 18274 7.503 0.933 0.943 0.926 0.943 0.945 0.965 0.962 0.886 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
50. C39E9.13 rfc-3 9443 7.501 0.962 0.963 0.888 0.963 0.952 0.921 0.940 0.912 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
51. K02F3.11 rnp-5 6205 7.5 0.983 0.967 0.923 0.967 0.948 0.940 0.889 0.883 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
52. T20B12.2 tbp-1 9014 7.5 0.975 0.933 0.909 0.933 0.973 0.950 0.918 0.909 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
53. K11D2.3 unc-101 5587 7.499 0.933 0.962 0.926 0.962 0.972 0.951 0.845 0.948 AP-1 complex subunit mu-1-I [Source:UniProtKB/Swiss-Prot;Acc:P35602]
54. Y71F9B.16 dnj-30 4262 7.497 0.938 0.928 0.896 0.928 0.969 0.973 0.942 0.923 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
55. T07D4.3 rha-1 5898 7.497 0.911 0.942 0.938 0.942 0.978 0.954 0.910 0.922 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
56. Y54G9A.6 bub-3 9123 7.496 0.976 0.955 0.924 0.955 0.942 0.923 0.906 0.915 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
57. K10C3.2 ensa-1 19836 7.496 0.984 0.961 0.904 0.961 0.919 0.942 0.920 0.905 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
58. F35G12.8 smc-4 6202 7.496 0.930 0.938 0.927 0.938 0.952 0.982 0.882 0.947 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
59. B0205.1 B0205.1 2403 7.495 0.967 0.944 0.905 0.944 0.959 0.964 0.890 0.922
60. Y47G6A.8 crn-1 3494 7.493 0.944 0.961 0.892 0.961 0.937 0.960 0.941 0.897 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
61. C18D11.4 rsp-8 18308 7.492 0.964 0.950 0.867 0.950 0.950 0.952 0.939 0.920 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
62. C49C3.7 C49C3.7 3004 7.492 0.960 0.962 0.918 0.962 0.968 0.942 0.906 0.874
63. T09A5.8 cec-3 5813 7.491 0.921 0.970 0.899 0.970 0.900 0.970 0.944 0.917 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
64. F58A4.8 tbg-1 2839 7.49 0.949 0.929 0.902 0.929 0.974 0.976 0.933 0.898 Tubulin gamma chain [Source:UniProtKB/Swiss-Prot;Acc:P34475]
65. C17E4.5 pabp-2 12843 7.49 0.958 0.942 0.901 0.942 0.962 0.963 0.891 0.931 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
66. T21D12.3 pqbp-1.1 5755 7.49 0.963 0.944 0.930 0.944 0.923 0.970 0.952 0.864 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
67. K04C2.4 brd-1 2439 7.489 0.950 0.934 0.959 0.934 0.917 0.960 0.895 0.940 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
68. T20G5.11 rde-4 3966 7.488 0.941 0.916 0.938 0.916 0.916 0.979 0.947 0.935 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
69. F38H4.7 tag-30 4315 7.488 0.942 0.945 0.909 0.945 0.926 0.965 0.922 0.934
70. C50A2.2 cec-2 4169 7.487 0.956 0.949 0.894 0.949 0.959 0.944 0.906 0.930 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
71. C08B11.5 sap-49 10553 7.486 0.972 0.959 0.870 0.959 0.932 0.952 0.936 0.906 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
72. W02B12.3 rsp-1 9235 7.485 0.965 0.964 0.929 0.964 0.882 0.922 0.951 0.908 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
73. F10G8.3 rae-1 7542 7.484 0.923 0.963 0.910 0.963 0.949 0.975 0.928 0.873 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
74. B0035.3 B0035.3 4118 7.482 0.977 0.965 0.898 0.965 0.893 0.962 0.933 0.889
75. CD4.6 pas-6 18332 7.481 0.972 0.956 0.915 0.956 0.930 0.943 0.886 0.923 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
76. R07G3.3 npp-21 3792 7.48 0.868 0.950 0.949 0.950 0.949 0.972 0.920 0.922 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
77. F26F4.10 rars-1 9971 7.478 0.952 0.908 0.913 0.908 0.954 0.964 0.940 0.939 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
78. C09H10.6 nasp-1 6094 7.477 0.973 0.964 0.932 0.964 0.919 0.939 0.879 0.907 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
79. Y81G3A.3 gcn-2 5831 7.477 0.953 0.935 0.861 0.935 0.962 0.985 0.881 0.965 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
80. F39B2.10 dnj-12 35162 7.477 0.939 0.959 0.880 0.959 0.960 0.974 0.918 0.888 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
81. C27B7.1 spr-2 14958 7.477 0.983 0.949 0.916 0.949 0.901 0.947 0.916 0.916 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
82. T10F2.3 ulp-1 8351 7.477 0.906 0.941 0.892 0.941 0.963 0.956 0.927 0.951 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
83. R11A8.7 R11A8.7 15531 7.477 0.912 0.952 0.894 0.952 0.915 0.955 0.966 0.931 Ankyrin repeat and KH domain-containing protein R11A8.7 [Source:UniProtKB/Swiss-Prot;Acc:Q21920]
84. ZK1127.12 ZK1127.12 2029 7.476 0.947 0.950 0.902 0.950 0.940 0.964 0.933 0.890
85. F43E2.2 rpb-4 2812 7.476 0.970 0.936 0.878 0.936 0.953 0.945 0.936 0.922 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_495544]
86. ZK858.1 gld-4 14162 7.476 0.963 0.934 0.923 0.934 0.950 0.974 0.871 0.927 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
87. F56D1.7 daz-1 23684 7.475 0.938 0.937 0.900 0.937 0.929 0.950 0.960 0.924 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
88. Y43F8C.14 ani-3 3013 7.475 0.942 0.932 0.896 0.932 0.947 0.932 0.926 0.968 Anillin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWN6]
89. B0495.6 moa-2 6366 7.475 0.970 0.915 0.920 0.915 0.947 0.946 0.909 0.953
90. Y49E10.3 pph-4.2 8662 7.475 0.947 0.952 0.911 0.952 0.943 0.954 0.914 0.902 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
91. F58G11.1 letm-1 13414 7.474 0.967 0.952 0.872 0.952 0.947 0.953 0.892 0.939 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
92. F39H11.5 pbs-7 13631 7.473 0.948 0.942 0.895 0.942 0.958 0.949 0.903 0.936 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
93. F42A6.7 hrp-1 28201 7.472 0.968 0.965 0.881 0.965 0.919 0.925 0.923 0.926 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
94. F31D4.3 fkb-6 21313 7.472 0.947 0.931 0.896 0.931 0.980 0.948 0.911 0.928 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
95. ZC518.3 ccr-4 15531 7.472 0.963 0.949 0.927 0.949 0.947 0.917 0.942 0.878 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
96. F35B12.5 sas-5 4606 7.472 0.942 0.929 0.925 0.929 0.963 0.937 0.927 0.920 Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
97. Y105E8A.17 ekl-4 4732 7.471 0.926 0.928 0.913 0.928 0.967 0.947 0.910 0.952
98. ZK328.5 npp-10 7652 7.471 0.957 0.944 0.875 0.944 0.965 0.964 0.925 0.897 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
99. Y102A5A.1 cand-1 11808 7.471 0.904 0.956 0.898 0.956 0.951 0.942 0.929 0.935 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
100. T06D8.8 rpn-9 11282 7.469 0.968 0.917 0.900 0.917 0.946 0.955 0.945 0.921 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA