C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F29A7.8

Gene ID Gene Name Reads Transcripts Annotation
F29A7.8 F29A7.8 0 F29A7.8

Genes with expression patterns similar to F29A7.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F29A7.8 F29A7.8 0 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000
2. Y116A8C.42 snr-1 17062 5.687 0.929 - 0.905 - 0.990 0.984 0.931 0.948 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
3. C27B7.6 C27B7.6 983 5.683 0.925 - 0.914 - 0.967 0.979 0.955 0.943 Putative serine/threonine-protein phosphatase C27B7.6 [Source:UniProtKB/Swiss-Prot;Acc:P48460]
4. T28D9.10 snr-3 9995 5.671 0.952 - 0.886 - 0.974 0.971 0.922 0.966 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
5. B0285.6 B0285.6 0 5.662 0.968 - 0.914 - 0.929 0.942 0.939 0.970 Uncharacterized transporter B0285.6 [Source:UniProtKB/Swiss-Prot;Acc:P46556]
6. F33A8.6 F33A8.6 0 5.659 0.929 - 0.912 - 0.987 0.970 0.912 0.949
7. C56A3.6 C56A3.6 3709 5.658 0.936 - 0.898 - 0.983 0.959 0.930 0.952
8. C01F6.8 icln-1 6586 5.655 0.917 - 0.927 - 0.990 0.974 0.935 0.912 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
9. Y37E3.15 npp-13 7250 5.653 0.898 - 0.925 - 0.979 0.937 0.952 0.962 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
10. ZC395.11 ZC395.11 0 5.648 0.935 - 0.910 - 0.948 0.949 0.939 0.967
11. Y54E10A.11 Y54E10A.11 2415 5.648 0.940 - 0.916 - 0.952 0.967 0.928 0.945 E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
12. Y73B6BL.32 lsm-8 11002 5.648 0.944 - 0.936 - 0.970 0.946 0.952 0.900 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
13. T10G3.6 gut-2 3374 5.647 0.943 - 0.924 - 0.969 0.975 0.956 0.880
14. C06A1.5 rpb-6 7515 5.647 0.926 - 0.913 - 0.974 0.986 0.925 0.923 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
15. D2023.5 mpst-1 10328 5.644 0.939 - 0.909 - 0.979 0.961 0.925 0.931 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
16. Y56A3A.19 Y56A3A.19 9680 5.644 0.910 - 0.927 - 0.958 0.967 0.938 0.944 Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
17. Y48A6B.7 Y48A6B.7 2873 5.64 0.916 - 0.911 - 0.959 0.974 0.929 0.951
18. Y54E10A.7 mrpl-17 2791 5.638 0.938 - 0.948 - 0.936 0.936 0.917 0.963 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_491114]
19. Y56A3A.11 tsen-2 3247 5.638 0.944 - 0.906 - 0.948 0.983 0.945 0.912 Trna (tRNA) Splicing ENdonuclease subunit related [Source:RefSeq peptide;Acc:NP_499543]
20. F59A2.1 npp-9 34375 5.632 0.888 - 0.919 - 0.960 0.969 0.943 0.953 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
21. Y62E10A.11 mdt-9 5971 5.63 0.941 - 0.916 - 0.975 0.969 0.937 0.892 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
22. R07E5.14 rnp-4 11659 5.63 0.946 - 0.890 - 0.985 0.956 0.892 0.961 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
23. W01G7.3 rpb-11 7826 5.628 0.951 - 0.918 - 0.922 0.970 0.907 0.960 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
24. T28D9.3 T28D9.3 461 5.627 0.924 - 0.868 - 0.972 0.971 0.930 0.962
25. F55H2.6 clu-1 21404 5.626 0.878 - 0.876 - 0.961 0.971 0.960 0.980 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
26. H20J04.8 mog-2 3084 5.625 0.968 - 0.933 - 0.972 0.947 0.892 0.913 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
27. Y54E5A.4 npp-4 6288 5.625 0.918 - 0.921 - 0.946 0.939 0.938 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
28. T14B4.3 T14B4.3 2875 5.624 0.957 - 0.935 - 0.925 0.963 0.891 0.953
29. Y55F3AM.1 mrps-25 4611 5.623 0.929 - 0.904 - 0.962 0.969 0.905 0.954 Probable 28S ribosomal protein S25, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9N361]
30. T28D9.2 rsp-5 6460 5.623 0.902 - 0.912 - 0.967 0.960 0.931 0.951 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
31. F58B3.5 mars-1 6729 5.623 0.896 - 0.910 - 0.971 0.970 0.928 0.948 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
32. C26D10.1 ran-3 11111 5.62 0.894 - 0.929 - 0.979 0.972 0.959 0.887 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
33. T05B9.2 T05B9.2 0 5.62 0.922 - 0.934 - 0.964 0.970 0.906 0.924
34. B0511.7 B0511.7 1070 5.62 0.921 - 0.912 - 0.931 0.973 0.923 0.960
35. Y113G7B.5 fog-2 2753 5.62 0.919 - 0.935 - 0.973 0.942 0.950 0.901 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
36. T10B5.4 T10B5.4 0 5.62 0.917 - 0.920 - 0.963 0.959 0.928 0.933
37. W06H3.3 ctps-1 8363 5.619 0.963 - 0.878 - 0.976 0.967 0.903 0.932 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
38. Y50D7A.9 taco-1 5949 5.619 0.921 - 0.873 - 0.968 0.959 0.937 0.961 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
39. M28.8 M28.8 490 5.619 0.947 - 0.905 - 0.951 0.968 0.917 0.931
40. Y37D8A.11 cec-7 8801 5.619 0.900 - 0.915 - 0.962 0.971 0.933 0.938 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
41. B0303.15 mrpl-11 9889 5.618 0.934 - 0.926 - 0.950 0.949 0.902 0.957 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
42. T01C3.3 T01C3.3 7207 5.618 0.940 - 0.915 - 0.964 0.936 0.938 0.925
43. C47B2.9 C47B2.9 4096 5.618 0.953 - 0.904 - 0.936 0.976 0.906 0.943
44. C05C8.5 C05C8.5 2655 5.616 0.932 - 0.938 - 0.967 0.946 0.911 0.922
45. W04C9.5 W04C9.5 0 5.613 0.911 - 0.936 - 0.936 0.974 0.922 0.934
46. W08E3.1 snr-2 14849 5.613 0.944 - 0.906 - 0.946 0.979 0.911 0.927 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
47. F33D4.5 mrpl-1 5337 5.613 0.920 - 0.911 - 0.950 0.951 0.922 0.959 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
48. F56B3.8 mrpl-2 3195 5.611 0.911 - 0.895 - 0.985 0.964 0.912 0.944 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
49. F10E9.7 F10E9.7 1842 5.61 0.938 - 0.922 - 0.960 0.940 0.918 0.932
50. Y53C12B.3 nos-3 20231 5.61 0.897 - 0.942 - 0.974 0.928 0.907 0.962 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
51. T01E8.6 mrps-14 9328 5.609 0.950 - 0.893 - 0.953 0.967 0.902 0.944 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
52. T28A8.5 T28A8.5 0 5.607 0.911 - 0.935 - 0.946 0.957 0.919 0.939
53. F58D5.1 hrp-2 17211 5.606 0.927 - 0.895 - 0.929 0.951 0.933 0.971 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
54. C08F8.1 pfd-1 10199 5.606 0.955 - 0.884 - 0.957 0.958 0.941 0.911 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
55. T04A8.7 T04A8.7 0 5.606 0.925 - 0.904 - 0.942 0.967 0.929 0.939
56. K11H3.6 mrpl-36 7328 5.605 0.935 - 0.871 - 0.966 0.985 0.901 0.947 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
57. Y18D10A.21 Y18D10A.21 874 5.604 0.951 - 0.901 - 0.929 0.932 0.966 0.925
58. F31C3.5 psf-2 1813 5.603 0.969 - 0.890 - 0.885 0.973 0.963 0.923 Probable DNA replication complex GINS protein PSF2 [Source:UniProtKB/Swiss-Prot;Acc:O62193]
59. B0464.7 baf-1 10161 5.603 0.952 - 0.884 - 0.965 0.937 0.908 0.957 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
60. K08F4.2 gtbp-1 25222 5.602 0.909 - 0.893 - 0.959 0.958 0.916 0.967 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
61. F59E12.11 sam-4 8179 5.601 0.920 - 0.913 - 0.963 0.954 0.905 0.946
62. B0205.11 mrpl-9 9162 5.601 0.928 - 0.950 - 0.958 0.923 0.910 0.932 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
63. T12E12.2 cec-6 4758 5.601 0.871 - 0.941 - 0.948 0.969 0.955 0.917 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
64. Y54G11A.14 Y54G11A.14 87 5.601 0.919 - 0.912 - 0.946 0.963 0.903 0.958
65. R12C12.2 ran-5 14517 5.6 0.907 - 0.931 - 0.965 0.933 0.927 0.937 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
66. F28C6.3 cpf-1 1583 5.599 0.922 - 0.909 - 0.896 0.986 0.934 0.952 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_495822]
67. F58E10.3 ddx-17 15107 5.599 0.889 - 0.936 - 0.934 0.962 0.907 0.971 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
68. E04D5.2 E04D5.2 0 5.599 0.885 - 0.890 - 0.944 0.968 0.958 0.954
69. C27F2.6 C27F2.6 104 5.598 0.936 - 0.884 - 0.972 0.952 0.933 0.921
70. Y77E11A.6 rpc-11 2203 5.598 0.929 - 0.877 - 0.965 0.955 0.912 0.960 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_500076]
71. Y18D10A.16 Y18D10A.16 2881 5.598 0.909 - 0.919 - 0.958 0.964 0.925 0.923
72. C27H6.3 tofu-1 2992 5.596 0.890 - 0.927 - 0.987 0.975 0.896 0.921 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
73. Y116A8C.34 cyn-13 2972 5.596 0.925 - 0.883 - 0.939 0.951 0.959 0.939 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
74. PAR2.1 mtss-1 4055 5.596 0.940 - 0.858 - 0.935 0.956 0.952 0.955 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
75. F13G3.11 mrpl-13 6024 5.596 0.935 - 0.836 - 0.977 0.961 0.953 0.934 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
76. F10E7.9 F10E7.9 1268 5.595 0.934 - 0.878 - 0.952 0.967 0.933 0.931
77. B0238.12 B0238.12 1300 5.594 0.923 - 0.879 - 0.931 0.978 0.926 0.957
78. Y54E5A.6 Y54E5A.6 770 5.593 0.932 - 0.927 - 0.961 0.974 0.859 0.940
79. T23H2.1 npp-12 12425 5.591 0.899 - 0.918 - 0.965 0.975 0.909 0.925 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
80. E02H1.8 mrpl-53 2704 5.591 0.980 - 0.881 - 0.954 0.943 0.923 0.910 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001022058]
81. F23F1.1 nfyc-1 9983 5.591 0.902 - 0.922 - 0.952 0.979 0.879 0.957 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
82. C27A2.5 C27A2.5 0 5.59 0.937 - 0.912 - 0.982 0.940 0.877 0.942
83. Y62E10A.12 lsm-3 4322 5.59 0.950 - 0.944 - 0.932 0.961 0.880 0.923 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
84. ZK1128.6 ttll-4 6059 5.59 0.898 - 0.906 - 0.966 0.964 0.914 0.942 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
85. F28H1.3 aars-2 13537 5.589 0.894 - 0.909 - 0.955 0.960 0.913 0.958 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
86. D2030.4 D2030.4 13261 5.588 0.918 - 0.943 - 0.969 0.959 0.901 0.898 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:P90789]
87. F43G9.9 cpn-1 14505 5.587 0.912 - 0.935 - 0.938 0.953 0.900 0.949 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
88. C26E6.4 rpb-2 7053 5.586 0.885 - 0.903 - 0.947 0.966 0.920 0.965 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
89. Y17G7A.1 hmg-12 29989 5.585 0.912 - 0.927 - 0.958 0.984 0.881 0.923 HMG [Source:RefSeq peptide;Acc:NP_496544]
90. Y65B4BL.4 Y65B4BL.4 0 5.585 0.896 - 0.943 - 0.965 0.938 0.912 0.931
91. Y69A2AR.22 Y69A2AR.22 4538 5.584 0.957 - 0.909 - 0.886 0.945 0.917 0.970
92. Y37D8A.9 mrg-1 14369 5.584 0.877 - 0.876 - 0.976 0.978 0.916 0.961 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
93. Y71H2B.4 Y71H2B.4 24675 5.584 0.872 - 0.923 - 0.976 0.933 0.955 0.925
94. T03D8.2 mrps-12 8253 5.584 0.881 - 0.899 - 0.955 0.979 0.906 0.964 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
95. C01G10.9 C01G10.9 0 5.584 0.935 - 0.914 - 0.890 0.968 0.920 0.957 Methylthioribose-1-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q93169]
96. K01G5.4 ran-1 32379 5.584 0.921 - 0.876 - 0.929 0.964 0.928 0.966 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
97. F18A1.8 pid-1 3751 5.583 0.921 - 0.920 - 0.977 0.944 0.951 0.870 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
98. F56D12.5 vig-1 42594 5.583 0.925 - 0.867 - 0.946 0.953 0.921 0.971 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
99. Y23H5B.6 Y23H5B.6 5886 5.583 0.901 - 0.908 - 0.962 0.977 0.877 0.958
100. Y49E10.15 snr-6 8505 5.582 0.949 - 0.834 - 0.976 0.958 0.929 0.936 Probable small nuclear ribonucleoprotein E [Source:UniProtKB/Swiss-Prot;Acc:Q9XTU6]

There are 981 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA