C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F17C11.8

Gene ID Gene Name Reads Transcripts Annotation
F17C11.8 vps-36 3882 F17C11.8.1, F17C11.8.2 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505798]

Genes with expression patterns similar to F17C11.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F17C11.8 vps-36 3882 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505798]
2. C33H5.17 zgpa-1 7873 7.419 0.916 0.935 0.946 0.935 0.985 0.963 0.853 0.886 Zinc finger G-PAtch domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_501296]
3. C02F4.1 ced-5 9096 7.412 0.856 0.959 0.945 0.959 0.970 0.950 0.870 0.903 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
4. F25D1.1 ppm-1 16992 7.403 0.913 0.929 0.951 0.929 0.966 0.949 0.852 0.914 Protein Phosphatase, Mg2+/Mn2+ dependent [Source:RefSeq peptide;Acc:NP_001122929]
5. T27C4.4 lin-40 16565 7.39 0.867 0.939 0.933 0.939 0.970 0.944 0.875 0.923
6. C10C6.6 catp-8 8079 7.387 0.866 0.955 0.909 0.955 0.983 0.940 0.879 0.900 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
7. K10B2.1 lin-23 15896 7.382 0.889 0.949 0.956 0.949 0.955 0.954 0.851 0.879 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
8. F52C9.8 pqe-1 7546 7.374 0.862 0.954 0.944 0.954 0.976 0.954 0.847 0.883 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
9. Y111B2A.11 epc-1 8915 7.371 0.893 0.938 0.927 0.938 0.970 0.973 0.851 0.881 Enhancer of PolyComb-like [Source:RefSeq peptide;Acc:NP_499642]
10. K08D12.1 pbs-1 21677 7.363 0.947 0.934 0.961 0.934 0.968 0.936 0.809 0.874 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
11. F39B2.10 dnj-12 35162 7.359 0.916 0.936 0.937 0.936 0.973 0.934 0.841 0.886 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
12. K01C8.10 cct-4 15077 7.359 0.923 0.938 0.905 0.938 0.972 0.950 0.825 0.908 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
13. Y38A8.2 pbs-3 18117 7.353 0.909 0.948 0.934 0.948 0.967 0.942 0.822 0.883 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
14. CD4.6 pas-6 18332 7.345 0.929 0.943 0.962 0.943 0.955 0.944 0.828 0.841 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
15. D2089.1 rsp-7 11057 7.344 0.881 0.949 0.961 0.949 0.975 0.921 0.854 0.854 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
16. F33D11.11 vpr-1 18001 7.342 0.899 0.947 0.890 0.947 0.975 0.942 0.804 0.938 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
17. K02F2.1 dpf-3 11465 7.337 0.890 0.931 0.944 0.931 0.976 0.935 0.837 0.893 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
18. F38H4.9 let-92 25368 7.334 0.926 0.946 0.920 0.946 0.960 0.931 0.800 0.905 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
19. F41E6.4 smk-1 22394 7.333 0.873 0.946 0.947 0.946 0.977 0.948 0.837 0.859 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
20. ZK858.1 gld-4 14162 7.333 0.907 0.897 0.966 0.897 0.966 0.945 0.875 0.880 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
21. F25G6.9 F25G6.9 3071 7.331 0.933 0.943 0.940 0.943 0.980 0.897 0.772 0.923
22. C34E10.1 gop-3 11393 7.325 0.894 0.951 0.932 0.951 0.972 0.923 0.795 0.907 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
23. Y57A10A.18 pqn-87 31844 7.322 0.895 0.946 0.937 0.946 0.955 0.950 0.832 0.861 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
24. C07A9.3 tlk-1 12572 7.321 0.863 0.934 0.948 0.934 0.949 0.976 0.896 0.821 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
25. F52C12.4 denn-4 4398 7.314 0.870 0.943 0.891 0.943 0.974 0.948 0.833 0.912 DENN domain type RAB GEF [Source:RefSeq peptide;Acc:NP_001294384]
26. F32A5.1 ada-2 8343 7.312 0.881 0.933 0.943 0.933 0.974 0.945 0.820 0.883 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
27. ZC518.3 ccr-4 15531 7.311 0.868 0.929 0.941 0.929 0.960 0.967 0.822 0.895 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
28. D1014.3 snap-1 16776 7.311 0.920 0.939 0.942 0.939 0.963 0.907 0.808 0.893 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
29. K10C3.2 ensa-1 19836 7.311 0.928 0.933 0.940 0.933 0.952 0.938 0.778 0.909 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
30. Y56A3A.1 ntl-3 10450 7.309 0.874 0.953 0.901 0.953 0.980 0.962 0.786 0.900 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
31. F48E8.6 disl-2 8774 7.308 0.880 0.941 0.904 0.941 0.970 0.931 0.828 0.913 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
32. M106.4 gmps-1 12232 7.303 0.910 0.916 0.941 0.916 0.959 0.923 0.852 0.886 Probable GMP synthase [glutamine-hydrolyzing] [Source:UniProtKB/Swiss-Prot;Acc:Q09580]
33. Y57E12AM.1 Y57E12AM.1 10510 7.303 0.918 0.912 0.934 0.912 0.964 0.911 0.839 0.913 Transmembrane protein 258 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q965T1]
34. T01G1.3 sec-31 10504 7.301 0.905 0.942 0.918 0.942 0.969 0.937 0.831 0.857 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
35. C16A3.7 nfx-1 4680 7.3 0.863 0.932 0.933 0.932 0.967 0.939 0.831 0.903 Transcriptional repressor NF-X1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18034]
36. Y32F6A.3 pap-1 11972 7.3 0.881 0.938 0.942 0.938 0.960 0.956 0.850 0.835 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
37. D1007.7 nrd-1 6738 7.299 0.874 0.954 0.963 0.954 0.969 0.929 0.821 0.835 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
38. B0261.2 let-363 8628 7.298 0.911 0.946 0.894 0.946 0.956 0.945 0.867 0.833 Target of rapamycin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Q95]
39. R01H2.6 ubc-18 13394 7.298 0.915 0.938 0.951 0.938 0.962 0.943 0.810 0.841 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
40. Y55D9A.1 efa-6 10012 7.294 0.836 0.944 0.961 0.944 0.972 0.918 0.842 0.877 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
41. Y53C12A.4 mop-25.2 7481 7.292 0.921 0.932 0.925 0.932 0.950 0.946 0.812 0.874 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
42. F37E3.1 ncbp-1 5649 7.291 0.896 0.943 0.932 0.943 0.959 0.908 0.842 0.868 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
43. C32E8.11 ubr-1 10338 7.288 0.884 0.916 0.935 0.916 0.980 0.937 0.867 0.853 E3 ubiquitin-protein ligase ubr-1 [Source:UniProtKB/Swiss-Prot;Acc:P91133]
44. F26E4.1 sur-6 16191 7.286 0.890 0.943 0.911 0.943 0.969 0.942 0.802 0.886 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
45. Y54E10A.9 vbh-1 28746 7.285 0.896 0.928 0.918 0.928 0.971 0.942 0.833 0.869 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
46. C46C2.1 wnk-1 15184 7.285 0.874 0.936 0.942 0.936 0.958 0.915 0.879 0.845 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
47. Y73B6BL.6 sqd-1 41708 7.284 0.920 0.945 0.905 0.945 0.963 0.904 0.824 0.878 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
48. F36F2.3 rbpl-1 15376 7.284 0.820 0.946 0.945 0.946 0.968 0.925 0.830 0.904 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
49. F46B6.3 smg-4 4959 7.283 0.913 0.966 0.927 0.966 0.961 0.862 0.791 0.897 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
50. T06D8.6 cchl-1 26292 7.283 0.937 0.945 0.946 0.945 0.978 0.912 0.799 0.821 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
51. T09B4.10 chn-1 5327 7.282 0.916 0.955 0.929 0.955 0.914 0.890 0.810 0.913 C-term of Hsp70-iNteracting protein (CHIP family) [Source:RefSeq peptide;Acc:NP_491781]
52. DY3.2 lmn-1 22449 7.282 0.937 0.951 0.934 0.951 0.944 0.960 0.790 0.815 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
53. Y116A8C.35 uaf-2 13808 7.282 0.907 0.954 0.946 0.954 0.963 0.920 0.811 0.827 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
54. Y48G8AL.6 smg-2 12561 7.282 0.882 0.946 0.938 0.946 0.985 0.942 0.800 0.843 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
55. ZK287.5 rbx-1 13546 7.281 0.922 0.937 0.946 0.937 0.951 0.930 0.814 0.844 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
56. T13F2.3 pis-1 4560 7.281 0.897 0.953 0.959 0.953 0.952 0.917 0.828 0.822 PIS (Pax-2, IA-1/6, Smad-2 interacting protein) homolog [Source:RefSeq peptide;Acc:NP_501749]
57. F46F3.4 ape-1 8747 7.28 0.863 0.923 0.900 0.923 0.957 0.942 0.883 0.889 Apoptotic enhancer 1 protein [Source:UniProtKB/Swiss-Prot;Acc:Q9XVN3]
58. F39B2.11 mtx-1 8526 7.279 0.911 0.952 0.934 0.952 0.970 0.927 0.762 0.871 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
59. ZK20.3 rad-23 35070 7.279 0.933 0.919 0.951 0.919 0.955 0.946 0.797 0.859
60. Y56A3A.20 ccf-1 18463 7.278 0.896 0.942 0.916 0.942 0.968 0.918 0.786 0.910 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
61. Y17G7B.17 Y17G7B.17 11197 7.278 0.876 0.911 0.936 0.911 0.950 0.973 0.847 0.874
62. C36B1.8 gls-1 8617 7.277 0.874 0.943 0.923 0.943 0.957 0.921 0.830 0.886 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
63. C07G1.4 wsp-1 11226 7.277 0.896 0.943 0.944 0.943 0.961 0.933 0.805 0.852 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
64. T12D8.6 mlc-5 19567 7.276 0.921 0.933 0.952 0.933 0.951 0.911 0.783 0.892 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
65. Y54E10A.3 txl-1 5426 7.276 0.900 0.947 0.935 0.947 0.970 0.922 0.834 0.821 ThioredoXin-Like [Source:RefSeq peptide;Acc:NP_491127]
66. C50C3.6 prp-8 19582 7.273 0.907 0.920 0.925 0.920 0.967 0.926 0.824 0.884 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
67. Y106G6E.6 csnk-1 11517 7.272 0.893 0.937 0.904 0.937 0.939 0.951 0.854 0.857 Casein kinase I gamma [Source:UniProtKB/Swiss-Prot;Acc:Q8WQ99]
68. C26C6.1 pbrm-1 4601 7.27 0.863 0.919 0.939 0.919 0.968 0.929 0.850 0.883 PolyBRoMo domain containing [Source:RefSeq peptide;Acc:NP_001021008]
69. T05B11.3 clic-1 19766 7.269 0.878 0.928 0.940 0.928 0.957 0.899 0.872 0.867 Clathrin LIght Chain [Source:RefSeq peptide;Acc:NP_504999]
70. T12E12.4 drp-1 7694 7.269 0.923 0.944 0.962 0.944 0.956 0.937 0.733 0.870 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
71. F58G11.1 letm-1 13414 7.268 0.900 0.924 0.909 0.924 0.955 0.944 0.833 0.879 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
72. B0286.4 ntl-2 14207 7.268 0.887 0.926 0.967 0.926 0.942 0.942 0.851 0.827 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_494772]
73. F26E4.11 hrdl-1 14721 7.267 0.848 0.936 0.941 0.936 0.954 0.921 0.818 0.913 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
74. F49E8.3 pam-1 25149 7.267 0.916 0.918 0.961 0.918 0.955 0.942 0.834 0.823
75. ZC262.3 iglr-2 6268 7.265 0.900 0.933 0.915 0.933 0.956 0.953 0.834 0.841 Immunoglobulin domain and leucine-rich repeat-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34595]
76. Y65B4BR.4 wwp-1 23206 7.265 0.918 0.957 0.957 0.957 0.955 0.913 0.766 0.842 WW domain Protein (E3 ubiquitin ligase) [Source:RefSeq peptide;Acc:NP_001293271]
77. T17E9.1 kin-18 8172 7.264 0.885 0.955 0.955 0.955 0.956 0.907 0.838 0.813 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
78. F08F8.10 F08F8.10 2087 7.263 0.915 0.934 0.887 0.934 0.978 0.936 0.822 0.857
79. B0334.5 B0334.5 4713 7.26 0.885 0.957 0.947 0.957 0.969 0.931 0.781 0.833
80. C28H8.9 dpff-1 8684 7.26 0.923 0.949 0.922 0.949 0.969 0.918 0.787 0.843 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
81. Y61A9LA.8 sut-2 11388 7.259 0.889 0.935 0.945 0.935 0.969 0.920 0.806 0.860 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
82. F54C8.5 rheb-1 6358 7.258 0.875 0.949 0.967 0.949 0.920 0.873 0.797 0.928 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
83. T20H4.4 adr-2 5495 7.257 0.902 0.946 0.962 0.946 0.966 0.919 0.823 0.793 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
84. R01B10.5 jamp-1 10072 7.256 0.913 0.943 0.959 0.943 0.944 0.892 0.824 0.838 JAMP (JNK1-Associated Membrane Protein) homolog [Source:RefSeq peptide;Acc:NP_504568]
85. T21B10.4 T21B10.4 11648 7.256 0.934 0.911 0.963 0.911 0.919 0.903 0.822 0.893
86. F08F8.3 kap-1 31437 7.256 0.925 0.940 0.942 0.940 0.953 0.896 0.750 0.910 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
87. R07G3.5 pgam-5 11646 7.255 0.915 0.940 0.952 0.940 0.944 0.910 0.798 0.856 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
88. C25H3.6 mdt-26 9423 7.255 0.879 0.940 0.933 0.940 0.963 0.932 0.812 0.856 MeDiaTor [Source:RefSeq peptide;Acc:NP_495108]
89. Y119C1B.8 bet-1 5991 7.254 0.837 0.940 0.937 0.940 0.947 0.955 0.808 0.890 Bromodomain-containing protein bet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y80]
90. C47B2.4 pbs-2 19805 7.253 0.925 0.939 0.931 0.939 0.968 0.912 0.803 0.836 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
91. K05C4.1 pbs-5 17648 7.253 0.946 0.954 0.940 0.954 0.964 0.925 0.761 0.809 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
92. F16D3.2 rsd-6 8211 7.251 0.871 0.919 0.960 0.919 0.971 0.931 0.848 0.832
93. C18D11.4 rsp-8 18308 7.251 0.893 0.916 0.914 0.916 0.969 0.930 0.814 0.899 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
94. ZC404.9 gck-2 8382 7.25 0.866 0.951 0.952 0.951 0.983 0.918 0.846 0.783 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
95. M01E5.5 top-1 25458 7.249 0.843 0.939 0.936 0.939 0.980 0.941 0.855 0.816 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
96. F23F1.8 rpt-4 14303 7.247 0.944 0.954 0.937 0.954 0.931 0.916 0.807 0.804 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
97. F01G4.3 skih-2 3353 7.246 0.873 0.957 0.943 0.957 0.939 0.925 0.804 0.848 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
98. ZC518.2 sec-24.2 13037 7.245 0.902 0.952 0.894 0.952 0.952 0.935 0.801 0.857 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502354]
99. F10G8.3 rae-1 7542 7.245 0.917 0.946 0.933 0.946 0.953 0.871 0.860 0.819 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
100. C36B1.4 pas-4 13140 7.245 0.909 0.943 0.905 0.943 0.971 0.927 0.826 0.821 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]

There are 878 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA