C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T13F2.3

Gene ID Gene Name Reads Transcripts Annotation
T13F2.3 pis-1 4560 T13F2.3a, T13F2.3b PIS (Pax-2, IA-1/6, Smad-2 interacting protein) homolog [Source:RefSeq peptide;Acc:NP_501749]

Genes with expression patterns similar to T13F2.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T13F2.3 pis-1 4560 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PIS (Pax-2, IA-1/6, Smad-2 interacting protein) homolog [Source:RefSeq peptide;Acc:NP_501749]
2. ZK686.4 snu-23 9040 7.599 0.963 0.957 0.969 0.957 0.957 0.953 0.934 0.909 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
3. T26A5.5 jhdm-1 12698 7.592 0.931 0.964 0.968 0.964 0.953 0.957 0.946 0.909 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
4. T12E12.4 drp-1 7694 7.59 0.963 0.964 0.980 0.964 0.967 0.961 0.920 0.871 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
5. Y38A8.3 ulp-2 7403 7.583 0.965 0.975 0.978 0.975 0.967 0.928 0.950 0.845 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
6. T10F2.4 prp-19 11298 7.581 0.944 0.960 0.967 0.960 0.965 0.952 0.932 0.901 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
7. F56D2.6 ddx-15 12282 7.58 0.927 0.979 0.971 0.979 0.949 0.936 0.937 0.902 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
8. C25D7.8 otub-1 7941 7.576 0.949 0.951 0.966 0.951 0.938 0.959 0.955 0.907 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
9. F36D4.3 hum-2 16493 7.572 0.970 0.952 0.963 0.952 0.958 0.952 0.939 0.886 Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
10. ZC395.8 ztf-8 5521 7.57 0.921 0.944 0.984 0.944 0.963 0.962 0.933 0.919 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
11. C36B1.8 gls-1 8617 7.57 0.956 0.959 0.968 0.959 0.956 0.959 0.922 0.891 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
12. F26F4.10 rars-1 9971 7.568 0.939 0.945 0.968 0.945 0.962 0.975 0.900 0.934 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
13. F18E2.3 scc-3 13464 7.567 0.962 0.977 0.978 0.977 0.937 0.967 0.900 0.869 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
14. C43H8.2 mafr-1 5790 7.567 0.926 0.966 0.965 0.966 0.962 0.943 0.910 0.929 Repressor of RNA polymerase III transcription MAF1 [Source:RefSeq peptide;Acc:NP_492777]
15. F32A5.1 ada-2 8343 7.565 0.936 0.961 0.974 0.961 0.955 0.962 0.923 0.893 ADA (histone acetyltransferase complex) subunit [Source:RefSeq peptide;Acc:NP_001022133]
16. K08E3.8 mdt-29 4678 7.565 0.957 0.974 0.959 0.974 0.940 0.964 0.913 0.884 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
17. K02F2.1 dpf-3 11465 7.56 0.953 0.967 0.972 0.967 0.959 0.955 0.866 0.921 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
18. B0035.3 B0035.3 4118 7.558 0.965 0.951 0.984 0.951 0.950 0.950 0.933 0.874
19. C33H5.17 zgpa-1 7873 7.556 0.953 0.960 0.976 0.960 0.957 0.953 0.873 0.924 Zinc finger G-PAtch domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_501296]
20. F26E4.1 sur-6 16191 7.556 0.964 0.967 0.952 0.967 0.929 0.968 0.889 0.920 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
21. T05F1.6 hsr-9 13312 7.556 0.970 0.962 0.972 0.962 0.946 0.947 0.922 0.875
22. F46B6.3 smg-4 4959 7.554 0.942 0.971 0.957 0.971 0.967 0.933 0.933 0.880 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
23. Y47G6A.20 rnp-6 5542 7.551 0.943 0.978 0.967 0.978 0.959 0.959 0.855 0.912 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
24. ZK742.1 xpo-1 20741 7.55 0.959 0.962 0.981 0.962 0.944 0.911 0.905 0.926 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
25. T10C6.4 srx-44 8454 7.548 0.960 0.947 0.983 0.947 0.946 0.959 0.936 0.870 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
26. C52E4.6 cyl-1 6405 7.548 0.944 0.972 0.966 0.972 0.960 0.955 0.925 0.854 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
27. K11D12.2 pqn-51 15951 7.547 0.952 0.973 0.968 0.973 0.961 0.965 0.908 0.847 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
28. F52C9.8 pqe-1 7546 7.545 0.956 0.958 0.971 0.958 0.958 0.946 0.935 0.863 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
29. W02F12.6 sna-1 7338 7.545 0.966 0.950 0.968 0.950 0.951 0.967 0.911 0.882 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
30. F37E3.1 ncbp-1 5649 7.544 0.961 0.951 0.972 0.951 0.972 0.953 0.922 0.862 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
31. E01A2.4 let-504 9788 7.544 0.941 0.962 0.968 0.962 0.962 0.967 0.935 0.847
32. C10C5.6 daf-15 8724 7.543 0.945 0.941 0.969 0.941 0.942 0.957 0.953 0.895 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
33. F25B3.1 ehbp-1 6409 7.541 0.928 0.967 0.976 0.967 0.942 0.954 0.917 0.890 EH (Eps-15-homology) domain Binding Protein family [Source:RefSeq peptide;Acc:NP_505468]
34. C02B10.5 C02B10.5 9171 7.537 0.956 0.965 0.975 0.965 0.948 0.954 0.918 0.856
35. C37A2.2 pqn-20 10913 7.536 0.961 0.952 0.963 0.952 0.935 0.946 0.914 0.913 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
36. F28C6.6 suf-1 3642 7.533 0.931 0.967 0.932 0.967 0.949 0.956 0.937 0.894 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
37. C08B11.3 swsn-7 11608 7.532 0.964 0.950 0.967 0.950 0.950 0.933 0.903 0.915 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
38. T04A8.14 emb-5 11746 7.531 0.965 0.959 0.976 0.959 0.946 0.967 0.935 0.824 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
39. Y34D9A.1 mrpl-38 5291 7.53 0.919 0.969 0.961 0.969 0.952 0.956 0.933 0.871 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
40. Y57A10A.18 pqn-87 31844 7.529 0.951 0.972 0.972 0.972 0.944 0.936 0.880 0.902 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
41. Y54E5A.4 npp-4 6288 7.528 0.946 0.965 0.969 0.965 0.948 0.951 0.909 0.875 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
42. Y54E2A.3 tac-1 6308 7.528 0.965 0.948 0.963 0.948 0.967 0.963 0.897 0.877 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
43. T21B10.4 T21B10.4 11648 7.528 0.974 0.932 0.987 0.932 0.955 0.948 0.925 0.875
44. Y61A9LA.8 sut-2 11388 7.527 0.942 0.947 0.961 0.947 0.968 0.971 0.922 0.869 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
45. Y46G5A.4 snrp-200 13827 7.527 0.922 0.969 0.975 0.969 0.953 0.949 0.926 0.864 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
46. Y55D9A.1 efa-6 10012 7.524 0.944 0.970 0.981 0.970 0.934 0.934 0.892 0.899 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
47. F01G4.3 skih-2 3353 7.524 0.933 0.973 0.981 0.973 0.942 0.953 0.925 0.844 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
48. H38K22.1 evl-14 3704 7.523 0.921 0.955 0.944 0.955 0.974 0.958 0.927 0.889
49. F32H2.4 thoc-3 3861 7.523 0.950 0.961 0.972 0.961 0.965 0.939 0.922 0.853 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
50. Y37A1B.1 lst-3 10739 7.523 0.898 0.964 0.958 0.964 0.978 0.943 0.912 0.906 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
51. K01C8.10 cct-4 15077 7.522 0.949 0.962 0.943 0.962 0.973 0.950 0.889 0.894 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
52. F08F8.3 kap-1 31437 7.521 0.945 0.967 0.965 0.967 0.940 0.917 0.895 0.925 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
53. F42A6.7 hrp-1 28201 7.521 0.947 0.946 0.961 0.946 0.961 0.968 0.917 0.875 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
54. C28H8.9 dpff-1 8684 7.52 0.946 0.957 0.954 0.957 0.972 0.976 0.909 0.849 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
55. T12D8.3 acbp-5 6816 7.519 0.961 0.965 0.966 0.965 0.951 0.949 0.888 0.874 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
56. F52C9.7 mog-3 9880 7.519 0.957 0.945 0.966 0.945 0.935 0.945 0.930 0.896 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
57. H19N07.1 erfa-3 19869 7.515 0.900 0.966 0.965 0.966 0.956 0.962 0.906 0.894 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
58. D2089.1 rsp-7 11057 7.513 0.955 0.974 0.985 0.974 0.935 0.968 0.899 0.823 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
59. F56A8.6 cpf-2 2730 7.512 0.939 0.951 0.972 0.951 0.951 0.957 0.908 0.883 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
60. EEED8.16 brap-2 3123 7.512 0.925 0.948 0.942 0.948 0.936 0.968 0.910 0.935 BRCA1-associated protein homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q95QN6]
61. C27B7.1 spr-2 14958 7.512 0.958 0.960 0.983 0.960 0.950 0.917 0.938 0.846 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
62. ZK858.1 gld-4 14162 7.512 0.972 0.920 0.975 0.920 0.949 0.966 0.917 0.893 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
63. T23H2.1 npp-12 12425 7.511 0.955 0.962 0.975 0.962 0.950 0.924 0.924 0.859 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
64. C50C3.6 prp-8 19582 7.511 0.929 0.953 0.965 0.953 0.955 0.960 0.899 0.897 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
65. F28B3.7 him-1 18274 7.511 0.966 0.971 0.983 0.971 0.951 0.975 0.921 0.773 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
66. F36F2.3 rbpl-1 15376 7.511 0.885 0.965 0.949 0.965 0.969 0.954 0.898 0.926 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
67. F26H11.2 nurf-1 13015 7.509 0.976 0.967 0.970 0.967 0.956 0.920 0.925 0.828 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
68. C18A3.5 tiar-1 25400 7.509 0.953 0.960 0.980 0.960 0.921 0.915 0.935 0.885 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
69. ZK328.2 eftu-2 7040 7.509 0.931 0.959 0.966 0.959 0.916 0.949 0.947 0.882 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
70. C46C2.1 wnk-1 15184 7.508 0.957 0.962 0.977 0.962 0.937 0.928 0.890 0.895 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
71. T19B4.2 npp-7 13073 7.506 0.946 0.959 0.960 0.959 0.969 0.938 0.868 0.907 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
72. T05H10.2 apn-1 5628 7.506 0.947 0.970 0.974 0.970 0.928 0.945 0.928 0.844 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
73. C43E11.3 met-1 7581 7.506 0.926 0.947 0.954 0.947 0.963 0.958 0.911 0.900 Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_491340]
74. Y102A5A.1 cand-1 11808 7.506 0.911 0.953 0.965 0.953 0.969 0.958 0.926 0.871 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
75. C55A6.2 ttll-5 5158 7.506 0.935 0.983 0.967 0.983 0.929 0.890 0.869 0.950 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
76. C39E9.14 dli-1 5650 7.505 0.960 0.960 0.964 0.960 0.972 0.945 0.845 0.899 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
77. F45H11.3 hpo-35 8299 7.505 0.925 0.966 0.949 0.966 0.976 0.964 0.900 0.859
78. R144.4 wip-1 14168 7.503 0.941 0.949 0.977 0.949 0.933 0.945 0.928 0.881 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
79. F41E6.4 smk-1 22394 7.503 0.944 0.969 0.982 0.969 0.933 0.962 0.870 0.874 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
80. K03H1.2 mog-1 4057 7.502 0.918 0.955 0.968 0.955 0.953 0.977 0.915 0.861 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 [Source:UniProtKB/Swiss-Prot;Acc:P34498]
81. F10E9.8 sas-4 3703 7.501 0.972 0.966 0.974 0.966 0.961 0.935 0.889 0.838 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
82. ZK177.8 ZK177.8 3403 7.501 0.966 0.935 0.985 0.935 0.967 0.959 0.878 0.876
83. K10C3.2 ensa-1 19836 7.501 0.950 0.959 0.973 0.959 0.935 0.932 0.901 0.892 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
84. F36A2.1 cids-2 4551 7.501 0.950 0.963 0.966 0.963 0.967 0.939 0.906 0.847 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
85. F39B2.11 mtx-1 8526 7.5 0.953 0.950 0.972 0.950 0.923 0.950 0.884 0.918 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
86. M106.1 mix-1 7950 7.5 0.929 0.966 0.972 0.966 0.949 0.954 0.891 0.873 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
87. R12C12.2 ran-5 14517 7.5 0.956 0.960 0.984 0.960 0.924 0.926 0.918 0.872 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
88. Y105E8A.17 ekl-4 4732 7.5 0.933 0.965 0.968 0.965 0.959 0.958 0.931 0.821
89. F45F2.11 F45F2.11 6741 7.5 0.936 0.914 0.978 0.914 0.962 0.933 0.951 0.912
90. C34E10.5 prmt-5 12277 7.5 0.927 0.955 0.970 0.955 0.952 0.964 0.925 0.852 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
91. F59G1.3 vps-35 9577 7.499 0.955 0.970 0.985 0.970 0.962 0.928 0.874 0.855 Vacuolar protein sorting-associated protein 35 [Source:RefSeq peptide;Acc:NP_495180]
92. Y110A7A.8 prp-31 4436 7.498 0.962 0.960 0.964 0.960 0.943 0.963 0.873 0.873 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
93. T04A8.10 sel-13 3109 7.498 0.933 0.935 0.975 0.935 0.955 0.966 0.920 0.879 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
94. Y48G8AL.6 smg-2 12561 7.498 0.936 0.969 0.951 0.969 0.969 0.972 0.861 0.871 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
95. Y73F8A.34 tag-349 7966 7.497 0.959 0.947 0.980 0.947 0.958 0.960 0.930 0.816
96. T17E9.1 kin-18 8172 7.495 0.968 0.949 0.977 0.949 0.956 0.951 0.926 0.819 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
97. T18H9.6 mdt-27 5418 7.495 0.903 0.959 0.975 0.959 0.919 0.952 0.911 0.917 MeDiaTor [Source:RefSeq peptide;Acc:NP_505386]
98. F10G8.3 rae-1 7542 7.494 0.935 0.972 0.969 0.972 0.960 0.973 0.904 0.809 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
99. Y113G7B.23 swsn-1 13766 7.494 0.952 0.962 0.957 0.962 0.932 0.954 0.889 0.886 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
100. Y56A3A.20 ccf-1 18463 7.494 0.939 0.962 0.973 0.962 0.971 0.942 0.866 0.879 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]

There are 2651 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA