C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y54E10A.3

Gene ID Gene Name Reads Transcripts Annotation
Y54E10A.3 txl-1 5426 Y54E10A.3 ThioredoXin-Like [Source:RefSeq peptide;Acc:NP_491127]

Genes with expression patterns similar to Y54E10A.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y54E10A.3 txl-1 5426 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ThioredoXin-Like [Source:RefSeq peptide;Acc:NP_491127]
2. D1054.2 pas-2 11518 7.728 0.964 0.977 0.938 0.977 0.983 0.982 0.970 0.937 Proteasome subunit alpha type-2 [Source:UniProtKB/Swiss-Prot;Acc:Q27488]
3. F58G11.2 rde-12 6935 7.706 0.923 0.981 0.980 0.981 0.977 0.968 0.932 0.964 DEAD-box ATP-dependent RNA helicase rde-12 [Source:UniProtKB/Swiss-Prot;Acc:P90897]
4. F39H11.5 pbs-7 13631 7.696 0.947 0.979 0.973 0.979 0.975 0.972 0.944 0.927 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
5. Y38A8.2 pbs-3 18117 7.693 0.954 0.972 0.976 0.972 0.982 0.955 0.945 0.937 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
6. K08D12.1 pbs-1 21677 7.693 0.959 0.976 0.976 0.976 0.966 0.960 0.953 0.927 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
7. ZC518.2 sec-24.2 13037 7.689 0.951 0.976 0.950 0.976 0.976 0.985 0.913 0.962 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502354]
8. T20F5.2 pbs-4 8985 7.689 0.949 0.964 0.978 0.964 0.975 0.981 0.958 0.920 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
9. Y62E10A.10 emc-3 8138 7.686 0.948 0.978 0.954 0.978 0.969 0.975 0.946 0.938 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_502575]
10. C02F5.9 pbs-6 20120 7.68 0.953 0.980 0.967 0.980 0.954 0.983 0.943 0.920 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
11. C30C11.2 rpn-3 14437 7.674 0.958 0.983 0.977 0.983 0.961 0.978 0.921 0.913 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
12. C13B4.2 usp-14 9000 7.672 0.932 0.984 0.967 0.984 0.970 0.980 0.902 0.953 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
13. ZK20.3 rad-23 35070 7.67 0.963 0.983 0.968 0.983 0.967 0.964 0.914 0.928
14. T06D8.8 rpn-9 11282 7.669 0.941 0.976 0.979 0.976 0.977 0.980 0.922 0.918 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_496405]
15. C36B1.4 pas-4 13140 7.664 0.958 0.977 0.962 0.977 0.980 0.976 0.958 0.876 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
16. T21E12.4 dhc-1 20370 7.661 0.943 0.973 0.974 0.973 0.972 0.982 0.897 0.947 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
17. Y94H6A.9 ubxn-2 7082 7.658 0.916 0.982 0.953 0.982 0.974 0.964 0.942 0.945 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001023590]
18. T12D8.6 mlc-5 19567 7.656 0.942 0.990 0.966 0.990 0.950 0.942 0.942 0.934 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
19. F23F1.8 rpt-4 14303 7.654 0.960 0.979 0.966 0.979 0.949 0.983 0.936 0.902 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
20. Y92C3B.2 uaf-1 14981 7.653 0.947 0.984 0.954 0.984 0.977 0.983 0.900 0.924 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
21. Y110A7A.14 pas-3 6831 7.649 0.956 0.977 0.951 0.977 0.965 0.979 0.934 0.910 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
22. ZK287.5 rbx-1 13546 7.649 0.943 0.969 0.959 0.969 0.962 0.980 0.949 0.918 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
23. F38H4.9 let-92 25368 7.648 0.974 0.982 0.951 0.982 0.953 0.929 0.939 0.938 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
24. B0361.8 algn-11 2891 7.648 0.946 0.972 0.938 0.972 0.982 0.965 0.951 0.922 Uncharacterized glycosyltransferase B0361.8 [Source:UniProtKB/Swiss-Prot;Acc:P53993]
25. F10G7.8 rpn-5 16014 7.647 0.951 0.984 0.965 0.984 0.960 0.962 0.926 0.915 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
26. F09G2.8 F09G2.8 2899 7.647 0.955 0.961 0.975 0.961 0.953 0.948 0.940 0.954 Probable phospholipase D F09G2.8 [Source:UniProtKB/Swiss-Prot;Acc:O17405]
27. R01H2.6 ubc-18 13394 7.646 0.967 0.970 0.950 0.970 0.965 0.967 0.940 0.917 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
28. T27A3.2 usp-5 11388 7.64 0.950 0.982 0.963 0.982 0.949 0.978 0.912 0.924 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
29. F39B2.10 dnj-12 35162 7.64 0.963 0.968 0.952 0.968 0.975 0.943 0.941 0.930 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
30. W02B12.2 rsp-2 14764 7.639 0.928 0.982 0.960 0.982 0.978 0.976 0.913 0.920 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
31. F58G11.1 letm-1 13414 7.638 0.940 0.968 0.965 0.968 0.963 0.978 0.928 0.928 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
32. C47B2.4 pbs-2 19805 7.638 0.972 0.965 0.963 0.965 0.967 0.941 0.924 0.941 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
33. K07C5.8 cash-1 10523 7.634 0.948 0.982 0.956 0.982 0.966 0.941 0.963 0.896 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
34. C17H12.1 dyci-1 9858 7.631 0.945 0.984 0.970 0.984 0.955 0.979 0.943 0.871 DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
35. F44B9.8 F44B9.8 1978 7.629 0.927 0.966 0.979 0.966 0.960 0.965 0.912 0.954 Probable replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P34429]
36. F41E6.4 smk-1 22394 7.626 0.918 0.981 0.963 0.981 0.973 0.961 0.947 0.902 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
37. F49E8.3 pam-1 25149 7.624 0.950 0.944 0.979 0.944 0.979 0.991 0.929 0.908
38. Y77E11A.13 npp-20 5777 7.624 0.957 0.963 0.978 0.963 0.968 0.965 0.891 0.939 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
39. C43G2.1 paqr-1 17585 7.623 0.952 0.986 0.966 0.986 0.942 0.968 0.892 0.931 Progestin and adipoQ receptor-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94177]
40. T01G9.6 kin-10 27360 7.623 0.952 0.941 0.917 0.941 0.979 0.972 0.954 0.967 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
41. F11A10.4 mon-2 6726 7.617 0.930 0.962 0.970 0.962 0.954 0.970 0.932 0.937 Monensin-resistant homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19338]
42. CD4.6 pas-6 18332 7.615 0.949 0.975 0.948 0.975 0.948 0.967 0.953 0.900 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
43. Y71F9AM.4 cogc-3 2678 7.615 0.922 0.973 0.934 0.973 0.967 0.986 0.930 0.930 Conserved Oligomeric Golgi (COG) Component [Source:RefSeq peptide;Acc:NP_001021806]
44. H19N07.2 math-33 10570 7.615 0.955 0.968 0.971 0.968 0.970 0.967 0.915 0.901 Ubiquitin carboxyl-terminal hydrolase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q7JKC3]
45. F32D1.9 fipp-1 10239 7.614 0.947 0.974 0.978 0.974 0.951 0.962 0.939 0.889 Factor Interacting with Poly(A) Polymerase [Source:RefSeq peptide;Acc:NP_504203]
46. Y17G7B.17 Y17G7B.17 11197 7.614 0.916 0.968 0.957 0.968 0.973 0.957 0.932 0.943
47. T20G5.1 chc-1 32620 7.612 0.948 0.978 0.966 0.978 0.954 0.961 0.862 0.965 Probable clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P34574]
48. Y65B4BR.4 wwp-1 23206 7.611 0.950 0.974 0.967 0.974 0.959 0.969 0.895 0.923 WW domain Protein (E3 ubiquitin ligase) [Source:RefSeq peptide;Acc:NP_001293271]
49. F55B12.3 sel-10 10304 7.61 0.959 0.981 0.950 0.981 0.948 0.968 0.906 0.917 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
50. K05C4.1 pbs-5 17648 7.609 0.953 0.971 0.963 0.971 0.960 0.959 0.888 0.944 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
51. R02D3.2 cogc-8 2455 7.606 0.903 0.975 0.927 0.975 0.975 0.988 0.937 0.926 Conserved oligomeric Golgi complex subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:O44502]
52. T24B8.2 T24B8.2 2167 7.606 0.957 0.946 0.932 0.946 0.983 0.988 0.932 0.922
53. T06D8.6 cchl-1 26292 7.601 0.957 0.972 0.959 0.972 0.981 0.944 0.909 0.907 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
54. H06H21.6 ubxn-6 9202 7.6 0.936 0.981 0.949 0.981 0.962 0.973 0.906 0.912 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
55. T12E12.4 drp-1 7694 7.599 0.944 0.979 0.966 0.979 0.946 0.952 0.907 0.926 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
56. F59B2.7 rab-6.1 10749 7.598 0.978 0.952 0.964 0.952 0.982 0.926 0.909 0.935 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
57. W03F9.5 ttb-1 8682 7.598 0.951 0.965 0.977 0.965 0.979 0.971 0.944 0.846 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
58. F16D3.2 rsd-6 8211 7.597 0.886 0.983 0.970 0.983 0.975 0.963 0.932 0.905
59. Y40B10A.1 lbp-9 30119 7.597 0.974 0.958 0.961 0.958 0.948 0.969 0.922 0.907 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
60. K10B2.1 lin-23 15896 7.594 0.908 0.979 0.963 0.979 0.948 0.974 0.930 0.913 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
61. C47G2.5 saps-1 7555 7.594 0.886 0.984 0.961 0.984 0.974 0.959 0.912 0.934 SAPS (phosphatase associated) domain protein [Source:RefSeq peptide;Acc:NP_496414]
62. C06A1.1 cdc-48.1 52743 7.591 0.947 0.988 0.968 0.988 0.922 0.975 0.878 0.925 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
63. F29G9.5 rpt-2 18618 7.59 0.970 0.982 0.964 0.982 0.920 0.970 0.884 0.918 Probable 26S protease regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368]
64. Y48G8AL.1 herc-1 3873 7.59 0.922 0.974 0.931 0.974 0.965 0.934 0.955 0.935 HECT and RCC domain E3 ubiquitin ligase [Source:RefSeq peptide;Acc:NP_001293432]
65. F48E8.6 disl-2 8774 7.588 0.947 0.965 0.961 0.965 0.952 0.965 0.918 0.915 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
66. T26A5.6 T26A5.6 9194 7.587 0.944 0.989 0.968 0.989 0.961 0.958 0.906 0.872
67. C36B1.8 gls-1 8617 7.585 0.941 0.982 0.976 0.982 0.952 0.917 0.917 0.918 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
68. C10C6.6 catp-8 8079 7.583 0.855 0.964 0.958 0.964 0.977 0.990 0.929 0.946 Probable manganese-transporting ATPase C10C6.6 [Source:UniProtKB/Swiss-Prot;Acc:P90747]
69. Y55D9A.1 efa-6 10012 7.583 0.875 0.977 0.971 0.977 0.979 0.975 0.926 0.903 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
70. F12F6.6 sec-24.1 10754 7.583 0.934 0.963 0.947 0.963 0.976 0.969 0.880 0.951 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502178]
71. F32B6.8 tbc-3 9252 7.583 0.935 0.971 0.961 0.971 0.959 0.976 0.896 0.914 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
72. C05C10.6 ufd-3 6304 7.581 0.873 0.986 0.959 0.986 0.953 0.980 0.908 0.936 Ubiquitin Fusion Degradation (yeast UFD homolog) [Source:RefSeq peptide;Acc:NP_496146]
73. H06H21.3 eif-1.A 40990 7.58 0.950 0.948 0.919 0.948 0.976 0.954 0.957 0.928 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
74. C17E4.5 pabp-2 12843 7.58 0.923 0.972 0.966 0.972 0.973 0.969 0.907 0.898 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
75. D1014.3 snap-1 16776 7.58 0.928 0.978 0.978 0.978 0.971 0.939 0.925 0.883 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
76. D1022.7 aka-1 10681 7.579 0.911 0.965 0.966 0.965 0.972 0.955 0.902 0.943 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
77. C50C3.8 bath-42 18053 7.579 0.953 0.985 0.964 0.985 0.956 0.976 0.906 0.854 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
78. F49C12.8 rpn-7 15688 7.576 0.971 0.982 0.968 0.982 0.923 0.947 0.866 0.937 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
79. DY3.2 lmn-1 22449 7.575 0.957 0.982 0.964 0.982 0.958 0.949 0.904 0.879 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
80. F56H1.4 rpt-5 16849 7.575 0.939 0.991 0.969 0.991 0.939 0.963 0.909 0.874 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_491672]
81. F08F8.8 gos-28 5185 7.574 0.941 0.969 0.946 0.969 0.935 0.974 0.931 0.909 Golgi SNAP receptor complex member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZW1]
82. F15B9.4 inft-2 5927 7.572 0.924 0.979 0.960 0.979 0.959 0.957 0.898 0.916 INverted Formin/formin Three-related [Source:RefSeq peptide;Acc:NP_506253]
83. Y32F6A.3 pap-1 11972 7.572 0.913 0.972 0.981 0.972 0.962 0.966 0.914 0.892 Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
84. F41E6.9 vps-60 4469 7.571 0.953 0.978 0.962 0.978 0.955 0.921 0.946 0.878 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]
85. Y71H2B.10 apb-1 10457 7.57 0.930 0.985 0.956 0.985 0.964 0.973 0.869 0.908 AP complex subunit beta [Source:RefSeq peptide;Acc:NP_001022937]
86. B0348.6 ife-3 26859 7.569 0.966 0.978 0.960 0.978 0.966 0.954 0.923 0.844 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
87. ZC404.9 gck-2 8382 7.568 0.901 0.982 0.972 0.982 0.981 0.966 0.883 0.901 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
88. R12E2.3 rpn-8 11194 7.567 0.947 0.988 0.962 0.988 0.936 0.964 0.890 0.892 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
89. F40G9.3 ubc-20 16785 7.566 0.943 0.967 0.948 0.967 0.939 0.955 0.942 0.905 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
90. Y73B6BL.6 sqd-1 41708 7.565 0.972 0.970 0.941 0.970 0.940 0.884 0.932 0.956 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
91. Y53C12A.4 mop-25.2 7481 7.565 0.922 0.988 0.960 0.988 0.974 0.937 0.935 0.861 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
92. T24C4.6 zer-1 16051 7.564 0.883 0.986 0.963 0.986 0.957 0.957 0.915 0.917 Zyg eleven-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q2WF59]
93. K04G2.1 iftb-1 12590 7.562 0.959 0.954 0.918 0.954 0.969 0.938 0.914 0.956 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
94. PAR2.3 aak-1 7150 7.561 0.957 0.980 0.949 0.980 0.958 0.928 0.895 0.914 5'-AMP-activated protein kinase catalytic subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:P45894]
95. Y110A7A.17 mat-1 3797 7.56 0.857 0.980 0.955 0.980 0.968 0.950 0.935 0.935 Metaphase-to-Anaphase Transition defect [Source:RefSeq peptide;Acc:NP_001021714]
96. B0035.14 dnj-1 5412 7.56 0.940 0.949 0.917 0.949 0.980 0.973 0.925 0.927 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001263785]
97. K02F2.1 dpf-3 11465 7.559 0.915 0.972 0.972 0.972 0.979 0.947 0.924 0.878 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
98. Y46G5A.12 vps-2 5685 7.556 0.942 0.950 0.951 0.950 0.963 0.972 0.915 0.913 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_496717]
99. ZK370.5 pdhk-2 9358 7.556 0.947 0.990 0.949 0.990 0.947 0.966 0.814 0.953 Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q02332]
100. B0261.2 let-363 8628 7.554 0.939 0.990 0.937 0.990 0.970 0.957 0.925 0.846 Target of rapamycin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Q95]

There are 2906 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA