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Results for R08D7.3

Gene ID Gene Name Reads Transcripts Annotation
R08D7.3 eif-3.D 6740 R08D7.3 Eukaryotic translation initiation factor 3 subunit D [Source:UniProtKB/Swiss-Prot;Acc:P30642]

Genes with expression patterns similar to R08D7.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R08D7.3 eif-3.D 6740 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Eukaryotic translation initiation factor 3 subunit D [Source:UniProtKB/Swiss-Prot;Acc:P30642]
2. C27D11.1 egl-45 28282 7.802 0.964 0.977 0.978 0.977 0.966 0.994 0.972 0.974 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
3. F31D4.3 fkb-6 21313 7.762 0.969 0.966 0.970 0.966 0.985 0.977 0.952 0.977 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
4. F20D12.1 csr-1 16351 7.74 0.974 0.961 0.976 0.961 0.976 0.985 0.965 0.942 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
5. H06H21.3 eif-1.A 40990 7.732 0.964 0.977 0.976 0.977 0.973 0.967 0.934 0.964 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
6. T01G9.6 kin-10 27360 7.729 0.962 0.976 0.986 0.976 0.973 0.971 0.946 0.939 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
7. Y71H2AM.19 laf-1 9160 7.719 0.944 0.979 0.963 0.979 0.974 0.985 0.953 0.942 Putative DEAD-box RNA helicase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D0PV95]
8. Y54E2A.11 eif-3.B 13795 7.713 0.958 0.967 0.973 0.967 0.975 0.990 0.911 0.972 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
9. T27E9.7 abcf-2 40273 7.707 0.970 0.977 0.979 0.977 0.979 0.948 0.925 0.952 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
10. T24C4.1 ucr-2.3 7057 7.686 0.968 0.966 0.934 0.966 0.984 0.962 0.957 0.949 Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_497284]
11. T23D8.4 eif-3.C 15343 7.683 0.972 0.990 0.972 0.990 0.959 0.926 0.905 0.969 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
12. T10F2.1 gars-1 7204 7.675 0.963 0.978 0.960 0.978 0.967 0.972 0.917 0.940 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
13. Y67D8C.5 eel-1 30623 7.673 0.956 0.979 0.984 0.979 0.961 0.968 0.900 0.946 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
14. F57B9.5 byn-1 58236 7.67 0.970 0.971 0.967 0.971 0.972 0.943 0.912 0.964 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
15. Y65B4BR.5 icd-2 58321 7.666 0.957 0.978 0.975 0.978 0.957 0.919 0.935 0.967 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
16. Y92C3B.2 uaf-1 14981 7.662 0.943 0.939 0.975 0.939 0.966 0.972 0.951 0.977 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
17. Y48G8AL.6 smg-2 12561 7.659 0.981 0.960 0.931 0.960 0.965 0.964 0.933 0.965 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
18. C08C3.4 cyk-7 12075 7.655 0.952 0.951 0.954 0.951 0.979 0.961 0.946 0.961 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
19. K01C8.10 cct-4 15077 7.653 0.962 0.967 0.969 0.967 0.957 0.958 0.942 0.931 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
20. C32E8.11 ubr-1 10338 7.652 0.935 0.969 0.945 0.969 0.965 0.986 0.917 0.966 E3 ubiquitin-protein ligase ubr-1 [Source:UniProtKB/Swiss-Prot;Acc:P91133]
21. K04G2.1 iftb-1 12590 7.65 0.949 0.964 0.976 0.964 0.983 0.965 0.898 0.951 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
22. Y40B10A.1 lbp-9 30119 7.65 0.949 0.955 0.955 0.955 0.944 0.963 0.965 0.964 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
23. Y54E10A.9 vbh-1 28746 7.648 0.967 0.957 0.986 0.957 0.968 0.946 0.928 0.939 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
24. F46A9.4 skr-2 16831 7.647 0.964 0.971 0.952 0.971 0.973 0.932 0.932 0.952 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
25. F39H11.5 pbs-7 13631 7.645 0.940 0.953 0.938 0.953 0.976 0.982 0.933 0.970 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
26. B0432.2 djr-1.1 8628 7.639 0.947 0.957 0.944 0.957 0.973 0.977 0.947 0.937 Glutathione-independent glyoxalase DJR-1.1 [Source:UniProtKB/Swiss-Prot;Acc:P90994]
27. T06D8.6 cchl-1 26292 7.639 0.941 0.930 0.963 0.930 0.980 0.984 0.942 0.969 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
28. C36B1.4 pas-4 13140 7.638 0.936 0.932 0.938 0.932 0.973 0.976 0.972 0.979 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
29. W05B10.1 his-74 21926 7.634 0.943 0.937 0.957 0.937 0.971 0.956 0.977 0.956 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
30. F35G12.2 idhg-1 30065 7.632 0.935 0.970 0.964 0.970 0.971 0.945 0.934 0.943 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
31. C53D5.6 imb-3 28921 7.631 0.954 0.973 0.975 0.973 0.972 0.933 0.904 0.947 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
32. F41E6.4 smk-1 22394 7.63 0.951 0.934 0.929 0.934 0.981 0.980 0.964 0.957 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
33. F39B2.10 dnj-12 35162 7.626 0.951 0.957 0.971 0.957 0.970 0.960 0.942 0.918 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
34. F38A5.13 dnj-11 19678 7.626 0.943 0.963 0.910 0.963 0.979 0.979 0.936 0.953 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
35. T20H4.3 pars-1 8167 7.616 0.972 0.968 0.941 0.968 0.982 0.953 0.886 0.946 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
36. B0205.7 kin-3 29775 7.614 0.956 0.959 0.983 0.959 0.952 0.952 0.921 0.932 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
37. C50C3.6 prp-8 19582 7.613 0.967 0.969 0.958 0.969 0.969 0.934 0.913 0.934 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
38. M117.2 par-5 64868 7.612 0.932 0.964 0.956 0.964 0.951 0.971 0.916 0.958 14-3-3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41932]
39. Y73B6BL.5 seu-1 8719 7.608 0.979 0.970 0.977 0.970 0.917 0.963 0.899 0.933 Suppressor of Ectopic Unc-5 [Source:RefSeq peptide;Acc:NP_001293775]
40. C08B11.7 ubh-4 3186 7.607 0.943 0.943 0.935 0.943 0.962 0.988 0.931 0.962 Probable ubiquitin carboxyl-terminal hydrolase ubh-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09444]
41. T26A5.3 nduf-2.2 3133 7.606 0.927 0.961 0.949 0.961 0.977 0.961 0.944 0.926 NADH Ubiquinone oxidoreductase Fe-S protein [Source:RefSeq peptide;Acc:NP_498423]
42. C02F5.9 pbs-6 20120 7.605 0.933 0.938 0.945 0.938 0.965 0.971 0.966 0.949 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
43. F49E8.3 pam-1 25149 7.603 0.919 0.950 0.933 0.950 0.959 0.988 0.969 0.935
44. F35G12.10 asb-1 9077 7.602 0.959 0.938 0.927 0.938 0.968 0.971 0.953 0.948 ATP Synthase B homolog [Source:RefSeq peptide;Acc:NP_497938]
45. T21E12.4 dhc-1 20370 7.602 0.923 0.950 0.961 0.950 0.978 0.980 0.922 0.938 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
46. H19N07.2 math-33 10570 7.596 0.961 0.951 0.946 0.951 0.954 0.982 0.922 0.929 Ubiquitin carboxyl-terminal hydrolase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q7JKC3]
47. F44A2.1 tag-153 16535 7.593 0.953 0.937 0.941 0.937 0.958 0.967 0.952 0.948
48. K10D2.3 cid-1 7175 7.592 0.932 0.965 0.943 0.965 0.966 0.967 0.898 0.956 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
49. T12D8.2 drr-2 16208 7.592 0.921 0.965 0.981 0.965 0.968 0.928 0.914 0.950 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
50. D2005.5 drh-3 2293 7.591 0.922 0.976 0.932 0.976 0.974 0.958 0.934 0.919 Dicer Related Helicase [Source:RefSeq peptide;Acc:NP_492161]
51. D2089.1 rsp-7 11057 7.589 0.947 0.945 0.944 0.945 0.983 0.956 0.965 0.904 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
52. R107.6 cls-2 10361 7.589 0.965 0.962 0.959 0.962 0.960 0.915 0.913 0.953 CLASP family of microtubule-binding proteins [Source:RefSeq peptide;Acc:NP_001263723]
53. Y116A8C.35 uaf-2 13808 7.589 0.937 0.942 0.955 0.942 0.977 0.944 0.927 0.965 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
54. B0348.6 ife-3 26859 7.586 0.949 0.926 0.941 0.926 0.960 0.970 0.961 0.953 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
55. Y110A7A.14 pas-3 6831 7.586 0.951 0.950 0.895 0.950 0.971 0.955 0.947 0.967 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
56. M110.4 ifg-1 25579 7.585 0.981 0.979 0.946 0.979 0.934 0.954 0.953 0.859 Initiation Factor 4G (eIF4G) family [Source:RefSeq peptide;Acc:NP_001129819]
57. F58G11.1 letm-1 13414 7.582 0.916 0.939 0.943 0.939 0.960 0.975 0.959 0.951 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
58. B0412.3 trpp-11 4712 7.582 0.925 0.964 0.917 0.964 0.962 0.960 0.956 0.934 TRansport Protein Particle [Source:RefSeq peptide;Acc:NP_497264]
59. F56B3.12 skr-18 6534 7.581 0.942 0.945 0.957 0.945 0.972 0.929 0.906 0.985 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
60. W03F9.5 ttb-1 8682 7.578 0.933 0.939 0.917 0.939 0.961 0.984 0.954 0.951 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
61. F19B6.2 ufd-1 15357 7.578 0.944 0.943 0.968 0.943 0.962 0.919 0.924 0.975 Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
62. C47B2.4 pbs-2 19805 7.577 0.948 0.949 0.934 0.949 0.981 0.932 0.916 0.968 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
63. T27F7.3 eif-1 28176 7.575 0.937 0.964 0.977 0.964 0.980 0.944 0.885 0.924 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
64. C50F7.4 sucg-1 5175 7.573 0.954 0.958 0.937 0.958 0.945 0.934 0.917 0.970 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53589]
65. F23F1.8 rpt-4 14303 7.572 0.961 0.934 0.919 0.934 0.954 0.968 0.959 0.943 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
66. B0511.10 eif-3.E 10041 7.57 0.935 0.961 0.930 0.961 0.975 0.950 0.899 0.959 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
67. C34B2.6 C34B2.6 7529 7.565 0.944 0.966 0.962 0.966 0.981 0.925 0.924 0.897 Lon protease homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O44952]
68. ZK381.4 pgl-1 20651 7.565 0.949 0.966 0.962 0.966 0.941 0.903 0.934 0.944 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
69. ZK1236.7 ufbp-1 6217 7.564 0.956 0.949 0.909 0.949 0.968 0.965 0.953 0.915 DDRGK domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34623]
70. Y48B6A.14 hmg-1.1 88723 7.562 0.908 0.951 0.948 0.951 0.948 0.958 0.934 0.964 HMG [Source:RefSeq peptide;Acc:NP_496970]
71. Y40B1B.5 eif-3.J 15061 7.561 0.961 0.965 0.979 0.965 0.967 0.913 0.876 0.935 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
72. Y38A8.2 pbs-3 18117 7.561 0.938 0.940 0.921 0.940 0.980 0.956 0.940 0.946 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
73. C03C10.1 kin-19 53180 7.559 0.944 0.961 0.964 0.961 0.937 0.963 0.931 0.898 Casein kinase I isoform alpha [Source:UniProtKB/Swiss-Prot;Acc:P42168]
74. Y47D3A.29 Y47D3A.29 9472 7.557 0.916 0.947 0.938 0.947 0.984 0.954 0.945 0.926 DNA polymerase [Source:RefSeq peptide;Acc:NP_001255109]
75. B0464.5 spk-1 35112 7.556 0.941 0.971 0.959 0.971 0.932 0.953 0.922 0.907 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
76. DY3.2 lmn-1 22449 7.554 0.952 0.935 0.952 0.935 0.961 0.976 0.924 0.919 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
77. T01G1.3 sec-31 10504 7.552 0.935 0.941 0.945 0.941 0.970 0.972 0.922 0.926 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
78. F36F2.3 rbpl-1 15376 7.551 0.930 0.965 0.909 0.965 0.961 0.961 0.935 0.925 Retinoblastoma Binding Protein Like [Source:RefSeq peptide;Acc:NP_001032975]
79. F08F8.10 F08F8.10 2087 7.55 0.960 0.934 0.899 0.934 0.968 0.973 0.955 0.927
80. F39B2.2 uev-1 13597 7.55 0.922 0.962 0.942 0.962 0.978 0.912 0.910 0.962 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
81. CD4.6 pas-6 18332 7.548 0.915 0.932 0.915 0.932 0.958 0.982 0.952 0.962 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
82. C06E7.1 sams-3 26921 7.548 0.960 0.958 0.957 0.958 0.973 0.923 0.887 0.932 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
83. F26F4.10 rars-1 9971 7.546 0.949 0.959 0.971 0.959 0.964 0.926 0.888 0.930 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
84. R144.7 larp-1 24669 7.54 0.966 0.983 0.968 0.983 0.939 0.906 0.869 0.926 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
85. K08D12.1 pbs-1 21677 7.539 0.948 0.932 0.902 0.932 0.957 0.971 0.935 0.962 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
86. F48E8.6 disl-2 8774 7.538 0.927 0.935 0.930 0.935 0.975 0.983 0.930 0.923 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
87. R10H10.1 lpd-8 4272 7.538 0.937 0.934 0.951 0.934 0.937 0.967 0.951 0.927 LiPid Depleted [Source:RefSeq peptide;Acc:NP_501917]
88. K11D2.3 unc-101 5587 7.537 0.911 0.919 0.941 0.919 0.980 0.968 0.940 0.959 AP-1 complex subunit mu-1-I [Source:UniProtKB/Swiss-Prot;Acc:P35602]
89. K07H8.3 daf-31 10678 7.536 0.947 0.962 0.970 0.962 0.927 0.958 0.880 0.930 N-alpha-acetyltransferase daf-31 [Source:UniProtKB/Swiss-Prot;Acc:O61219]
90. Y119D3B.15 dss-1 19116 7.536 0.939 0.953 0.981 0.953 0.959 0.941 0.866 0.944 Probable 26S proteasome complex subunit dss-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y72]
91. F36A4.7 ama-1 13620 7.535 0.930 0.966 0.965 0.966 0.959 0.939 0.870 0.940 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
92. Y61A9LA.8 sut-2 11388 7.535 0.937 0.948 0.916 0.948 0.969 0.960 0.934 0.923 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
93. ZK328.5 npp-10 7652 7.529 0.865 0.947 0.925 0.947 0.985 0.967 0.934 0.959 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
94. Y49E10.2 glrx-5 9672 7.528 0.936 0.938 0.952 0.938 0.969 0.949 0.916 0.930 Glutaredoxin [Source:RefSeq peptide;Acc:NP_499610]
95. F56D1.7 daz-1 23684 7.528 0.968 0.960 0.943 0.960 0.963 0.918 0.898 0.918 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
96. F10G8.3 rae-1 7542 7.527 0.968 0.934 0.952 0.934 0.968 0.904 0.949 0.918 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
97. Y50D7A.4 hpo-29 12443 7.526 0.940 0.932 0.958 0.932 0.923 0.987 0.944 0.910
98. F18E2.3 scc-3 13464 7.525 0.927 0.940 0.914 0.940 0.982 0.953 0.967 0.902 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
99. T24B8.2 T24B8.2 2167 7.524 0.958 0.913 0.928 0.913 0.963 0.975 0.948 0.926
100. K07A12.3 asg-1 17070 7.524 0.942 0.931 0.898 0.931 0.975 0.965 0.923 0.959 Probable ATP synthase subunit g 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90921]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA