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Results for B0280.1

Gene ID Gene Name Reads Transcripts Annotation
B0280.1 ggtb-1 3076 B0280.1a, B0280.1b Probable geranylgeranyl transferase type-2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P41992]

Genes with expression patterns similar to B0280.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0280.1 ggtb-1 3076 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable geranylgeranyl transferase type-2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P41992]
2. K07C5.1 arx-2 20142 7.579 0.969 0.975 0.954 0.975 0.965 0.907 0.919 0.915 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
3. B0285.1 cdk-12 5900 7.54 0.943 0.961 0.946 0.961 0.982 0.915 0.904 0.928 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
4. M01B12.3 arx-7 7584 7.538 0.977 0.930 0.949 0.930 0.968 0.945 0.962 0.877 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
5. C38C10.2 slc-17.2 6819 7.531 0.934 0.965 0.972 0.965 0.949 0.900 0.963 0.883 Uncharacterized transporter slc-17.2 [Source:UniProtKB/Swiss-Prot;Acc:Q03567]
6. T05C12.7 cct-1 41264 7.529 0.961 0.971 0.933 0.971 0.970 0.897 0.949 0.877 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
7. T24F1.1 raga-1 16171 7.519 0.957 0.981 0.947 0.981 0.953 0.918 0.951 0.831 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
8. F38A5.1 odr-8 5283 7.516 0.943 0.977 0.954 0.977 0.942 0.930 0.922 0.871 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
9. Y39G10AR.20 tbca-1 4155 7.509 0.953 0.954 0.892 0.954 0.974 0.946 0.935 0.901 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
10. F11A10.6 F11A10.6 8364 7.483 0.910 0.979 0.960 0.979 0.970 0.928 0.907 0.850
11. R06A4.4 imb-2 10302 7.479 0.942 0.969 0.969 0.969 0.979 0.815 0.957 0.879 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
12. R06C1.2 fdps-1 4504 7.478 0.917 0.977 0.921 0.977 0.946 0.906 0.941 0.893 Farnesyl DiPhosphate Synthetase [Source:RefSeq peptide;Acc:NP_493027]
13. F43G9.5 cfim-1 9169 7.473 0.974 0.980 0.971 0.980 0.983 0.770 0.957 0.858 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
14. W06D4.5 snx-3 13450 7.464 0.970 0.955 0.954 0.955 0.928 0.938 0.878 0.886 Sorting NeXin [Source:RefSeq peptide;Acc:NP_492437]
15. R07E5.11 R07E5.11 1170 7.464 0.954 0.931 0.962 0.931 0.961 0.940 0.911 0.874
16. Y105E8A.22 exc-4 6168 7.463 0.953 0.944 0.944 0.944 0.961 0.888 0.950 0.879 Chloride intracellular channel exc-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8WQA4]
17. R07E5.14 rnp-4 11659 7.463 0.967 0.961 0.960 0.961 0.976 0.835 0.954 0.849 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
18. Y54E5B.4 ubc-16 8386 7.462 0.908 0.976 0.949 0.976 0.972 0.927 0.927 0.827 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_493587]
19. K11D12.2 pqn-51 15951 7.462 0.950 0.986 0.960 0.986 0.968 0.815 0.920 0.877 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
20. K04G2.2 aho-3 15189 7.462 0.888 0.974 0.943 0.974 0.974 0.823 0.964 0.922
21. ZK1128.8 vps-29 5118 7.453 0.952 0.972 0.954 0.972 0.921 0.958 0.827 0.897 Vacuolar protein sorting-associated protein 29 [Source:RefSeq peptide;Acc:NP_001022987]
22. K07A1.12 lin-53 15817 7.453 0.931 0.973 0.962 0.973 0.970 0.819 0.953 0.872 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
23. ZK863.6 dpy-30 16177 7.45 0.959 0.961 0.916 0.961 0.962 0.868 0.965 0.858 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
24. K08E7.1 eak-7 18960 7.448 0.954 0.965 0.947 0.965 0.965 0.864 0.911 0.877 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
25. F43G6.9 patr-1 23000 7.446 0.870 0.971 0.927 0.971 0.975 0.901 0.930 0.901 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
26. T26E3.3 par-6 8650 7.443 0.912 0.971 0.960 0.971 0.970 0.886 0.903 0.870 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
27. Y106G6A.5 dsbn-1 7130 7.442 0.924 0.971 0.964 0.971 0.962 0.895 0.896 0.859 Dysbindin protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XWQ1]
28. B0035.4 pfd-4 5006 7.44 0.951 0.921 0.938 0.921 0.942 0.940 0.920 0.907 Probable prefoldin subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q17435]
29. T20D3.7 vps-26 9349 7.438 0.964 0.982 0.939 0.982 0.933 0.837 0.956 0.845 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
30. T26A5.9 dlc-1 59038 7.434 0.974 0.961 0.953 0.961 0.918 0.929 0.912 0.826 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
31. C53A5.3 hda-1 18413 7.427 0.926 0.990 0.949 0.990 0.951 0.851 0.946 0.824 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
32. F01F1.8 cct-6 29460 7.426 0.951 0.946 0.936 0.946 0.966 0.802 0.962 0.917 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
33. C07H6.4 C07H6.4 6595 7.423 0.906 0.948 0.955 0.948 0.953 0.898 0.930 0.885
34. D1046.1 cfim-2 4266 7.422 0.941 0.967 0.929 0.967 0.950 0.845 0.936 0.887 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_001255355]
35. Y71G12B.12 atg-5 5575 7.42 0.920 0.976 0.924 0.976 0.955 0.912 0.862 0.895 Autophagy protein 5 [Source:RefSeq peptide;Acc:NP_001293440]
36. R07E5.10 pdcd-2 5211 7.416 0.943 0.953 0.903 0.953 0.945 0.961 0.887 0.871 Vacuolar ATPase assembly integral membrane protein VMA21 homolog [Source:UniProtKB/Swiss-Prot;Acc:A5JYQ9]
37. C35D10.16 arx-6 8242 7.414 0.975 0.947 0.958 0.947 0.952 0.878 0.903 0.854 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
38. Y59A8B.22 snx-6 9350 7.414 0.950 0.979 0.952 0.979 0.919 0.944 0.824 0.867 Sorting NeXin [Source:RefSeq peptide;Acc:NP_001256763]
39. T03F6.5 lis-1 8818 7.411 0.959 0.933 0.940 0.933 0.962 0.918 0.936 0.830 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
40. Y92C3B.3 rab-18 12556 7.404 0.949 0.967 0.932 0.967 0.949 0.964 0.854 0.822 Ras-related protein Rab-18 [Source:UniProtKB/Swiss-Prot;Acc:Q8MXS1]
41. K11H3.6 mrpl-36 7328 7.402 0.957 0.956 0.971 0.956 0.968 0.772 0.953 0.869 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
42. C36A4.5 maph-1.3 15493 7.398 0.898 0.953 0.971 0.953 0.984 0.843 0.953 0.843 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
43. F10G8.6 nubp-1 3262 7.397 0.964 0.941 0.924 0.941 0.967 0.911 0.893 0.856 Cytosolic Fe-S cluster assembly factor NUBP1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93459]
44. Y47D3A.27 teg-1 5171 7.395 0.883 0.964 0.959 0.964 0.958 0.926 0.903 0.838 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_499455]
45. C15H11.4 dhs-22 21674 7.395 0.951 0.964 0.939 0.964 0.928 0.869 0.923 0.857 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
46. Y41D4B.13 ced-2 10100 7.394 0.895 0.966 0.946 0.966 0.983 0.859 0.940 0.839 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
47. W07A8.3 dnj-25 5970 7.392 0.913 0.972 0.940 0.972 0.974 0.899 0.905 0.817 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001256947]
48. Y79H2A.6 arx-3 17398 7.39 0.932 0.966 0.971 0.966 0.927 0.900 0.869 0.859 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
49. K07D4.3 rpn-11 8834 7.388 0.917 0.956 0.948 0.956 0.976 0.885 0.948 0.802 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
50. F57B9.10 rpn-6.1 20218 7.387 0.949 0.969 0.933 0.969 0.903 0.939 0.898 0.827 Probable 26S proteasome regulatory subunit rpn-6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20938]
51. B0205.9 B0205.9 3651 7.376 0.952 0.980 0.886 0.980 0.945 0.827 0.952 0.854
52. C48G7.3 rin-1 9029 7.375 0.898 0.985 0.949 0.985 0.971 0.915 0.843 0.829 RIN (Ras/Rab INteractor) homolog [Source:RefSeq peptide;Acc:NP_001263893]
53. Y43F4B.4 npp-18 4780 7.372 0.953 0.981 0.972 0.981 0.974 0.816 0.945 0.750 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
54. D1022.1 ubc-6 9722 7.372 0.956 0.983 0.975 0.983 0.940 0.880 0.860 0.795 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
55. F32A5.7 lsm-4 3785 7.371 0.945 0.965 0.932 0.965 0.950 0.818 0.956 0.840 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
56. Y49E10.6 his-72 32293 7.371 0.927 0.951 0.934 0.951 0.959 0.853 0.884 0.912 Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U281]
57. C48B6.3 C48B6.3 6610 7.37 0.919 0.975 0.920 0.975 0.957 0.791 0.942 0.891
58. Y38C9A.2 cgp-1 11756 7.369 0.907 0.974 0.907 0.974 0.951 0.808 0.941 0.907 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
59. C42C1.10 hpo-12 3861 7.365 0.912 0.948 0.965 0.948 0.947 0.884 0.908 0.853
60. Y57G11C.36 Y57G11C.36 10590 7.365 0.878 0.963 0.944 0.963 0.948 0.938 0.890 0.841
61. F01F1.4 rabn-5 5269 7.364 0.902 0.976 0.939 0.976 0.967 0.857 0.887 0.860 RABaptiN (rab effector) [Source:RefSeq peptide;Acc:NP_498266]
62. C15H11.3 nxf-1 9528 7.362 0.958 0.950 0.964 0.950 0.912 0.894 0.927 0.807 Nuclear RNA export factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS7]
63. F33D4.7 emc-6 6534 7.36 0.973 0.929 0.960 0.929 0.946 0.860 0.913 0.850 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
64. F08F8.3 kap-1 31437 7.36 0.957 0.971 0.917 0.971 0.931 0.851 0.925 0.837 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
65. F55C5.7 rskd-1 4814 7.359 0.926 0.965 0.927 0.965 0.941 0.909 0.855 0.871 Ribosomal protein S6 Kinase Delta homolog [Source:RefSeq peptide;Acc:NP_506082]
66. T19C3.8 fem-2 9225 7.359 0.918 0.978 0.953 0.978 0.967 0.839 0.908 0.818 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
67. ZK858.4 mel-26 15994 7.358 0.900 0.974 0.957 0.974 0.934 0.929 0.878 0.812 Protein maternal effect lethal 26 [Source:UniProtKB/Swiss-Prot;Acc:Q94420]
68. C52E4.3 snr-4 19308 7.358 0.956 0.942 0.917 0.942 0.964 0.862 0.902 0.873 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
69. B0205.11 mrpl-9 9162 7.356 0.940 0.960 0.913 0.960 0.965 0.834 0.935 0.849 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
70. Y53C10A.12 hsf-1 7899 7.355 0.900 0.973 0.936 0.973 0.962 0.794 0.962 0.855 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
71. C08F8.1 pfd-1 10199 7.355 0.966 0.930 0.878 0.930 0.975 0.838 0.945 0.893 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
72. R07H5.1 prx-14 5489 7.355 0.915 0.945 0.976 0.945 0.896 0.941 0.905 0.832 PeRoXisome assembly factor [Source:RefSeq peptide;Acc:NP_502097]
73. C18E9.3 szy-20 6819 7.353 0.940 0.966 0.926 0.966 0.978 0.767 0.933 0.877 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
74. F09G2.9 attf-2 14771 7.353 0.915 0.976 0.936 0.976 0.950 0.825 0.953 0.822 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
75. F13G3.4 dylt-1 21345 7.351 0.935 0.951 0.959 0.951 0.957 0.862 0.884 0.852 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
76. D2092.5 maco-1 7931 7.35 0.930 0.961 0.971 0.961 0.955 0.790 0.922 0.860 MACOilin homolog [Source:RefSeq peptide;Acc:NP_491902]
77. C07G2.3 cct-5 44703 7.35 0.930 0.919 0.906 0.919 0.962 0.887 0.964 0.863 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
78. F58G11.6 ccz-1 5655 7.348 0.902 0.973 0.930 0.973 0.966 0.767 0.945 0.892
79. Y6D11A.2 arx-4 3777 7.348 0.980 0.952 0.981 0.952 0.950 0.928 0.871 0.734 Probable actin-related protein 2/3 complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8WTM6]
80. ZK973.11 ZK973.11 2422 7.347 0.936 0.932 0.949 0.932 0.966 0.853 0.922 0.857
81. R07B7.3 pqn-53 10459 7.344 0.958 0.931 0.913 0.931 0.961 0.889 0.909 0.852 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
82. R74.8 R74.8 7722 7.344 0.943 0.979 0.944 0.979 0.964 0.827 0.950 0.758
83. D2013.2 wdfy-2 7286 7.344 0.959 0.972 0.930 0.972 0.965 0.821 0.846 0.879 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
84. ZK1058.4 ccdc-47 8879 7.343 0.942 0.944 0.940 0.944 0.960 0.827 0.905 0.881 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
85. ZK637.3 lnkn-1 16095 7.343 0.922 0.955 0.928 0.955 0.939 0.895 0.911 0.838 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
86. Y71F9B.4 snr-7 13542 7.342 0.950 0.939 0.915 0.939 0.970 0.799 0.952 0.878 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
87. Y54E10A.5 dnc-6 4442 7.342 0.955 0.944 0.937 0.944 0.954 0.829 0.890 0.889 Dynactin subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3F1]
88. C17H12.13 anat-1 12995 7.341 0.947 0.972 0.936 0.972 0.978 0.732 0.934 0.870 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
89. Y71F9AL.16 arx-1 7692 7.341 0.930 0.966 0.966 0.966 0.930 0.956 0.820 0.807 Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I0]
90. Y48G1C.2 csk-1 6388 7.341 0.935 0.968 0.961 0.968 0.922 0.860 0.904 0.823 Tyrosine-protein kinase csk-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ECJ6]
91. W04D2.5 mrps-11 5757 7.34 0.958 0.942 0.923 0.942 0.965 0.843 0.899 0.868 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
92. F53F4.3 tbcb-1 6442 7.339 0.946 0.957 0.942 0.957 0.959 0.807 0.893 0.878 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
93. F54C1.3 mes-3 4125 7.339 0.959 0.952 0.964 0.952 0.946 0.828 0.917 0.821 Polycomb protein mes-3 [Source:UniProtKB/Swiss-Prot;Acc:Q10665]
94. ZK1251.9 dcaf-1 10926 7.338 0.885 0.966 0.954 0.966 0.980 0.791 0.919 0.877 DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21106]
95. Y53C12A.6 Y53C12A.6 1631 7.338 0.964 0.939 0.945 0.939 0.909 0.843 0.891 0.908
96. T08B2.9 fars-1 12650 7.338 0.955 0.962 0.936 0.962 0.957 0.823 0.924 0.819 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
97. C26E6.7 eri-9 8069 7.336 0.917 0.984 0.921 0.984 0.957 0.757 0.936 0.880 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
98. Y40G12A.1 ubh-3 4142 7.336 0.954 0.941 0.915 0.941 0.953 0.818 0.943 0.871 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
99. R11A5.2 nud-2 15326 7.334 0.942 0.961 0.961 0.961 0.958 0.751 0.931 0.869 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_492172]
100. C01F6.8 icln-1 6586 7.334 0.928 0.961 0.925 0.961 0.962 0.761 0.942 0.894 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA