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Results for Y38C1AA.2

Gene ID Gene Name Reads Transcripts Annotation
Y38C1AA.2 csn-3 3451 Y38C1AA.2 COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N425]

Genes with expression patterns similar to Y38C1AA.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y38C1AA.2 csn-3 3451 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N425]
2. W03F9.5 ttb-1 8682 7.663 0.974 0.958 0.982 0.958 0.935 0.962 0.967 0.927 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
3. D2089.1 rsp-7 11057 7.662 0.965 0.971 0.980 0.971 0.935 0.990 0.922 0.928 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
4. F46B6.3 smg-4 4959 7.662 0.962 0.975 0.979 0.975 0.917 0.962 0.940 0.952 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
5. F58B6.3 par-2 3914 7.643 0.969 0.963 0.970 0.963 0.933 0.964 0.927 0.954
6. T17E9.1 kin-18 8172 7.626 0.949 0.952 0.980 0.952 0.957 0.931 0.948 0.957 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
7. Y53C12A.4 mop-25.2 7481 7.623 0.968 0.962 0.975 0.962 0.943 0.976 0.919 0.918 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
8. Y113G7B.23 swsn-1 13766 7.62 0.977 0.963 0.982 0.963 0.885 0.984 0.950 0.916 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
9. F18E2.3 scc-3 13464 7.616 0.975 0.953 0.981 0.953 0.924 0.934 0.951 0.945 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
10. F39H11.5 pbs-7 13631 7.614 0.965 0.956 0.983 0.956 0.941 0.954 0.951 0.908 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
11. T12E12.4 drp-1 7694 7.61 0.961 0.968 0.977 0.968 0.939 0.977 0.940 0.880 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
12. F56A3.3 npp-6 5425 7.609 0.968 0.957 0.981 0.957 0.893 0.964 0.946 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
13. Y73F8A.34 tag-349 7966 7.605 0.966 0.959 0.984 0.959 0.910 0.955 0.920 0.952
14. T10C6.4 srx-44 8454 7.602 0.968 0.958 0.976 0.958 0.914 0.976 0.943 0.909 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
15. C50C3.6 prp-8 19582 7.602 0.939 0.958 0.976 0.958 0.888 0.984 0.947 0.952 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
16. T05F1.6 hsr-9 13312 7.601 0.961 0.961 0.988 0.961 0.882 0.938 0.955 0.955
17. K07C5.8 cash-1 10523 7.599 0.979 0.950 0.982 0.950 0.938 0.933 0.971 0.896 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
18. T10F2.4 prp-19 11298 7.597 0.976 0.967 0.970 0.967 0.890 0.977 0.920 0.930 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
19. F59B2.7 rab-6.1 10749 7.59 0.964 0.949 0.985 0.949 0.922 0.938 0.932 0.951 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
20. Y47G6A.20 rnp-6 5542 7.59 0.955 0.955 0.971 0.955 0.961 0.979 0.920 0.894 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
21. R02D3.5 fnta-1 5258 7.589 0.978 0.941 0.971 0.941 0.882 0.966 0.947 0.963 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
22. Y71D11A.2 smr-1 4976 7.588 0.960 0.959 0.968 0.959 0.929 0.989 0.927 0.897 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
23. Y49E10.3 pph-4.2 8662 7.588 0.917 0.959 0.980 0.959 0.929 0.947 0.934 0.963 Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
24. C35D10.7 C35D10.7 2964 7.587 0.941 0.957 0.976 0.957 0.957 0.975 0.924 0.900
25. F35G12.8 smc-4 6202 7.586 0.957 0.948 0.963 0.948 0.918 0.963 0.923 0.966 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
26. F01G4.3 skih-2 3353 7.582 0.955 0.944 0.967 0.944 0.964 0.959 0.909 0.940 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
27. K02F2.1 dpf-3 11465 7.581 0.955 0.964 0.986 0.964 0.921 0.988 0.918 0.885 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
28. Y38A8.2 pbs-3 18117 7.581 0.969 0.953 0.983 0.953 0.955 0.979 0.928 0.861 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
29. F28B3.7 him-1 18274 7.581 0.946 0.956 0.986 0.956 0.903 0.970 0.936 0.928 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
30. Y110A7A.8 prp-31 4436 7.58 0.974 0.953 0.961 0.953 0.912 0.969 0.928 0.930 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
31. T01G9.4 npp-2 5361 7.577 0.947 0.964 0.966 0.964 0.924 0.906 0.963 0.943 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
32. C45G3.5 gip-2 2230 7.574 0.914 0.973 0.958 0.973 0.955 0.962 0.882 0.957 Gamma-tubulin Interacting Protein [Source:RefSeq peptide;Acc:NP_001021044]
33. B0025.2 csn-2 5205 7.573 0.947 0.941 0.961 0.941 0.927 0.961 0.943 0.952 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
34. C29E4.2 kle-2 5527 7.57 0.956 0.944 0.979 0.944 0.927 0.966 0.900 0.954 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
35. F16D3.2 rsd-6 8211 7.57 0.943 0.957 0.971 0.957 0.932 0.945 0.935 0.930
36. C36B1.8 gls-1 8617 7.569 0.961 0.937 0.977 0.937 0.903 0.968 0.947 0.939 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
37. Y55D9A.1 efa-6 10012 7.569 0.929 0.953 0.984 0.953 0.910 0.957 0.951 0.932 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
38. C09G4.3 cks-1 17852 7.566 0.963 0.940 0.971 0.940 0.917 0.974 0.956 0.905 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
39. F56A8.6 cpf-2 2730 7.565 0.952 0.948 0.964 0.948 0.933 0.968 0.950 0.902 Cleavage and Polyadenylation Factor [Source:RefSeq peptide;Acc:NP_499734]
40. B0205.1 B0205.1 2403 7.565 0.958 0.945 0.975 0.945 0.953 0.936 0.950 0.903
41. Y48G8AL.6 smg-2 12561 7.564 0.947 0.950 0.957 0.950 0.924 0.981 0.944 0.911 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
42. Y54E10A.9 vbh-1 28746 7.563 0.956 0.948 0.946 0.948 0.911 0.970 0.952 0.932 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
43. T23B12.4 natc-1 7759 7.563 0.953 0.945 0.967 0.945 0.950 0.899 0.975 0.929 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
44. C48E7.3 lpd-2 10330 7.563 0.957 0.970 0.981 0.970 0.895 0.955 0.908 0.927 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
45. T12D8.6 mlc-5 19567 7.563 0.967 0.957 0.967 0.957 0.916 0.961 0.928 0.910 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
46. K10C3.2 ensa-1 19836 7.562 0.968 0.954 0.981 0.954 0.862 0.975 0.941 0.927 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
47. F37A4.8 isw-1 9337 7.561 0.972 0.958 0.987 0.958 0.939 0.922 0.946 0.879 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
48. F44A2.1 tag-153 16535 7.558 0.977 0.954 0.974 0.954 0.887 0.936 0.963 0.913
49. F41E6.4 smk-1 22394 7.558 0.948 0.940 0.982 0.940 0.925 0.970 0.952 0.901 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
50. F52C9.8 pqe-1 7546 7.557 0.916 0.971 0.963 0.971 0.943 0.955 0.930 0.908 Putative RNA exonuclease pqe-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10124]
51. C05C8.4 gei-6 6026 7.557 0.940 0.940 0.968 0.940 0.949 0.965 0.901 0.954 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
52. T10F2.3 ulp-1 8351 7.557 0.955 0.935 0.963 0.935 0.914 0.940 0.955 0.960 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
53. F46F11.10 F46F11.10 968 7.556 0.945 0.944 0.977 0.944 0.924 0.924 0.961 0.937
54. Y56A3A.20 ccf-1 18463 7.556 0.961 0.953 0.985 0.953 0.909 0.972 0.903 0.920 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
55. Y105E8A.17 ekl-4 4732 7.556 0.965 0.955 0.956 0.955 0.925 0.956 0.922 0.922
56. D1081.9 D1081.9 3792 7.555 0.945 0.945 0.976 0.945 0.911 0.961 0.951 0.921
57. F55B12.3 sel-10 10304 7.555 0.977 0.974 0.958 0.974 0.919 0.906 0.945 0.902 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
58. K08D12.1 pbs-1 21677 7.554 0.975 0.962 0.978 0.962 0.881 0.956 0.932 0.908 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
59. Y81G3A.3 gcn-2 5831 7.554 0.966 0.942 0.968 0.942 0.926 0.974 0.897 0.939 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
60. C18D11.4 rsp-8 18308 7.554 0.952 0.951 0.948 0.951 0.913 0.987 0.925 0.927 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
61. ZK1127.4 ZK1127.4 3088 7.554 0.962 0.941 0.977 0.941 0.904 0.939 0.942 0.948 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
62. T13H5.7 rnh-2 3204 7.553 0.970 0.958 0.978 0.958 0.915 0.955 0.910 0.909 Ribonuclease H2 subunit A [Source:UniProtKB/Swiss-Prot;Acc:Q9U6P6]
63. Y11D7A.12 flh-1 4612 7.553 0.916 0.941 0.966 0.941 0.930 0.966 0.943 0.950 FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501618]
64. F39B2.2 uev-1 13597 7.552 0.952 0.960 0.962 0.960 0.924 0.934 0.942 0.918 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
65. T23B12.7 dnj-22 2874 7.552 0.948 0.945 0.961 0.945 0.923 0.933 0.936 0.961 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_505178]
66. C02F5.9 pbs-6 20120 7.552 0.960 0.954 0.974 0.954 0.942 0.924 0.946 0.898 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
67. T20B12.2 tbp-1 9014 7.55 0.961 0.959 0.977 0.959 0.952 0.917 0.907 0.918 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
68. W01B6.9 ndc-80 4670 7.549 0.950 0.938 0.968 0.938 0.918 0.924 0.953 0.960 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
69. F22D6.3 nars-1 18624 7.549 0.958 0.974 0.963 0.974 0.880 0.960 0.921 0.919 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
70. F17C11.10 F17C11.10 4355 7.549 0.945 0.952 0.979 0.952 0.912 0.961 0.948 0.900
71. R144.4 wip-1 14168 7.548 0.962 0.949 0.980 0.949 0.902 0.958 0.946 0.902 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
72. F58G11.1 letm-1 13414 7.548 0.959 0.954 0.974 0.954 0.919 0.962 0.933 0.893 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
73. B0495.6 moa-2 6366 7.547 0.957 0.929 0.973 0.929 0.895 0.969 0.943 0.952
74. F54C8.5 rheb-1 6358 7.547 0.958 0.969 0.975 0.969 0.910 0.978 0.893 0.895 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
75. T06D8.6 cchl-1 26292 7.546 0.967 0.961 0.962 0.961 0.929 0.938 0.945 0.883 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
76. C36B1.4 pas-4 13140 7.546 0.962 0.945 0.967 0.945 0.926 0.972 0.933 0.896 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
77. Y71F9B.16 dnj-30 4262 7.546 0.953 0.953 0.978 0.953 0.906 0.955 0.928 0.920 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
78. Y92C3B.2 uaf-1 14981 7.546 0.982 0.961 0.966 0.961 0.935 0.931 0.925 0.885 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
79. Y67H2A.6 csn-6 3098 7.544 0.945 0.954 0.934 0.954 0.913 0.974 0.925 0.945 COP9 signalosome complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ0]
80. B0464.9 B0464.9 2997 7.544 0.939 0.959 0.960 0.959 0.893 0.946 0.934 0.954 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
81. T20H4.3 pars-1 8167 7.543 0.941 0.949 0.955 0.949 0.938 0.981 0.930 0.900 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
82. K12D12.1 top-2 18694 7.542 0.950 0.943 0.963 0.943 0.940 0.956 0.920 0.927 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
83. T20G5.11 rde-4 3966 7.542 0.974 0.947 0.981 0.947 0.852 0.949 0.936 0.956 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
84. Y39G10AL.3 cdk-7 3495 7.542 0.954 0.959 0.974 0.959 0.927 0.946 0.926 0.897 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
85. C07G1.4 wsp-1 11226 7.542 0.956 0.949 0.981 0.949 0.892 0.954 0.928 0.933 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
86. CD4.6 pas-6 18332 7.541 0.975 0.955 0.962 0.955 0.887 0.947 0.947 0.913 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
87. F55C5.8 srpa-68 6665 7.541 0.970 0.941 0.949 0.941 0.917 0.963 0.918 0.942 Probable signal recognition particle subunit SRP68 [Source:UniProtKB/Swiss-Prot;Acc:Q20822]
88. C25A1.5 C25A1.5 9135 7.54 0.958 0.946 0.976 0.946 0.904 0.966 0.935 0.909
89. C08B11.5 sap-49 10553 7.54 0.963 0.957 0.952 0.957 0.890 0.962 0.932 0.927 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
90. Y71G12B.1 chaf-2 3451 7.54 0.968 0.945 0.940 0.945 0.924 0.946 0.947 0.925 CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
91. Y43C5A.6 rad-51 5327 7.54 0.970 0.949 0.973 0.949 0.934 0.939 0.909 0.917 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
92. C09G12.9 tsg-101 9451 7.539 0.980 0.951 0.977 0.951 0.888 0.952 0.956 0.884 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
93. C43E11.1 acin-1 7781 7.539 0.933 0.972 0.978 0.972 0.899 0.948 0.925 0.912 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
94. B0334.5 B0334.5 4713 7.539 0.941 0.956 0.963 0.956 0.935 0.944 0.931 0.913
95. ZC404.9 gck-2 8382 7.539 0.941 0.964 0.988 0.964 0.928 0.928 0.912 0.914 Mitogen-activated protein kinase kinase kinase kinase [Source:RefSeq peptide;Acc:NP_504721]
96. E01A2.4 let-504 9788 7.539 0.951 0.963 0.947 0.963 0.866 0.943 0.936 0.970
97. F32H2.4 thoc-3 3861 7.538 0.956 0.951 0.979 0.951 0.895 0.956 0.908 0.942 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
98. F10B5.6 emb-27 2578 7.537 0.964 0.944 0.932 0.944 0.949 0.951 0.916 0.937 APC6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG38]
99. F46A9.4 skr-2 16831 7.537 0.964 0.950 0.966 0.950 0.913 0.947 0.933 0.914 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
100. ZK20.3 rad-23 35070 7.537 0.978 0.944 0.987 0.944 0.903 0.956 0.924 0.901

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA