C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y54E10A.5

Gene ID Gene Name Reads Transcripts Annotation
Y54E10A.5 dnc-6 4442 Y54E10A.5.1, Y54E10A.5.2 Dynactin subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3F1]

Genes with expression patterns similar to Y54E10A.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y54E10A.5 dnc-6 4442 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Dynactin subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3F1]
2. Y111B2A.18 rsp-3 43731 7.599 0.978 0.971 0.974 0.971 0.989 0.866 0.936 0.914 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
3. F08F8.3 kap-1 31437 7.591 0.981 0.963 0.948 0.963 0.978 0.901 0.928 0.929 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
4. C15H11.4 dhs-22 21674 7.588 0.982 0.958 0.936 0.958 0.981 0.942 0.918 0.913 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
5. T19B4.2 npp-7 13073 7.58 0.972 0.980 0.941 0.980 0.970 0.926 0.906 0.905 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
6. F33D4.7 emc-6 6534 7.574 0.980 0.928 0.967 0.928 0.968 0.958 0.905 0.940 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
7. F32A5.7 lsm-4 3785 7.571 0.984 0.970 0.942 0.970 0.977 0.942 0.895 0.891 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
8. K01G5.4 ran-1 32379 7.569 0.980 0.968 0.953 0.968 0.986 0.883 0.927 0.904 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
9. R12C12.2 ran-5 14517 7.567 0.982 0.976 0.977 0.976 0.959 0.909 0.866 0.922 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
10. ZK616.6 perm-3 16186 7.563 0.977 0.947 0.951 0.947 0.979 0.931 0.941 0.890 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
11. Y47G6A.20 rnp-6 5542 7.561 0.974 0.967 0.966 0.967 0.968 0.897 0.932 0.890 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
12. K08E7.1 eak-7 18960 7.55 0.975 0.972 0.957 0.972 0.968 0.950 0.807 0.949 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
13. F52C9.7 mog-3 9880 7.547 0.968 0.976 0.965 0.976 0.961 0.896 0.879 0.926 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
14. M01B12.3 arx-7 7584 7.547 0.963 0.961 0.958 0.961 0.933 0.924 0.878 0.969 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
15. T04A8.14 emb-5 11746 7.544 0.949 0.977 0.958 0.977 0.970 0.932 0.879 0.902 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
16. T24F1.1 raga-1 16171 7.541 0.979 0.966 0.964 0.966 0.955 0.948 0.848 0.915 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
17. K03B4.2 K03B4.2 21796 7.541 0.978 0.968 0.921 0.968 0.964 0.904 0.920 0.918
18. R06A4.9 pfs-2 4733 7.541 0.966 0.970 0.955 0.970 0.964 0.908 0.861 0.947 Polyadenylation Factor Subunit homolog [Source:RefSeq peptide;Acc:NP_001293597]
19. T27F2.1 skp-1 3532 7.538 0.948 0.959 0.955 0.959 0.971 0.899 0.932 0.915 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
20. T12D8.3 acbp-5 6816 7.535 0.953 0.972 0.960 0.972 0.969 0.900 0.902 0.907 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
21. ZK1058.4 ccdc-47 8879 7.535 0.973 0.945 0.913 0.945 0.978 0.950 0.875 0.956 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
22. ZK863.6 dpy-30 16177 7.533 0.973 0.966 0.949 0.966 0.953 0.921 0.859 0.946 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
23. F23F1.1 nfyc-1 9983 7.53 0.966 0.964 0.972 0.964 0.963 0.891 0.930 0.880 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
24. R144.4 wip-1 14168 7.53 0.963 0.969 0.968 0.969 0.948 0.890 0.919 0.904 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
25. B0035.3 B0035.3 4118 7.529 0.965 0.958 0.957 0.958 0.961 0.922 0.890 0.918
26. K11D12.2 pqn-51 15951 7.529 0.979 0.966 0.953 0.966 0.982 0.928 0.851 0.904 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
27. F42A6.7 hrp-1 28201 7.527 0.984 0.963 0.955 0.963 0.978 0.874 0.929 0.881 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
28. Y43F4B.4 npp-18 4780 7.526 0.979 0.965 0.932 0.965 0.962 0.931 0.915 0.877 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
29. K07A1.12 lin-53 15817 7.524 0.968 0.975 0.968 0.975 0.949 0.916 0.865 0.908 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
30. C39E9.14 dli-1 5650 7.524 0.943 0.953 0.946 0.953 0.970 0.917 0.918 0.924 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
31. C36B1.3 rpb-3 4442 7.524 0.973 0.962 0.959 0.962 0.979 0.906 0.914 0.869 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
32. B0285.1 cdk-12 5900 7.522 0.971 0.945 0.969 0.945 0.953 0.940 0.848 0.951 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
33. C08B11.5 sap-49 10553 7.521 0.971 0.976 0.926 0.976 0.990 0.891 0.904 0.887 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
34. R07E5.11 R07E5.11 1170 7.52 0.977 0.900 0.972 0.900 0.963 0.925 0.927 0.956
35. F22D6.3 nars-1 18624 7.515 0.977 0.946 0.934 0.946 0.987 0.917 0.907 0.901 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
36. T08B2.9 fars-1 12650 7.513 0.968 0.927 0.917 0.927 0.984 0.944 0.928 0.918 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
37. T22C1.3 T22C1.3 2305 7.513 0.981 0.954 0.978 0.954 0.937 0.915 0.867 0.927
38. W02B12.3 rsp-1 9235 7.513 0.987 0.968 0.962 0.968 0.975 0.865 0.898 0.890 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
39. K10C3.2 ensa-1 19836 7.511 0.975 0.971 0.945 0.971 0.953 0.879 0.899 0.918 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
40. Y39G10AR.20 tbca-1 4155 7.51 0.966 0.962 0.943 0.962 0.962 0.920 0.886 0.909 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
41. H19N07.1 erfa-3 19869 7.508 0.968 0.939 0.939 0.939 0.987 0.922 0.887 0.927 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
42. R06A4.4 imb-2 10302 7.506 0.976 0.951 0.963 0.951 0.926 0.923 0.868 0.948 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
43. F28H1.3 aars-2 13537 7.504 0.965 0.952 0.932 0.952 0.974 0.921 0.884 0.924 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
44. Y102A5A.1 cand-1 11808 7.504 0.965 0.976 0.933 0.976 0.952 0.922 0.909 0.871 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
45. Y54E5A.4 npp-4 6288 7.503 0.975 0.961 0.956 0.961 0.979 0.910 0.846 0.915 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
46. F32H2.4 thoc-3 3861 7.503 0.964 0.980 0.947 0.980 0.976 0.928 0.820 0.908 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
47. T23H2.1 npp-12 12425 7.502 0.961 0.956 0.966 0.956 0.955 0.897 0.883 0.928 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
48. C02B10.5 C02B10.5 9171 7.502 0.986 0.928 0.963 0.928 0.961 0.926 0.914 0.896
49. F33E11.2 F33E11.2 5350 7.502 0.938 0.989 0.951 0.989 0.955 0.913 0.837 0.930
50. Y54E2A.3 tac-1 6308 7.499 0.968 0.949 0.943 0.949 0.985 0.895 0.883 0.927 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
51. K02F3.11 rnp-5 6205 7.499 0.968 0.970 0.955 0.970 0.960 0.904 0.896 0.876 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
52. F25B3.6 rtfo-1 11965 7.499 0.905 0.980 0.944 0.980 0.956 0.935 0.863 0.936 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
53. Y62E10A.11 mdt-9 5971 7.498 0.964 0.960 0.959 0.960 0.922 0.912 0.867 0.954 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
54. R05D11.3 ran-4 15494 7.496 0.981 0.971 0.947 0.971 0.964 0.893 0.848 0.921 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
55. T05F1.1 nra-2 7101 7.496 0.964 0.965 0.932 0.965 0.931 0.909 0.884 0.946 Nicalin [Source:RefSeq peptide;Acc:NP_492553]
56. C18A3.5 tiar-1 25400 7.495 0.974 0.967 0.965 0.967 0.974 0.887 0.873 0.888 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
57. T10F2.4 prp-19 11298 7.494 0.982 0.955 0.956 0.955 0.980 0.860 0.893 0.913 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
58. R10E11.3 usp-46 3909 7.493 0.954 0.967 0.942 0.967 0.954 0.940 0.907 0.862 Ubiquitin carboxyl-terminal hydrolase 46 [Source:UniProtKB/Swiss-Prot;Acc:P34547]
59. H17B01.4 emc-1 9037 7.492 0.935 0.970 0.932 0.970 0.962 0.941 0.852 0.930 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
60. K07C5.1 arx-2 20142 7.492 0.972 0.963 0.968 0.963 0.937 0.928 0.821 0.940 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
61. C25D7.8 otub-1 7941 7.491 0.976 0.953 0.949 0.953 0.976 0.904 0.833 0.947 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
62. W04D2.5 mrps-11 5757 7.491 0.974 0.939 0.930 0.939 0.970 0.955 0.905 0.879 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
63. ZK1010.3 frg-1 3533 7.49 0.977 0.962 0.958 0.962 0.963 0.934 0.838 0.896 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
64. T26A5.7 set-1 6948 7.49 0.924 0.974 0.948 0.974 0.975 0.859 0.904 0.932 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
65. Y113G7B.23 swsn-1 13766 7.49 0.978 0.960 0.956 0.960 0.943 0.906 0.900 0.887 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
66. C38C10.2 slc-17.2 6819 7.488 0.958 0.972 0.934 0.972 0.956 0.940 0.853 0.903 Uncharacterized transporter slc-17.2 [Source:UniProtKB/Swiss-Prot;Acc:Q03567]
67. C26E6.7 eri-9 8069 7.487 0.964 0.974 0.937 0.974 0.900 0.932 0.881 0.925 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
68. C33H5.12 rsp-6 23342 7.487 0.974 0.943 0.957 0.943 0.976 0.873 0.917 0.904 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
69. R07E5.14 rnp-4 11659 7.486 0.984 0.974 0.950 0.974 0.937 0.914 0.852 0.901 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
70. B0464.7 baf-1 10161 7.485 0.981 0.955 0.925 0.955 0.948 0.909 0.891 0.921 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
71. K07D4.3 rpn-11 8834 7.485 0.971 0.977 0.943 0.977 0.953 0.957 0.801 0.906 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
72. Y39G10AR.9 Y39G10AR.9 3972 7.484 0.953 0.957 0.896 0.957 0.969 0.942 0.924 0.886
73. F21C3.4 rde-2 6286 7.484 0.937 0.956 0.944 0.956 0.951 0.893 0.908 0.939
74. T21D12.3 pqbp-1.1 5755 7.483 0.962 0.957 0.973 0.957 0.949 0.871 0.907 0.907 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
75. T16G1.11 eif-3.K 14014 7.481 0.981 0.938 0.925 0.938 0.985 0.902 0.920 0.892 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
76. E01A2.2 E01A2.2 12356 7.481 0.970 0.960 0.955 0.960 0.964 0.906 0.869 0.897 Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
77. F13G3.4 dylt-1 21345 7.48 0.964 0.930 0.937 0.930 0.978 0.938 0.891 0.912 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
78. F43G9.5 cfim-1 9169 7.48 0.983 0.973 0.969 0.973 0.930 0.927 0.822 0.903 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
79. C28H8.9 dpff-1 8684 7.479 0.977 0.947 0.946 0.947 0.976 0.895 0.851 0.940 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
80. ZK742.1 xpo-1 20741 7.479 0.948 0.966 0.959 0.966 0.982 0.893 0.849 0.916 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
81. C27B7.1 spr-2 14958 7.478 0.965 0.965 0.960 0.965 0.977 0.905 0.852 0.889 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
82. C53A5.3 hda-1 18413 7.477 0.969 0.967 0.941 0.967 0.959 0.921 0.822 0.931 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
83. F59G1.3 vps-35 9577 7.477 0.953 0.970 0.955 0.970 0.973 0.933 0.811 0.912 Vacuolar protein sorting-associated protein 35 [Source:RefSeq peptide;Acc:NP_495180]
84. F09G2.9 attf-2 14771 7.476 0.971 0.972 0.958 0.972 0.921 0.929 0.878 0.875 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
85. F59G1.5 ptp-2 7879 7.476 0.947 0.970 0.953 0.970 0.955 0.940 0.835 0.906 Tyrosine-protein phosphatase non-receptor type [Source:RefSeq peptide;Acc:NP_001293512]
86. F43G6.9 patr-1 23000 7.475 0.928 0.981 0.955 0.981 0.948 0.943 0.819 0.920 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
87. F32H2.1 snpc-4 7581 7.475 0.960 0.953 0.939 0.953 0.962 0.885 0.895 0.928 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
88. T09B4.10 chn-1 5327 7.474 0.964 0.946 0.959 0.946 0.970 0.902 0.858 0.929 C-term of Hsp70-iNteracting protein (CHIP family) [Source:RefSeq peptide;Acc:NP_491781]
89. C18D11.4 rsp-8 18308 7.473 0.962 0.960 0.932 0.960 0.965 0.871 0.912 0.911 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
90. Y40B1B.5 eif-3.J 15061 7.472 0.969 0.927 0.941 0.927 0.977 0.925 0.933 0.873 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
91. Y56A3A.20 ccf-1 18463 7.472 0.972 0.945 0.939 0.945 0.959 0.907 0.895 0.910 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
92. B0035.6 B0035.6 7327 7.471 0.987 0.956 0.938 0.956 0.978 0.884 0.868 0.904
93. T10C6.4 srx-44 8454 7.471 0.986 0.967 0.953 0.967 0.963 0.900 0.854 0.881 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
94. D2007.4 mrpl-18 2880 7.47 0.969 0.947 0.935 0.947 0.964 0.909 0.895 0.904 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
95. R11A5.2 nud-2 15326 7.469 0.976 0.950 0.961 0.950 0.922 0.922 0.861 0.927 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_492172]
96. F59E12.11 sam-4 8179 7.469 0.970 0.969 0.945 0.969 0.953 0.903 0.848 0.912
97. F57B9.7 flap-1 5377 7.468 0.953 0.960 0.929 0.960 0.961 0.944 0.836 0.925 FLi1-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_741207]
98. F33D11.11 vpr-1 18001 7.468 0.950 0.952 0.936 0.952 0.952 0.900 0.904 0.922 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
99. Y47D3A.27 teg-1 5171 7.466 0.958 0.937 0.936 0.937 0.970 0.935 0.864 0.929 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_499455]
100. T18H9.6 mdt-27 5418 7.466 0.961 0.946 0.949 0.946 0.953 0.949 0.877 0.885 MeDiaTor [Source:RefSeq peptide;Acc:NP_505386]

There are 2803 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA