C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for T05F1.1

Gene ID Gene Name Reads Transcripts Annotation
T05F1.1 nra-2 7101 T05F1.1a, T05F1.1b Nicalin [Source:RefSeq peptide;Acc:NP_492553]

Genes with expression patterns similar to T05F1.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T05F1.1 nra-2 7101 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nicalin [Source:RefSeq peptide;Acc:NP_492553]
2. B0464.7 baf-1 10161 7.696 0.956 0.963 0.965 0.963 0.959 0.976 0.963 0.951 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
3. K08E7.1 eak-7 18960 7.671 0.981 0.959 0.930 0.959 0.961 0.972 0.944 0.965 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
4. F43G9.9 cpn-1 14505 7.662 0.973 0.952 0.962 0.952 0.976 0.935 0.962 0.950 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
5. F28H1.3 aars-2 13537 7.642 0.950 0.943 0.950 0.943 0.964 0.972 0.969 0.951 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
6. R12C12.2 ran-5 14517 7.641 0.971 0.951 0.942 0.951 0.974 0.947 0.941 0.964 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
7. C15H11.4 dhs-22 21674 7.637 0.980 0.958 0.957 0.958 0.945 0.928 0.963 0.948 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
8. F59E12.11 sam-4 8179 7.633 0.954 0.948 0.957 0.948 0.952 0.967 0.957 0.950
9. ZK616.6 perm-3 16186 7.628 0.969 0.962 0.965 0.962 0.962 0.929 0.953 0.926 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
10. R05D11.3 ran-4 15494 7.627 0.967 0.976 0.942 0.976 0.941 0.955 0.935 0.935 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
11. T23H2.1 npp-12 12425 7.623 0.936 0.951 0.939 0.951 0.960 0.941 0.965 0.980 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
12. ZK1058.4 ccdc-47 8879 7.619 0.963 0.964 0.924 0.964 0.934 0.964 0.957 0.949 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
13. F54C8.5 rheb-1 6358 7.618 0.982 0.964 0.935 0.964 0.920 0.950 0.949 0.954 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
14. ZK863.6 dpy-30 16177 7.607 0.947 0.955 0.944 0.955 0.949 0.968 0.924 0.965 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
15. B0285.1 cdk-12 5900 7.599 0.970 0.953 0.951 0.953 0.925 0.928 0.959 0.960 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
16. E01A2.2 E01A2.2 12356 7.598 0.956 0.935 0.976 0.935 0.947 0.968 0.935 0.946 Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
17. B0205.11 mrpl-9 9162 7.595 0.903 0.921 0.973 0.921 0.970 0.974 0.970 0.963 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
18. F41H10.4 F41H10.4 3295 7.595 0.967 0.931 0.964 0.931 0.943 0.942 0.950 0.967
19. ZK742.1 xpo-1 20741 7.594 0.951 0.954 0.943 0.954 0.948 0.957 0.969 0.918 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
20. Y54E5A.4 npp-4 6288 7.593 0.958 0.955 0.932 0.955 0.948 0.917 0.969 0.959 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
21. C27B7.1 spr-2 14958 7.593 0.967 0.937 0.946 0.937 0.964 0.935 0.955 0.952 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
22. T10B11.3 ztf-4 5161 7.591 0.935 0.956 0.942 0.956 0.976 0.957 0.908 0.961 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
23. T19C3.8 fem-2 9225 7.588 0.957 0.950 0.946 0.950 0.940 0.953 0.941 0.951 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
24. F13G3.4 dylt-1 21345 7.583 0.928 0.943 0.934 0.943 0.964 0.955 0.974 0.942 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
25. D2013.2 wdfy-2 7286 7.579 0.960 0.943 0.954 0.943 0.967 0.975 0.880 0.957 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
26. K11D12.2 pqn-51 15951 7.574 0.967 0.963 0.929 0.963 0.938 0.926 0.946 0.942 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
27. T10F2.4 prp-19 11298 7.572 0.974 0.957 0.955 0.957 0.932 0.904 0.971 0.922 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
28. T21D12.3 pqbp-1.1 5755 7.571 0.973 0.955 0.964 0.955 0.931 0.896 0.961 0.936 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
29. W01G7.3 rpb-11 7826 7.569 0.965 0.940 0.937 0.940 0.966 0.934 0.966 0.921 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
30. F32H2.4 thoc-3 3861 7.568 0.955 0.963 0.937 0.963 0.925 0.938 0.931 0.956 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
31. H17B01.4 emc-1 9037 7.568 0.958 0.949 0.884 0.949 0.976 0.967 0.927 0.958 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
32. F52C9.7 mog-3 9880 7.563 0.964 0.964 0.934 0.964 0.929 0.898 0.966 0.944 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
33. C52E4.6 cyl-1 6405 7.562 0.947 0.953 0.939 0.953 0.936 0.915 0.964 0.955 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
34. Y111B2A.18 rsp-3 43731 7.562 0.967 0.967 0.945 0.967 0.922 0.906 0.959 0.929 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
35. C25D7.8 otub-1 7941 7.561 0.961 0.933 0.951 0.933 0.953 0.911 0.948 0.971 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
36. ZK742.5 lbp-4 2560 7.561 0.965 0.964 0.928 0.964 0.960 0.953 0.899 0.928 Fatty acid-binding protein homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23092]
37. B0035.3 B0035.3 4118 7.56 0.961 0.933 0.938 0.933 0.960 0.948 0.924 0.963
38. F43G6.9 patr-1 23000 7.559 0.950 0.973 0.928 0.973 0.918 0.950 0.935 0.932 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
39. Y37E3.15 npp-13 7250 7.559 0.925 0.940 0.953 0.940 0.968 0.931 0.963 0.939 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
40. ZK1010.3 frg-1 3533 7.559 0.947 0.956 0.950 0.956 0.959 0.925 0.914 0.952 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
41. Y62E10A.11 mdt-9 5971 7.558 0.930 0.954 0.943 0.954 0.948 0.944 0.959 0.926 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
42. F53F10.5 npp-11 3378 7.558 0.954 0.966 0.903 0.966 0.957 0.911 0.961 0.940 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
43. F22D6.3 nars-1 18624 7.556 0.945 0.944 0.970 0.944 0.944 0.948 0.929 0.932 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
44. K01G5.4 ran-1 32379 7.555 0.956 0.949 0.933 0.949 0.951 0.931 0.953 0.933 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
45. T19B4.2 npp-7 13073 7.553 0.965 0.954 0.933 0.954 0.945 0.919 0.958 0.925 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
46. Y17G7A.1 hmg-12 29989 7.553 0.959 0.942 0.951 0.942 0.965 0.910 0.951 0.933 HMG [Source:RefSeq peptide;Acc:NP_496544]
47. Y38A8.3 ulp-2 7403 7.552 0.944 0.939 0.954 0.939 0.956 0.912 0.950 0.958 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
48. Y46G5A.5 pisy-1 13040 7.544 0.972 0.924 0.882 0.924 0.948 0.963 0.963 0.968 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
49. F44B9.7 mdt-30 3651 7.544 0.938 0.956 0.918 0.956 0.963 0.926 0.927 0.960 Prion-like-(Q/N-rich) domain-bearing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:P34428]
50. T04A8.14 emb-5 11746 7.542 0.954 0.967 0.931 0.967 0.939 0.918 0.931 0.935 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
51. C32D5.5 set-4 7146 7.541 0.983 0.937 0.932 0.937 0.952 0.919 0.952 0.929 Histone-lysine N-methyltransferase Suv4-20 [Source:UniProtKB/Swiss-Prot;Acc:Q09265]
52. W02B12.3 rsp-1 9235 7.541 0.956 0.969 0.947 0.969 0.940 0.914 0.918 0.928 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
53. H21P03.1 mbf-1 25586 7.54 0.917 0.928 0.938 0.928 0.960 0.970 0.950 0.949 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
54. ZK686.4 snu-23 9040 7.539 0.972 0.956 0.925 0.956 0.949 0.925 0.902 0.954 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
55. T16G1.11 eif-3.K 14014 7.538 0.949 0.928 0.931 0.928 0.948 0.959 0.960 0.935 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
56. R07E5.14 rnp-4 11659 7.538 0.969 0.944 0.917 0.944 0.941 0.952 0.920 0.951 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
57. C08B11.5 sap-49 10553 7.531 0.953 0.959 0.921 0.959 0.940 0.926 0.966 0.907 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
58. Y41D4B.13 ced-2 10100 7.528 0.965 0.968 0.939 0.968 0.934 0.921 0.918 0.915 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
59. C05C8.6 hpo-9 8263 7.527 0.953 0.927 0.940 0.927 0.958 0.919 0.962 0.941
60. F33D4.7 emc-6 6534 7.527 0.957 0.935 0.949 0.935 0.893 0.942 0.943 0.973 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
61. F32A5.7 lsm-4 3785 7.523 0.960 0.961 0.924 0.961 0.922 0.932 0.946 0.917 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
62. F38A5.1 odr-8 5283 7.522 0.949 0.939 0.914 0.939 0.955 0.934 0.964 0.928 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
63. F58E10.3 ddx-17 15107 7.522 0.957 0.936 0.958 0.936 0.931 0.915 0.931 0.958 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
64. F33H2.5 pole-1 3734 7.52 0.920 0.972 0.921 0.972 0.936 0.908 0.951 0.940 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
65. C38C10.2 slc-17.2 6819 7.519 0.969 0.947 0.900 0.947 0.956 0.944 0.916 0.940 Uncharacterized transporter slc-17.2 [Source:UniProtKB/Swiss-Prot;Acc:Q03567]
66. R06C1.2 fdps-1 4504 7.518 0.957 0.933 0.887 0.933 0.973 0.935 0.938 0.962 Farnesyl DiPhosphate Synthetase [Source:RefSeq peptide;Acc:NP_493027]
67. ZK550.4 ZK550.4 5815 7.517 0.864 0.969 0.932 0.969 0.964 0.963 0.900 0.956 TFIIE-alpha protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG49]
68. ZK353.1 cyy-1 5745 7.517 0.963 0.961 0.874 0.961 0.960 0.918 0.933 0.947 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
69. W04D2.5 mrps-11 5757 7.514 0.936 0.951 0.952 0.951 0.940 0.923 0.950 0.911 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
70. M01B12.3 arx-7 7584 7.51 0.956 0.923 0.933 0.923 0.964 0.920 0.936 0.955 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
71. F58D5.1 hrp-2 17211 7.508 0.944 0.931 0.938 0.931 0.965 0.918 0.963 0.918 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
72. C02B10.5 C02B10.5 9171 7.507 0.974 0.904 0.924 0.904 0.966 0.928 0.965 0.942
73. ZK1098.5 trpp-3 3389 7.506 0.939 0.924 0.961 0.924 0.925 0.962 0.923 0.948 Probable trafficking protein particle complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34605]
74. D1022.1 ubc-6 9722 7.505 0.969 0.932 0.898 0.932 0.954 0.940 0.959 0.921 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
75. R151.9 pfd-5 6951 7.505 0.937 0.920 0.931 0.920 0.958 0.971 0.942 0.926 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
76. F36A2.1 cids-2 4551 7.505 0.943 0.940 0.951 0.940 0.930 0.918 0.940 0.943 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
77. Y73B6BL.32 lsm-8 11002 7.504 0.929 0.921 0.934 0.921 0.944 0.978 0.949 0.928 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
78. W08E3.3 ola-1 20885 7.504 0.909 0.904 0.925 0.904 0.961 0.967 0.960 0.974 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
79. T17E9.2 nmt-1 8017 7.503 0.932 0.955 0.928 0.955 0.940 0.929 0.962 0.902 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
80. Y116A8C.34 cyn-13 2972 7.503 0.957 0.910 0.914 0.910 0.918 0.951 0.971 0.972 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
81. C25A1.4 C25A1.4 15507 7.502 0.974 0.946 0.929 0.946 0.929 0.896 0.953 0.929
82. T24F1.1 raga-1 16171 7.502 0.958 0.941 0.923 0.941 0.918 0.944 0.935 0.942 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
83. F33D4.5 mrpl-1 5337 7.502 0.895 0.947 0.954 0.947 0.917 0.963 0.956 0.923 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
84. F35G12.3 sel-5 5924 7.501 0.963 0.945 0.943 0.945 0.946 0.947 0.875 0.937 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_001022562]
85. C26E6.7 eri-9 8069 7.5 0.957 0.949 0.923 0.949 0.883 0.919 0.960 0.960 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
86. T10C6.4 srx-44 8454 7.497 0.979 0.969 0.949 0.969 0.903 0.885 0.948 0.895 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
87. F02E9.9 dpt-1 5401 7.496 0.954 0.949 0.905 0.949 0.933 0.925 0.936 0.945 Dipeptidyl Peptidase Three [Source:RefSeq peptide;Acc:NP_001040648]
88. Y116A8C.42 snr-1 17062 7.496 0.917 0.936 0.922 0.936 0.951 0.920 0.943 0.971 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
89. Y54E10A.5 dnc-6 4442 7.496 0.964 0.965 0.932 0.965 0.931 0.909 0.884 0.946 Dynactin subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3F1]
90. T01E8.6 mrps-14 9328 7.495 0.920 0.950 0.936 0.950 0.948 0.916 0.969 0.906 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
91. C18A3.5 tiar-1 25400 7.495 0.949 0.952 0.950 0.952 0.941 0.945 0.913 0.893 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
92. R06A4.9 pfs-2 4733 7.495 0.910 0.949 0.899 0.949 0.955 0.958 0.931 0.944 Polyadenylation Factor Subunit homolog [Source:RefSeq peptide;Acc:NP_001293597]
93. W02F12.6 sna-1 7338 7.493 0.980 0.939 0.933 0.939 0.951 0.865 0.958 0.928 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
94. C37A2.2 pqn-20 10913 7.492 0.978 0.926 0.907 0.926 0.955 0.929 0.935 0.936 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
95. F45F2.11 F45F2.11 6741 7.491 0.918 0.960 0.923 0.960 0.927 0.932 0.908 0.963
96. B0336.7 B0336.7 1448 7.49 0.943 0.933 0.900 0.933 0.935 0.948 0.954 0.944
97. F25B3.6 rtfo-1 11965 7.49 0.917 0.962 0.888 0.962 0.943 0.929 0.927 0.962 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
98. K07D4.3 rpn-11 8834 7.49 0.966 0.963 0.928 0.963 0.941 0.953 0.870 0.906 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
99. R53.2 dtmk-1 6821 7.489 0.936 0.958 0.956 0.958 0.949 0.924 0.908 0.900 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
100. Y32F6A.1 set-22 2474 7.489 0.937 0.938 0.931 0.938 0.962 0.919 0.937 0.927 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_505681]

There are 1984 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA