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Results for Y39A3CR.1

Gene ID Gene Name Reads Transcripts Annotation
Y39A3CR.1 smi-1 1031 Y39A3CR.1a, Y39A3CR.1b SMN (survival of motor neuron) protein Interactor [Source:RefSeq peptide;Acc:NP_001022847]

Genes with expression patterns similar to Y39A3CR.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y39A3CR.1 smi-1 1031 7 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - SMN (survival of motor neuron) protein Interactor [Source:RefSeq peptide;Acc:NP_001022847]
2. F29C4.6 tut-1 5637 6.539 0.951 0.921 0.873 0.921 0.942 0.969 0.962 - Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
3. Y116A8C.42 snr-1 17062 6.523 0.948 0.946 0.890 0.946 0.940 0.954 0.899 - Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
4. Y62E10A.11 mdt-9 5971 6.521 0.931 0.952 0.893 0.952 0.922 0.961 0.910 - MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
5. T01E8.6 mrps-14 9328 6.52 0.934 0.936 0.870 0.936 0.926 0.974 0.944 - Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
6. T23H2.1 npp-12 12425 6.518 0.867 0.955 0.895 0.955 0.937 0.974 0.935 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
7. W06H3.3 ctps-1 8363 6.516 0.942 0.941 0.863 0.941 0.928 0.981 0.920 - CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
8. F56D12.5 vig-1 42594 6.514 0.957 0.919 0.894 0.919 0.941 0.944 0.940 - VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
9. Y54E5A.6 Y54E5A.6 770 6.509 0.935 0.933 0.908 0.933 0.932 0.978 0.890 -
10. C26E6.4 rpb-2 7053 6.507 0.855 0.936 0.908 0.936 0.941 0.967 0.964 - DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
11. F23F1.1 nfyc-1 9983 6.505 0.857 0.947 0.903 0.947 0.956 0.956 0.939 - Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
12. PAR2.1 mtss-1 4055 6.505 0.935 0.930 0.864 0.930 0.919 0.981 0.946 - Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
13. Y37D8A.11 cec-7 8801 6.502 0.925 0.947 0.885 0.947 0.935 0.962 0.901 - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
14. R13F6.10 cra-1 11610 6.501 0.904 0.958 0.870 0.958 0.938 0.940 0.933 - N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
15. R13A5.12 lpd-7 10476 6.501 0.932 0.920 0.888 0.920 0.928 0.991 0.922 - Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
16. T28D9.2 rsp-5 6460 6.486 0.901 0.927 0.846 0.927 0.962 0.986 0.937 - Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
17. C06A1.5 rpb-6 7515 6.484 0.912 0.918 0.894 0.918 0.951 0.963 0.928 - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
18. W06E11.4 sbds-1 6701 6.48 0.902 0.945 0.880 0.945 0.935 0.982 0.891 - Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
19. C34E10.5 prmt-5 12277 6.474 0.890 0.923 0.879 0.923 0.930 0.964 0.965 - Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
20. Y18D10A.16 Y18D10A.16 2881 6.471 0.916 0.924 0.829 0.924 0.961 0.980 0.937 -
21. Y37E3.3 rpb-10 4051 6.47 0.908 0.952 0.883 0.952 0.936 0.957 0.882 - DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
22. Y53C12B.3 nos-3 20231 6.464 0.921 0.940 0.854 0.940 0.944 0.960 0.905 - NanOS related [Source:RefSeq peptide;Acc:NP_496101]
23. C36B1.5 prp-4 2714 6.463 0.861 0.908 0.889 0.908 0.932 0.988 0.977 - yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
24. C34E10.11 mrps-26 4649 6.462 0.915 0.942 0.845 0.942 0.959 0.954 0.905 - Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
25. C34E10.2 gop-2 5684 6.462 0.915 0.947 0.867 0.947 0.928 0.986 0.872 - GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
26. F32H2.1 snpc-4 7581 6.462 0.889 0.947 0.858 0.947 0.940 0.964 0.917 - snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
27. T03D8.2 mrps-12 8253 6.461 0.945 0.923 0.873 0.923 0.949 0.955 0.893 - Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
28. W02B12.3 rsp-1 9235 6.46 0.896 0.945 0.877 0.945 0.894 0.954 0.949 - Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
29. F58B3.5 mars-1 6729 6.456 0.927 0.946 0.846 0.946 0.937 0.963 0.891 - Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
30. F55H2.6 clu-1 21404 6.454 0.938 0.923 0.832 0.923 0.939 0.968 0.931 - Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
31. C08F8.1 pfd-1 10199 6.451 0.905 0.915 0.916 0.915 0.932 0.953 0.915 - Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
32. Y37E3.15 npp-13 7250 6.451 0.858 0.938 0.902 0.938 0.917 0.935 0.963 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
33. C56C10.8 icd-1 89788 6.449 0.904 0.953 0.894 0.953 0.934 0.903 0.908 - Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
34. K09H9.6 lpd-6 5459 6.449 0.900 0.915 0.882 0.915 0.943 0.980 0.914 - LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
35. T28D9.10 snr-3 9995 6.448 0.922 0.928 0.896 0.928 0.922 0.989 0.863 - Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
36. C49H3.10 xpo-3 9101 6.445 0.928 0.941 0.894 0.941 0.924 0.973 0.844 - eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
37. ZK381.1 him-3 4913 6.445 0.903 0.915 0.838 0.915 0.950 0.975 0.949 - High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
38. Y38A8.3 ulp-2 7403 6.445 0.860 0.927 0.879 0.927 0.925 0.970 0.957 - Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
39. K01G5.1 rnf-113 4336 6.443 0.877 0.928 0.876 0.928 0.965 0.974 0.895 - RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
40. B0511.8 mrps-30 5050 6.443 0.919 0.911 0.891 0.911 0.908 0.962 0.941 - Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
41. T21C9.12 scpl-4 14723 6.441 0.909 0.924 0.874 0.924 0.891 0.958 0.961 - Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
42. F22D6.3 nars-1 18624 6.441 0.906 0.937 0.879 0.937 0.911 0.954 0.917 - Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
43. C53D5.6 imb-3 28921 6.438 0.926 0.959 0.884 0.959 0.900 0.868 0.942 - IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
44. C25A1.4 C25A1.4 15507 6.438 0.862 0.951 0.837 0.951 0.937 0.968 0.932 -
45. T06A10.4 lsy-13 7631 6.436 0.927 0.929 0.878 0.929 0.919 0.959 0.895 -
46. T06G6.9 pfd-3 10945 6.436 0.963 0.947 0.935 0.947 0.904 0.874 0.866 - Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:O18054]
47. C47B2.9 C47B2.9 4096 6.435 0.934 0.953 0.868 0.953 0.934 0.964 0.829 -
48. C26D10.1 ran-3 11111 6.433 0.876 0.940 0.874 0.940 0.936 0.977 0.890 - Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
49. Y71G12B.9 lin-65 7476 6.432 0.830 0.936 0.894 0.936 0.951 0.972 0.913 - LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
50. Y41D4B.19 npp-8 12992 6.43 0.818 0.952 0.875 0.952 0.954 0.984 0.895 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
51. Y54H5A.2 Y54H5A.2 2168 6.429 0.924 0.925 0.891 0.925 0.933 0.988 0.843 -
52. F56D2.6 ddx-15 12282 6.428 0.858 0.929 0.869 0.929 0.937 0.952 0.954 - Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
53. F29F11.3 tut-2 1914 6.427 0.912 0.942 0.872 0.942 0.954 0.970 0.835 - Cytoplasmic tRNA 2-thiolation protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19906]
54. C15H11.9 rrbs-1 9177 6.426 0.916 0.908 0.870 0.908 0.932 0.991 0.901 - Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
55. T24H7.1 phb-2 28775 6.426 0.936 0.922 0.839 0.922 0.920 0.967 0.920 - Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
56. F32A5.7 lsm-4 3785 6.426 0.868 0.909 0.904 0.909 0.948 0.967 0.921 - Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
57. F26F4.11 rpb-8 7601 6.425 0.892 0.936 0.893 0.936 0.916 0.982 0.870 - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
58. Y47D3A.26 smc-3 6256 6.425 0.852 0.934 0.872 0.934 0.938 0.977 0.918 - Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
59. K01G5.4 ran-1 32379 6.424 0.847 0.953 0.908 0.953 0.902 0.953 0.908 - GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
60. R09B3.5 mag-1 7496 6.424 0.874 0.943 0.881 0.943 0.958 0.952 0.873 - Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
61. F22B5.9 fars-3 7209 6.423 0.942 0.900 0.857 0.900 0.908 0.976 0.940 - Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
62. Y105E8B.3 riok-2 5531 6.422 0.879 0.905 0.873 0.905 0.937 0.971 0.952 - Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
63. C34D4.12 cyn-12 7363 6.422 0.894 0.932 0.898 0.932 0.922 0.981 0.863 - CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
64. ZK652.1 snr-5 5993 6.421 0.944 0.912 0.902 0.912 0.934 0.970 0.847 - Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
65. T10F2.4 prp-19 11298 6.421 0.892 0.952 0.889 0.952 0.924 0.872 0.940 - Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
66. F18A1.8 pid-1 3751 6.421 0.916 0.898 0.859 0.898 0.938 0.979 0.933 - 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
67. F52C9.7 mog-3 9880 6.42 0.834 0.925 0.871 0.925 0.944 0.955 0.966 - Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
68. Y56A3A.19 Y56A3A.19 9680 6.42 0.927 0.929 0.820 0.929 0.924 0.980 0.911 - Acyl carrier protein [Source:RefSeq peptide;Acc:NP_499549]
69. C14A4.14 mrps-22 7966 6.417 0.939 0.919 0.853 0.919 0.894 0.991 0.902 - Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
70. Y23H5B.6 Y23H5B.6 5886 6.417 0.913 0.914 0.877 0.914 0.934 0.962 0.903 -
71. F33D4.5 mrpl-1 5337 6.417 0.899 0.919 0.828 0.919 0.941 0.947 0.964 - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
72. K01C8.9 nst-1 4587 6.416 0.809 0.940 0.854 0.940 0.948 0.960 0.965 - Guanine nucleotide-binding protein-like 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21086]
73. F59A2.1 npp-9 34375 6.415 0.882 0.916 0.911 0.916 0.921 0.991 0.878 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
74. H27M09.2 rpb-5 4744 6.415 0.926 0.890 0.875 0.890 0.944 0.990 0.900 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
75. T02G5.9 kars-1 9763 6.415 0.906 0.913 0.877 0.913 0.943 0.961 0.902 - Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
76. T21G5.3 glh-1 16470 6.414 0.898 0.898 0.909 0.898 0.931 0.926 0.954 - ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
77. Y40B1B.8 Y40B1B.8 4877 6.413 0.914 0.896 0.901 0.896 0.919 0.976 0.911 -
78. F58D5.1 hrp-2 17211 6.411 0.908 0.953 0.828 0.953 0.895 0.937 0.937 - human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
79. D2023.5 mpst-1 10328 6.411 0.912 0.920 0.901 0.920 0.932 0.973 0.853 - Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
80. Y54E10A.11 Y54E10A.11 2415 6.411 0.958 0.898 0.886 0.898 0.913 0.978 0.880 - E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
81. T21B10.7 cct-2 13999 6.411 0.912 0.947 0.866 0.947 0.912 0.976 0.851 - T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
82. ZK328.2 eftu-2 7040 6.41 0.857 0.952 0.872 0.952 0.913 0.923 0.941 - Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
83. W10C6.1 mat-2 2312 6.41 0.864 0.953 0.834 0.953 0.934 0.927 0.945 - Metaphase-to-Anaphase Transition defect [Source:RefSeq peptide;Acc:NP_496383]
84. T25G3.4 T25G3.4 9394 6.408 0.919 0.932 0.850 0.932 0.942 0.969 0.864 - Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
85. W08E3.1 snr-2 14849 6.408 0.900 0.949 0.882 0.949 0.898 0.965 0.865 - Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
86. K08F11.3 cif-1 10218 6.408 0.932 0.903 0.882 0.903 0.909 0.929 0.950 - COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
87. C06E7.1 sams-3 26921 6.408 0.925 0.953 0.875 0.953 0.883 0.881 0.938 - Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
88. T07D4.4 ddx-19 7234 6.407 0.930 0.897 0.870 0.897 0.932 0.984 0.897 - DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
89. Y37D8A.18 mrps-10 4551 6.405 0.935 0.911 0.850 0.911 0.922 0.977 0.899 - Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
90. K04C2.3 K04C2.3 23540 6.404 0.891 0.903 0.874 0.903 0.951 0.981 0.901 -
91. C01F6.8 icln-1 6586 6.403 0.859 0.943 0.881 0.943 0.935 0.978 0.864 - ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
92. T19B4.2 npp-7 13073 6.402 0.903 0.915 0.861 0.915 0.938 0.955 0.915 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
93. T21B10.1 mrpl-50 14595 6.402 0.905 0.940 0.880 0.940 0.878 0.971 0.888 - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
94. F28C6.6 suf-1 3642 6.401 0.827 0.918 0.875 0.918 0.953 0.953 0.957 - SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
95. F48C1.6 F48C1.6 4064 6.401 0.879 0.942 0.839 0.942 0.895 0.979 0.925 -
96. F59C6.4 exos-3 2626 6.399 0.853 0.916 0.895 0.916 0.944 0.956 0.919 - EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_492751]
97. Y39B6A.35 tgt-2 2364 6.399 0.920 0.943 0.862 0.943 0.908 0.978 0.845 - Queuine tRNA-ribosyltransferase subunit tgt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEU3]
98. C27B7.5 C27B7.5 6331 6.398 0.868 0.930 0.871 0.930 0.953 0.938 0.908 -
99. Y41D4B.12 set-23 2590 6.397 0.916 0.895 0.855 0.895 0.953 0.976 0.907 - Probable histone-lysine N-methyltransferase set-23 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y12]
100. Y116A8C.34 cyn-13 2972 6.397 0.906 0.913 0.892 0.913 0.857 0.973 0.943 - CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA