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Results for F29F11.3

Gene ID Gene Name Reads Transcripts Annotation
F29F11.3 tut-2 1914 F29F11.3 Cytoplasmic tRNA 2-thiolation protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19906]

Genes with expression patterns similar to F29F11.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F29F11.3 tut-2 1914 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Cytoplasmic tRNA 2-thiolation protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19906]
2. T23H2.1 npp-12 12425 7.583 0.957 0.956 0.955 0.956 0.961 0.966 0.903 0.929 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
3. Y116A8C.42 snr-1 17062 7.583 0.952 0.934 0.956 0.934 0.952 0.944 0.963 0.948 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
4. Y62E10A.11 mdt-9 5971 7.569 0.965 0.960 0.964 0.960 0.929 0.964 0.941 0.886 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
5. F59A2.1 npp-9 34375 7.56 0.942 0.923 0.957 0.923 0.933 0.981 0.962 0.939 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
6. R12C12.2 ran-5 14517 7.554 0.930 0.940 0.979 0.940 0.933 0.957 0.914 0.961 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
7. Y106G6H.15 ska-1 2362 7.552 0.917 0.951 0.929 0.951 0.932 0.981 0.944 0.947 Spindle and kinetochore-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWS0]
8. Y54E5A.4 npp-4 6288 7.552 0.938 0.960 0.962 0.960 0.946 0.927 0.930 0.929 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
9. Y18D10A.16 Y18D10A.16 2881 7.543 0.961 0.916 0.951 0.916 0.966 0.956 0.933 0.944
10. Y73B6BL.32 lsm-8 11002 7.541 0.945 0.933 0.967 0.933 0.936 0.969 0.971 0.887 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
11. C09G9.2 npp-23 2886 7.537 0.923 0.947 0.944 0.947 0.943 0.960 0.982 0.891 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_501537]
12. B0205.11 mrpl-9 9162 7.537 0.934 0.944 0.958 0.944 0.934 0.968 0.950 0.905 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
13. T25G3.4 T25G3.4 9394 7.536 0.956 0.945 0.951 0.945 0.949 0.962 0.929 0.899 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
14. Y37D8A.11 cec-7 8801 7.532 0.960 0.953 0.953 0.953 0.946 0.919 0.933 0.915 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
15. F28H1.3 aars-2 13537 7.529 0.920 0.944 0.946 0.944 0.957 0.950 0.924 0.944 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
16. T19C3.8 fem-2 9225 7.527 0.890 0.947 0.967 0.947 0.934 0.979 0.958 0.905 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
17. Y39G10AR.7 ekl-7 7072 7.526 0.958 0.933 0.960 0.933 0.940 0.948 0.910 0.944
18. F58E10.3 ddx-17 15107 7.523 0.930 0.930 0.962 0.930 0.951 0.948 0.940 0.932 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
19. T12E12.2 cec-6 4758 7.517 0.930 0.922 0.970 0.922 0.924 0.935 0.946 0.968 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
20. C34E10.2 gop-2 5684 7.517 0.943 0.946 0.957 0.946 0.948 0.954 0.964 0.859 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
21. T28D9.10 snr-3 9995 7.515 0.937 0.927 0.919 0.927 0.939 0.966 0.975 0.925 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
22. R07E5.14 rnp-4 11659 7.514 0.929 0.929 0.954 0.929 0.926 0.969 0.959 0.919 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
23. H27M09.2 rpb-5 4744 7.513 0.948 0.910 0.927 0.910 0.952 0.989 0.940 0.937 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
24. Y38A8.3 ulp-2 7403 7.512 0.944 0.955 0.969 0.955 0.933 0.956 0.868 0.932 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
25. Y23H5B.6 Y23H5B.6 5886 7.51 0.965 0.936 0.935 0.936 0.955 0.934 0.932 0.917
26. ZK1010.3 frg-1 3533 7.51 0.923 0.931 0.966 0.931 0.922 0.968 0.925 0.944 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
27. H20J04.8 mog-2 3084 7.508 0.939 0.928 0.967 0.928 0.917 0.963 0.967 0.899 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
28. Y37E3.3 rpb-10 4051 7.507 0.952 0.926 0.911 0.926 0.951 0.963 0.951 0.927 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
29. C36B1.5 prp-4 2714 7.505 0.927 0.943 0.974 0.943 0.947 0.959 0.899 0.913 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
30. C30C11.1 mrpl-32 5238 7.504 0.906 0.948 0.948 0.948 0.952 0.972 0.915 0.915 Probable 39S ribosomal protein L32, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q04907]
31. Y17G7A.1 hmg-12 29989 7.498 0.951 0.938 0.962 0.938 0.950 0.934 0.868 0.957 HMG [Source:RefSeq peptide;Acc:NP_496544]
32. ZK742.1 xpo-1 20741 7.497 0.890 0.956 0.973 0.956 0.936 0.942 0.933 0.911 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
33. F23F1.1 nfyc-1 9983 7.495 0.944 0.950 0.973 0.950 0.932 0.932 0.865 0.949 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
34. Y37D8A.9 mrg-1 14369 7.494 0.919 0.938 0.947 0.938 0.934 0.965 0.943 0.910 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
35. Y71G12B.9 lin-65 7476 7.493 0.917 0.948 0.943 0.948 0.936 0.959 0.916 0.926 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
36. F59E12.11 sam-4 8179 7.492 0.921 0.946 0.960 0.946 0.908 0.953 0.935 0.923
37. F53F10.5 npp-11 3378 7.487 0.908 0.954 0.943 0.954 0.919 0.970 0.937 0.902 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
38. B0205.9 B0205.9 3651 7.486 0.923 0.942 0.969 0.942 0.892 0.965 0.937 0.916
39. F43G9.5 cfim-1 9169 7.486 0.932 0.942 0.971 0.942 0.895 0.970 0.945 0.889 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
40. T10B11.3 ztf-4 5161 7.485 0.904 0.964 0.972 0.964 0.914 0.962 0.902 0.903 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
41. K08F4.2 gtbp-1 25222 7.481 0.936 0.932 0.927 0.932 0.939 0.936 0.956 0.923 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
42. F29C4.6 tut-1 5637 7.48 0.936 0.949 0.956 0.949 0.954 0.971 0.849 0.916 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
43. Y53C12B.3 nos-3 20231 7.48 0.931 0.939 0.970 0.939 0.937 0.916 0.931 0.917 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
44. T22C1.3 T22C1.3 2305 7.478 0.922 0.964 0.977 0.964 0.903 0.949 0.884 0.915
45. Y37E3.15 npp-13 7250 7.478 0.929 0.938 0.957 0.938 0.938 0.932 0.923 0.923 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
46. F15D4.1 btf-1 2519 7.477 0.924 0.954 0.951 0.954 0.956 0.923 0.968 0.847 BTAF (TBP-associated factor) homolog [Source:RefSeq peptide;Acc:NP_496802]
47. C26E6.4 rpb-2 7053 7.476 0.924 0.946 0.964 0.946 0.967 0.948 0.884 0.897 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
48. Y37H2A.5 fbxa-210 2230 7.476 0.930 0.916 0.955 0.916 0.941 0.928 0.937 0.953 F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
49. C06A8.4 skr-17 2589 7.475 0.930 0.937 0.950 0.937 0.899 0.966 0.933 0.923 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_495638]
50. T06A10.4 lsy-13 7631 7.475 0.934 0.940 0.956 0.940 0.924 0.957 0.906 0.918
51. F26F4.11 rpb-8 7601 7.475 0.908 0.950 0.934 0.950 0.923 0.976 0.946 0.888 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
52. ZK863.6 dpy-30 16177 7.475 0.899 0.944 0.968 0.944 0.925 0.927 0.954 0.914 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
53. Y50D7A.9 taco-1 5949 7.474 0.928 0.925 0.925 0.925 0.932 0.974 0.941 0.924 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
54. F52F12.4 lsl-1 4055 7.474 0.899 0.933 0.948 0.933 0.934 0.973 0.983 0.871 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
55. Y73B6BL.33 hrpf-2 4443 7.474 0.896 0.928 0.955 0.928 0.926 0.959 0.946 0.936 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
56. T28D9.2 rsp-5 6460 7.474 0.943 0.910 0.930 0.910 0.951 0.959 0.917 0.954 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
57. Y41D4B.19 npp-8 12992 7.474 0.913 0.933 0.967 0.933 0.917 0.981 0.944 0.886 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
58. R53.2 dtmk-1 6821 7.472 0.903 0.948 0.965 0.948 0.946 0.986 0.850 0.926 Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
59. F41G3.14 exos-8 2300 7.471 0.954 0.924 0.918 0.924 0.954 0.965 0.944 0.888 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
60. Y14H12B.2 Y14H12B.2 6496 7.469 0.926 0.924 0.961 0.924 0.928 0.965 0.957 0.884
61. E02H1.3 tag-124 2189 7.469 0.940 0.967 0.955 0.967 0.906 0.905 0.910 0.919 Probable tRNA pseudouridine synthase tag-124 [Source:UniProtKB/Swiss-Prot;Acc:Q09524]
62. Y92H12BR.6 set-29 2455 7.469 0.924 0.943 0.929 0.943 0.958 0.974 0.902 0.896 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_490849]
63. D2030.4 D2030.4 13261 7.468 0.933 0.912 0.973 0.912 0.923 0.955 0.923 0.937 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:P90789]
64. T01E8.6 mrps-14 9328 7.467 0.943 0.936 0.940 0.936 0.920 0.958 0.927 0.907 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
65. C26D10.1 ran-3 11111 7.467 0.912 0.937 0.953 0.937 0.953 0.961 0.943 0.871 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
66. C25A1.4 C25A1.4 15507 7.466 0.914 0.933 0.953 0.933 0.925 0.968 0.959 0.881
67. F09G2.9 attf-2 14771 7.466 0.951 0.961 0.949 0.961 0.931 0.952 0.906 0.855 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
68. B0511.8 mrps-30 5050 7.463 0.935 0.943 0.963 0.943 0.940 0.945 0.925 0.869 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
69. F48C1.6 F48C1.6 4064 7.463 0.931 0.959 0.912 0.959 0.938 0.970 0.907 0.887
70. C01F6.8 icln-1 6586 7.462 0.927 0.938 0.951 0.938 0.943 0.972 0.960 0.833 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
71. C47B2.9 C47B2.9 4096 7.461 0.942 0.922 0.924 0.922 0.937 0.969 0.973 0.872
72. T12G3.5 mrpl-51 5192 7.46 0.923 0.946 0.928 0.946 0.891 0.970 0.966 0.890 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
73. K07A1.11 rba-1 3421 7.459 0.937 0.939 0.963 0.939 0.905 0.952 0.957 0.867 Probable histone-binding protein rba-1 [Source:UniProtKB/Swiss-Prot;Acc:P90917]
74. C34D4.12 cyn-12 7363 7.459 0.964 0.945 0.964 0.945 0.931 0.944 0.930 0.836 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
75. F56B3.8 mrpl-2 3195 7.456 0.910 0.914 0.943 0.914 0.942 0.967 0.952 0.914 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
76. F53A2.4 nud-1 7818 7.456 0.938 0.919 0.946 0.919 0.935 0.962 0.971 0.866 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
77. Y54H5A.2 Y54H5A.2 2168 7.454 0.936 0.927 0.961 0.927 0.932 0.962 0.950 0.859
78. T24H7.1 phb-2 28775 7.454 0.931 0.944 0.861 0.944 0.941 0.974 0.943 0.916 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
79. Y87G2A.6 cyn-15 2566 7.454 0.877 0.935 0.928 0.935 0.953 0.965 0.947 0.914 CYclophyliN [Source:RefSeq peptide;Acc:NP_493378]
80. C35D10.9 ced-4 3446 7.453 0.932 0.951 0.939 0.951 0.894 0.962 0.918 0.906 Cell death protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P30429]
81. C16A11.3 C16A11.3 3250 7.448 0.964 0.933 0.958 0.933 0.902 0.969 0.905 0.884
82. Y55F3AM.12 dcap-1 8679 7.447 0.947 0.943 0.964 0.943 0.934 0.956 0.916 0.844 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
83. C18E3.8 hop-1 1881 7.447 0.893 0.954 0.965 0.954 0.911 0.963 0.943 0.864 Presenilin hop-1 [Source:UniProtKB/Swiss-Prot;Acc:O02100]
84. F41H10.4 F41H10.4 3295 7.447 0.906 0.910 0.979 0.910 0.918 0.952 0.930 0.942
85. T19B4.2 npp-7 13073 7.446 0.955 0.924 0.953 0.924 0.936 0.955 0.914 0.885 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
86. F33D4.5 mrpl-1 5337 7.444 0.941 0.946 0.935 0.946 0.925 0.964 0.864 0.923 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
87. K08E7.1 eak-7 18960 7.444 0.909 0.943 0.936 0.943 0.934 0.950 0.938 0.891 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
88. F56D2.6 ddx-15 12282 7.443 0.934 0.955 0.958 0.955 0.958 0.930 0.834 0.919 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
89. M18.5 ddb-1 3823 7.441 0.909 0.939 0.930 0.939 0.931 0.974 0.909 0.910 DNA damage-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21554]
90. C48D1.2 ced-3 4123 7.441 0.912 0.913 0.946 0.913 0.918 0.967 0.943 0.929 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
91. T20B12.1 trd-1 2860 7.44 0.954 0.938 0.908 0.938 0.954 0.937 0.907 0.904 Tetratricopeptide repeat-containing protein trd-1 [Source:UniProtKB/Swiss-Prot;Acc:P41842]
92. F32H2.1 snpc-4 7581 7.44 0.947 0.941 0.919 0.941 0.968 0.941 0.905 0.878 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
93. F26B1.3 ima-2 18826 7.439 0.915 0.931 0.952 0.931 0.960 0.933 0.930 0.887 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
94. C33H5.15 sgo-1 3674 7.438 0.890 0.919 0.927 0.919 0.963 0.966 0.900 0.954 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
95. F55H2.6 clu-1 21404 7.438 0.926 0.915 0.906 0.915 0.954 0.948 0.932 0.942 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
96. Y116A8C.34 cyn-13 2972 7.438 0.937 0.933 0.919 0.933 0.870 0.991 0.942 0.913 CYclophyliN [Source:RefSeq peptide;Acc:NP_001255926]
97. ZK1098.5 trpp-3 3389 7.436 0.912 0.928 0.947 0.928 0.943 0.984 0.932 0.862 Probable trafficking protein particle complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34605]
98. B0303.15 mrpl-11 9889 7.433 0.906 0.935 0.954 0.935 0.925 0.957 0.959 0.862 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
99. K02F3.11 rnp-5 6205 7.433 0.906 0.955 0.948 0.955 0.896 0.954 0.883 0.936 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
100. R151.9 pfd-5 6951 7.432 0.957 0.919 0.952 0.919 0.939 0.943 0.938 0.865 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA