C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y108F1.1

Gene ID Gene Name Reads Transcripts Annotation
Y108F1.1 Y108F1.1 0 Y108F1.1

Genes with expression patterns similar to Y108F1.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y108F1.1 Y108F1.1 0 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000
2. C07A9.5 C07A9.5 0 5.732 0.948 - 0.932 - 0.967 0.973 0.957 0.955 Uncharacterized calcium-binding protein C07A9.5 [Source:UniProtKB/Swiss-Prot;Acc:P34316]
3. Y71F9B.16 dnj-30 4262 5.721 0.952 - 0.942 - 0.960 0.981 0.954 0.932 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
4. K09H11.1 K09H11.1 1832 5.714 0.940 - 0.926 - 0.974 0.958 0.947 0.969
5. F18E2.3 scc-3 13464 5.712 0.931 - 0.953 - 0.947 0.972 0.945 0.964 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
6. K08D10.12 tsen-34 2644 5.709 0.950 - 0.937 - 0.960 0.971 0.943 0.948 Trna (tRNA) Splicing ENdonuclease subunit related [Source:RefSeq peptide;Acc:NP_741368]
7. C30B5.6 C30B5.6 0 5.707 0.902 - 0.973 - 0.973 0.955 0.951 0.953
8. Y56A3A.17 npp-16 5391 5.705 0.931 - 0.965 - 0.966 0.934 0.937 0.972 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
9. Y39G10AL.3 cdk-7 3495 5.704 0.933 - 0.962 - 0.970 0.961 0.940 0.938 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
10. F01G4.3 skih-2 3353 5.703 0.892 - 0.953 - 0.956 0.971 0.956 0.975 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
11. F48E8.6 disl-2 8774 5.701 0.927 - 0.936 - 0.966 0.982 0.941 0.949 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
12. C24G6.1 syp-2 2843 5.7 0.919 - 0.954 - 0.970 0.959 0.957 0.941
13. Y73F8A.34 tag-349 7966 5.697 0.911 - 0.951 - 0.943 0.978 0.965 0.949
14. ZK1127.4 ZK1127.4 3088 5.696 0.910 - 0.983 - 0.949 0.948 0.951 0.955 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
15. D1054.14 prp-38 6504 5.696 0.958 - 0.933 - 0.947 0.974 0.931 0.953 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
16. K01C8.10 cct-4 15077 5.694 0.954 - 0.950 - 0.974 0.950 0.946 0.920 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
17. Y61A9LA.8 sut-2 11388 5.693 0.935 - 0.937 - 0.961 0.966 0.960 0.934 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
18. C08B11.6 arp-6 4646 5.693 0.952 - 0.911 - 0.953 0.961 0.954 0.962 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
19. W05F2.7 W05F2.7 1179 5.692 0.948 - 0.948 - 0.964 0.972 0.939 0.921
20. C53D5.6 imb-3 28921 5.691 0.952 - 0.940 - 0.957 0.966 0.948 0.928 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
21. Y105E8A.17 ekl-4 4732 5.69 0.931 - 0.960 - 0.974 0.968 0.952 0.905
22. F59B2.7 rab-6.1 10749 5.69 0.944 - 0.956 - 0.919 0.963 0.934 0.974 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
23. F42G9.4 F42G9.4 520 5.689 0.938 - 0.966 - 0.961 0.975 0.934 0.915
24. F56D1.7 daz-1 23684 5.687 0.958 - 0.972 - 0.938 0.961 0.917 0.941 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
25. D2030.6 prg-1 26751 5.684 0.916 - 0.969 - 0.945 0.951 0.940 0.963 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
26. F32E10.6 cec-5 10643 5.683 0.927 - 0.968 - 0.929 0.944 0.963 0.952 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
27. Y46G5A.4 snrp-200 13827 5.679 0.919 - 0.967 - 0.954 0.933 0.952 0.954 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
28. Y74C9A.4 rcor-1 4686 5.679 0.917 - 0.957 - 0.966 0.959 0.914 0.966 RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207]
29. F26B1.5 F26B1.5 212 5.678 0.948 - 0.971 - 0.934 0.932 0.932 0.961 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_001040654]
30. F46A9.4 skr-2 16831 5.678 0.950 - 0.956 - 0.951 0.976 0.944 0.901 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
31. F11A5.3 F11A5.3 0 5.677 0.923 - 0.951 - 0.978 0.968 0.902 0.955 Rab family member [Source:UniProtKB/TrEMBL;Acc:I7FN82]
32. C15F1.4 ppp-1 1774 5.675 0.960 - 0.892 - 0.959 0.973 0.944 0.947 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
33. C32E8.6 C32E8.6 0 5.675 0.946 - 0.923 - 0.949 0.986 0.950 0.921
34. C50C3.6 prp-8 19582 5.673 0.940 - 0.933 - 0.943 0.957 0.946 0.954 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
35. C36B1.8 gls-1 8617 5.672 0.914 - 0.959 - 0.933 0.956 0.949 0.961 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
36. F25B5.2 nop-1 4127 5.671 0.914 - 0.934 - 0.966 0.959 0.935 0.963 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
37. T12D8.2 drr-2 16208 5.67 0.922 - 0.955 - 0.957 0.971 0.950 0.915 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
38. Y110A7A.13 chp-1 6714 5.67 0.940 - 0.917 - 0.972 0.981 0.931 0.929 CHORD Protein [Source:RefSeq peptide;Acc:NP_491519]
39. F23F1.1 nfyc-1 9983 5.667 0.938 - 0.934 - 0.955 0.948 0.928 0.964 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
40. K04G2.1 iftb-1 12590 5.667 0.928 - 0.938 - 0.964 0.971 0.922 0.944 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
41. ZK1098.8 mut-7 4940 5.667 0.900 - 0.952 - 0.970 0.949 0.913 0.983 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
42. T16G12.7 T16G12.7 764 5.666 0.895 - 0.968 - 0.962 0.959 0.927 0.955 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_499229]
43. T09F3.4 T09F3.4 131 5.666 0.934 - 0.920 - 0.948 0.971 0.958 0.935
44. Y47G6A.20 rnp-6 5542 5.666 0.941 - 0.893 - 0.978 0.984 0.951 0.919 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
45. F09E5.8 F09E5.8 2025 5.666 0.935 - 0.927 - 0.947 0.964 0.928 0.965 Proline synthase co-transcribed bacterial homolog protein [Source:UniProtKB/Swiss-Prot;Acc:P52057]
46. F28B3.7 him-1 18274 5.666 0.911 - 0.934 - 0.964 0.961 0.936 0.960 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
47. C34E10.5 prmt-5 12277 5.664 0.949 - 0.957 - 0.935 0.959 0.927 0.937 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
48. F45H11.3 hpo-35 8299 5.664 0.926 - 0.932 - 0.975 0.973 0.940 0.918
49. F42A10.1 abcf-3 5557 5.664 0.936 - 0.926 - 0.961 0.966 0.940 0.935 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
50. F53F8.6 F53F8.6 0 5.663 0.936 - 0.964 - 0.948 0.975 0.911 0.929
51. Y54G11A.4 Y54G11A.4 0 5.663 0.937 - 0.939 - 0.950 0.965 0.927 0.945
52. F22D6.5 prpf-4 9522 5.663 0.888 - 0.950 - 0.940 0.975 0.940 0.970 vertebrate Pre-mRNA Processing Factor [Source:RefSeq peptide;Acc:NP_001250392]
53. C07H6.9 C07H6.9 351 5.662 0.950 - 0.920 - 0.950 0.956 0.955 0.931
54. Y54E10A.9 vbh-1 28746 5.661 0.957 - 0.926 - 0.920 0.956 0.955 0.947 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
55. C08B11.5 sap-49 10553 5.661 0.924 - 0.955 - 0.950 0.947 0.949 0.936 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
56. F46B6.3 smg-4 4959 5.661 0.930 - 0.933 - 0.949 0.925 0.955 0.969 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
57. W03F11.1 W03F11.1 3234 5.66 0.934 - 0.955 - 0.945 0.975 0.894 0.957
58. F28C1.3 F28C1.3 4448 5.66 0.882 - 0.969 - 0.989 0.958 0.908 0.954 Protein phosphatase 1 regulatory subunit 37 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19857]
59. ZK484.5 ZK484.5 14387 5.66 0.913 - 0.970 - 0.975 0.940 0.915 0.947
60. C28H8.9 dpff-1 8684 5.66 0.958 - 0.959 - 0.944 0.951 0.890 0.958 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
61. F10G8.3 rae-1 7542 5.659 0.955 - 0.942 - 0.958 0.961 0.922 0.921 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
62. C50F4.11 mdf-1 1633 5.658 0.906 - 0.948 - 0.972 0.969 0.914 0.949 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_505462]
63. D1044.1 D1044.1 286 5.658 0.908 - 0.912 - 0.971 0.940 0.962 0.965 Uncharacterized kinase-like protein D1044.1 [Source:UniProtKB/Swiss-Prot;Acc:P41949]
64. Y48G8AL.6 smg-2 12561 5.658 0.930 - 0.930 - 0.952 0.982 0.939 0.925 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
65. C02B10.5 C02B10.5 9171 5.658 0.946 - 0.963 - 0.905 0.951 0.935 0.958
66. F37E3.1 ncbp-1 5649 5.658 0.923 - 0.964 - 0.920 0.964 0.944 0.943 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
67. F37A4.2 F37A4.2 0 5.657 0.949 - 0.968 - 0.937 0.946 0.930 0.927
68. C52E4.6 cyl-1 6405 5.657 0.940 - 0.939 - 0.953 0.957 0.909 0.959 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
69. Y73B6BL.18 smg-3 2772 5.656 0.927 - 0.943 - 0.969 0.948 0.919 0.950 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_500974]
70. Y65B4BR.5 icd-2 58321 5.656 0.937 - 0.931 - 0.957 0.955 0.951 0.925 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
71. T27A10.2 T27A10.2 0 5.655 0.926 - 0.935 - 0.955 0.952 0.929 0.958
72. R144.7 larp-1 24669 5.655 0.920 - 0.931 - 0.965 0.958 0.950 0.931 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
73. Y44E3A.1 Y44E3A.1 0 5.655 0.953 - 0.974 - 0.910 0.968 0.941 0.909
74. C36E8.4 C36E8.4 0 5.654 0.927 - 0.909 - 0.944 0.973 0.950 0.951
75. C26E6.5 fsn-1 6615 5.653 0.905 - 0.958 - 0.948 0.955 0.929 0.958 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
76. T07D4.3 rha-1 5898 5.653 0.851 - 0.946 - 0.973 0.975 0.948 0.960 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
77. T17E9.1 kin-18 8172 5.652 0.889 - 0.944 - 0.957 0.960 0.954 0.948 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
78. Y41E3.4 qars-1 4391 5.651 0.940 - 0.929 - 0.931 0.983 0.927 0.941 Probable glutamine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:O62431]
79. C01G10.9 C01G10.9 0 5.651 0.955 - 0.932 - 0.938 0.939 0.940 0.947 Methylthioribose-1-phosphate isomerase [Source:UniProtKB/Swiss-Prot;Acc:Q93169]
80. T08D2.1 T08D2.1 0 5.651 0.897 - 0.963 - 0.967 0.974 0.933 0.917
81. C43E11.1 acin-1 7781 5.65 0.924 - 0.965 - 0.940 0.960 0.958 0.903 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
82. C36B1.3 rpb-3 4442 5.65 0.939 - 0.920 - 0.953 0.961 0.915 0.962 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
83. F42A6.7 hrp-1 28201 5.65 0.945 - 0.961 - 0.940 0.955 0.940 0.909 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
84. C49C3.7 C49C3.7 3004 5.649 0.915 - 0.917 - 0.976 0.947 0.925 0.969
85. F55F8.5 wdr-12 5052 5.649 0.950 - 0.915 - 0.940 0.974 0.912 0.958 Ribosome biogenesis protein WDR12 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91343]
86. Y54E5A.4 npp-4 6288 5.648 0.948 - 0.962 - 0.930 0.951 0.901 0.956 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
87. D2089.1 rsp-7 11057 5.648 0.902 - 0.955 - 0.940 0.974 0.941 0.936 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
88. Y38C1AA.2 csn-3 3451 5.648 0.943 - 0.955 - 0.931 0.954 0.922 0.943 COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N425]
89. W02B12.3 rsp-1 9235 5.647 0.960 - 0.957 - 0.901 0.929 0.947 0.953 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
90. C18D11.4 rsp-8 18308 5.647 0.914 - 0.963 - 0.938 0.937 0.950 0.945 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
91. F26A3.4 F26A3.4 11358 5.647 0.919 - 0.911 - 0.951 0.929 0.965 0.972
92. T08B2.9 fars-1 12650 5.647 0.953 - 0.945 - 0.944 0.949 0.923 0.933 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
93. R02D3.5 fnta-1 5258 5.646 0.960 - 0.935 - 0.917 0.944 0.914 0.976 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
94. K12D12.2 npp-3 6914 5.646 0.921 - 0.944 - 0.940 0.962 0.934 0.945 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
95. B0025.2 csn-2 5205 5.645 0.943 - 0.927 - 0.965 0.964 0.922 0.924 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
96. C25D7.8 otub-1 7941 5.645 0.953 - 0.955 - 0.924 0.945 0.912 0.956 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
97. W01B6.9 ndc-80 4670 5.645 0.901 - 0.974 - 0.957 0.958 0.909 0.946 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
98. F11A10.8 cpsf-4 2079 5.644 0.903 - 0.961 - 0.938 0.974 0.930 0.938 Cleavage and Polyadenylation Specificity Factor [Source:RefSeq peptide;Acc:NP_001023126]
99. Y43B11AL.1 Y43B11AL.1 0 5.642 0.931 - 0.951 - 0.933 0.945 0.944 0.938
100. B0035.3 B0035.3 4118 5.642 0.917 - 0.966 - 0.922 0.937 0.945 0.955

There are 1399 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA