C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y54G11A.4

Gene ID Gene Name Reads Transcripts Annotation
Y54G11A.4 Y54G11A.4 0 Y54G11A.4

Genes with expression patterns similar to Y54G11A.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y54G11A.4 Y54G11A.4 0 6 1.000 - 1.000 - 1.000 1.000 1.000 1.000
2. F58G11.4 F58G11.4 0 5.849 0.962 - 0.974 - 0.984 0.987 0.958 0.984
3. F18E2.3 scc-3 13464 5.842 0.986 - 0.981 - 0.976 0.965 0.977 0.957 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
4. F58B6.3 par-2 3914 5.841 0.957 - 0.966 - 0.987 0.991 0.967 0.973
5. Y43C5A.6 rad-51 5327 5.836 0.961 - 0.976 - 0.979 0.983 0.976 0.961 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
6. Y73F8A.34 tag-349 7966 5.825 0.960 - 0.981 - 0.960 0.972 0.959 0.993
7. C18G1.4 pgl-3 5291 5.821 0.947 - 0.974 - 0.977 0.970 0.981 0.972 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
8. C34B2.7 sdha-2 3043 5.821 0.973 - 0.903 - 0.988 0.986 0.977 0.994 Succinate dehydrogenase [Source:RefSeq peptide;Acc:NP_492798]
9. W05F2.7 W05F2.7 1179 5.819 0.967 - 0.959 - 0.973 0.988 0.978 0.954
10. F35G12.8 smc-4 6202 5.819 0.985 - 0.972 - 0.967 0.970 0.959 0.966 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
11. K12D12.1 top-2 18694 5.817 0.970 - 0.966 - 0.980 0.970 0.954 0.977 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
12. ZK1098.8 mut-7 4940 5.806 0.967 - 0.978 - 0.973 0.963 0.964 0.961 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
13. T07C4.10 T07C4.10 1563 5.804 0.964 - 0.973 - 0.958 0.966 0.958 0.985
14. T07D4.3 rha-1 5898 5.8 0.937 - 0.954 - 0.983 0.981 0.968 0.977 Probable ATP-dependent RNA helicase A [Source:UniProtKB/Swiss-Prot;Acc:Q22307]
15. C17E4.10 C17E4.10 7034 5.797 0.972 - 0.976 - 0.963 0.979 0.965 0.942
16. F46A9.4 skr-2 16831 5.792 0.950 - 0.950 - 0.972 0.987 0.957 0.976 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
17. Y65B4BL.2 deps-1 18277 5.791 0.978 - 0.980 - 0.928 0.956 0.969 0.980
18. C43E11.1 acin-1 7781 5.791 0.960 - 0.956 - 0.960 0.966 0.981 0.968 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
19. C18G1.5 hil-4 21692 5.789 0.955 - 0.985 - 0.932 0.972 0.961 0.984 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
20. C29E4.2 kle-2 5527 5.787 0.958 - 0.964 - 0.990 0.972 0.952 0.951 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
21. D2089.1 rsp-7 11057 5.786 0.955 - 0.967 - 0.975 0.969 0.954 0.966 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
22. C36B1.3 rpb-3 4442 5.785 0.951 - 0.969 - 0.964 0.971 0.951 0.979 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
23. T16G12.7 T16G12.7 764 5.785 0.968 - 0.974 - 0.957 0.971 0.950 0.965 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_499229]
24. C07A9.5 C07A9.5 0 5.784 0.943 - 0.954 - 0.980 0.968 0.958 0.981 Uncharacterized calcium-binding protein C07A9.5 [Source:UniProtKB/Swiss-Prot;Acc:P34316]
25. K10D2.3 cid-1 7175 5.784 0.962 - 0.965 - 0.973 0.974 0.967 0.943 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
26. C32E8.6 C32E8.6 0 5.783 0.958 - 0.947 - 0.985 0.985 0.956 0.952
27. Y37E11AL.4 Y37E11AL.4 54 5.783 0.953 - 0.959 - 0.982 0.961 0.963 0.965
28. C40C9.3 C40C9.3 0 5.782 0.953 - 0.970 - 0.970 0.939 0.970 0.980
29. Y34D9A.4 spd-1 3396 5.782 0.956 - 0.954 - 0.991 0.979 0.944 0.958 SPD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ED58]
30. Y81G3A.3 gcn-2 5831 5.781 0.966 - 0.940 - 0.972 0.985 0.976 0.942 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
31. T12D8.2 drr-2 16208 5.779 0.945 - 0.912 - 0.987 0.986 0.970 0.979 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
32. D2005.6 D2005.6 0 5.778 0.966 - 0.929 - 0.980 0.978 0.983 0.942
33. D1081.9 D1081.9 3792 5.778 0.963 - 0.969 - 0.982 0.960 0.948 0.956
34. F17A9.4 F17A9.4 3508 5.778 0.939 - 0.968 - 0.977 0.979 0.978 0.937
35. T17E9.1 kin-18 8172 5.778 0.964 - 0.986 - 0.965 0.965 0.964 0.934 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
36. F25B5.2 nop-1 4127 5.777 0.968 - 0.977 - 0.963 0.963 0.958 0.948 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
37. F37E3.1 ncbp-1 5649 5.775 0.976 - 0.967 - 0.956 0.966 0.965 0.945 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
38. F59E12.3 F59E12.3 138 5.775 0.956 - 0.985 - 0.966 0.970 0.961 0.937
39. C30B5.6 C30B5.6 0 5.771 0.962 - 0.956 - 0.965 0.975 0.946 0.967
40. C03D6.4 npp-14 4889 5.771 0.966 - 0.944 - 0.965 0.983 0.934 0.979 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492568]
41. T01C3.1 cdt-2 5193 5.77 0.937 - 0.974 - 0.971 0.961 0.955 0.972 CDT (S. pombe CDC10 Dependent Transcript) homolog [Source:RefSeq peptide;Acc:NP_506685]
42. R06F6.5 npp-19 5067 5.769 0.961 - 0.961 - 0.978 0.970 0.958 0.941 Nucleoporin NUP53 [Source:UniProtKB/Swiss-Prot;Acc:Q09601]
43. F19F10.12 F19F10.12 2474 5.769 0.966 - 0.966 - 0.954 0.974 0.973 0.936
44. Y63D3A.4 tdpt-1 2906 5.769 0.919 - 0.962 - 0.990 0.978 0.962 0.958 5'-tyrosyl-DNA phosphodiesterase [Source:UniProtKB/Swiss-Prot;Acc:Q9XWG3]
45. F46B6.6 F46B6.6 1570 5.767 0.953 - 0.965 - 0.976 0.975 0.946 0.952
46. Y61A9LA.8 sut-2 11388 5.765 0.956 - 0.951 - 0.976 0.969 0.960 0.953 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
47. C39E9.13 rfc-3 9443 5.764 0.938 - 0.983 - 0.962 0.959 0.946 0.976 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
48. F26A1.3 F26A1.3 601 5.764 0.941 - 0.972 - 0.961 0.964 0.975 0.951
49. C48B4.12 C48B4.12 23119 5.763 0.931 - 0.969 - 0.981 0.972 0.976 0.934
50. F52B5.5 cep-1 2194 5.763 0.945 - 0.959 - 0.971 0.974 0.939 0.975 Transcription factor cep-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20646]
51. F28B3.7 him-1 18274 5.763 0.978 - 0.968 - 0.951 0.952 0.951 0.963 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
52. Y2H9A.1 mes-4 3566 5.763 0.956 - 0.969 - 0.977 0.956 0.951 0.954 Histone-lysine N-methyltransferase mes-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9NH52]
53. K05C4.8 K05C4.8 0 5.761 0.951 - 0.948 - 0.985 0.982 0.977 0.918
54. F56A3.3 npp-6 5425 5.761 0.964 - 0.967 - 0.955 0.972 0.940 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
55. T24F1.2 samp-1 8422 5.76 0.953 - 0.981 - 0.972 0.972 0.956 0.926 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
56. Y11D7A.12 flh-1 4612 5.759 0.912 - 0.980 - 0.975 0.974 0.970 0.948 FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501618]
57. C47D12.1 trr-1 4646 5.758 0.947 - 0.971 - 0.970 0.955 0.978 0.937 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
58. R07B7.4 R07B7.4 775 5.758 0.947 - 0.938 - 0.934 0.990 0.963 0.986
59. D1007.7 nrd-1 6738 5.756 0.975 - 0.976 - 0.970 0.945 0.939 0.951 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
60. C36B1.8 gls-1 8617 5.756 0.985 - 0.975 - 0.959 0.937 0.951 0.949 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
61. C26E6.5 fsn-1 6615 5.754 0.965 - 0.986 - 0.936 0.962 0.965 0.940 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
62. R06C7.1 wago-1 4303 5.754 0.951 - 0.963 - 0.959 0.974 0.968 0.939 Argonaute protein wago-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21770]
63. T20G5.11 rde-4 3966 5.754 0.981 - 0.959 - 0.941 0.972 0.919 0.982 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
64. C09H10.6 nasp-1 6094 5.753 0.958 - 0.971 - 0.953 0.955 0.959 0.957 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
65. F23C8.11 F23C8.11 0 5.752 0.935 - 0.969 - 0.960 0.965 0.945 0.978
66. T09F3.4 T09F3.4 131 5.752 0.970 - 0.965 - 0.957 0.962 0.951 0.947
67. T27A10.2 T27A10.2 0 5.752 0.963 - 0.981 - 0.952 0.962 0.928 0.966
68. D1081.8 cdc-5L 8553 5.752 0.972 - 0.976 - 0.934 0.952 0.955 0.963 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
69. K04C2.4 brd-1 2439 5.75 0.956 - 0.961 - 0.921 0.973 0.949 0.990 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
70. R07G3.3 npp-21 3792 5.749 0.938 - 0.959 - 0.973 0.986 0.943 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
71. K07C5.9 K07C5.9 266 5.748 0.953 - 0.975 - 0.952 0.972 0.917 0.979
72. F01G4.3 skih-2 3353 5.747 0.972 - 0.946 - 0.964 0.951 0.953 0.961 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
73. T27D1.1 cyn-9 2940 5.747 0.935 - 0.904 - 0.982 0.987 0.970 0.969 Peptidyl-prolyl cis-trans isomerase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q09637]
74. F46F11.10 F46F11.10 968 5.747 0.956 - 0.982 - 0.968 0.964 0.953 0.924
75. F58A4.3 hcp-3 8787 5.745 0.937 - 0.989 - 0.928 0.966 0.968 0.957 Histone H3-like centromeric protein hcp-3 [Source:UniProtKB/Swiss-Prot;Acc:P34470]
76. C16C10.2 C16C10.2 2303 5.744 0.953 - 0.973 - 0.982 0.945 0.959 0.932 Probable U3 small nucleolar RNA-associated protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q09462]
77. B0334.5 B0334.5 4713 5.743 0.947 - 0.983 - 0.971 0.958 0.952 0.932
78. M106.1 mix-1 7950 5.743 0.943 - 0.987 - 0.971 0.939 0.949 0.954 Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
79. ZK381.4 pgl-1 20651 5.742 0.940 - 0.926 - 0.959 0.973 0.978 0.966 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
80. T20H4.4 adr-2 5495 5.742 0.963 - 0.962 - 0.975 0.956 0.976 0.910 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
81. Y47D3A.31 Y47D3A.31 3677 5.742 0.958 - 0.973 - 0.934 0.966 0.938 0.973
82. D1054.14 prp-38 6504 5.741 0.948 - 0.964 - 0.967 0.966 0.909 0.987 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
83. C08B11.6 arp-6 4646 5.741 0.951 - 0.943 - 0.972 0.956 0.979 0.940 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
84. W01B6.9 ndc-80 4670 5.739 0.943 - 0.974 - 0.961 0.961 0.932 0.968 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
85. Y71F9B.16 dnj-30 4262 5.738 0.914 - 0.966 - 0.965 0.968 0.953 0.972 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
86. Y48G8AL.6 smg-2 12561 5.738 0.946 - 0.946 - 0.978 0.962 0.959 0.947 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
87. Y54E10A.13 Y54E10A.13 0 5.737 0.949 - 0.929 - 0.965 0.940 0.972 0.982
88. F59B2.7 rab-6.1 10749 5.737 0.940 - 0.968 - 0.973 0.942 0.962 0.952 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
89. F44E2.9 F44E2.9 1289 5.737 0.952 - 0.956 - 0.947 0.950 0.964 0.968
90. T13F2.9 T13F2.9 22593 5.737 0.960 - 0.965 - 0.959 0.944 0.958 0.951
91. C05C8.7 C05C8.7 7437 5.736 0.950 - 0.955 - 0.984 0.979 0.954 0.914
92. W03F8.6 W03F8.6 1573 5.736 0.966 - 0.977 - 0.974 0.954 0.947 0.918
93. K12D12.2 npp-3 6914 5.736 0.979 - 0.951 - 0.963 0.973 0.907 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
94. C49C3.7 C49C3.7 3004 5.735 0.944 - 0.985 - 0.978 0.965 0.907 0.956
95. F10B5.6 emb-27 2578 5.735 0.958 - 0.919 - 0.971 0.962 0.939 0.986 APC6; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG38]
96. Y71D11A.2 smr-1 4976 5.734 0.962 - 0.971 - 0.966 0.946 0.949 0.940 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
97. T10E9.3 T10E9.3 0 5.733 0.932 - 0.962 - 0.945 0.990 0.976 0.928
98. F16D3.2 rsd-6 8211 5.732 0.962 - 0.976 - 0.968 0.949 0.951 0.926
99. T08D2.1 T08D2.1 0 5.731 0.954 - 0.970 - 0.962 0.964 0.953 0.928
100. Y111B2A.14 pqn-80 6445 5.73 0.946 - 0.969 - 0.952 0.954 0.971 0.938 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_001255178]

There are 2145 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA