C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for K08D10.12

Gene ID Gene Name Reads Transcripts Annotation
K08D10.12 tsen-34 2644 K08D10.12a, K08D10.12b Trna (tRNA) Splicing ENdonuclease subunit related [Source:RefSeq peptide;Acc:NP_741368]

Genes with expression patterns similar to K08D10.12

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. K08D10.12 tsen-34 2644 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Trna (tRNA) Splicing ENdonuclease subunit related [Source:RefSeq peptide;Acc:NP_741368]
2. C53D5.6 imb-3 28921 7.566 0.923 0.935 0.963 0.935 0.978 0.944 0.970 0.918 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
3. F46A9.4 skr-2 16831 7.558 0.923 0.930 0.948 0.930 0.978 0.971 0.961 0.917 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
4. C27D11.1 egl-45 28282 7.554 0.933 0.931 0.954 0.931 0.976 0.953 0.931 0.945 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
5. D1054.14 prp-38 6504 7.553 0.921 0.936 0.958 0.936 0.966 0.980 0.932 0.924 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
6. C50C3.6 prp-8 19582 7.552 0.904 0.951 0.958 0.951 0.972 0.972 0.910 0.934 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
7. F56D1.7 daz-1 23684 7.549 0.931 0.919 0.955 0.919 0.961 0.971 0.965 0.928 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
8. F20D12.1 csr-1 16351 7.533 0.956 0.926 0.972 0.926 0.958 0.959 0.924 0.912 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
9. Y65B4BR.5 icd-2 58321 7.527 0.934 0.923 0.943 0.923 0.963 0.959 0.965 0.917 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
10. F08H9.1 coh-3 2202 7.524 0.877 0.923 0.941 0.923 0.982 0.966 0.940 0.972 COHesin family [Source:RefSeq peptide;Acc:NP_506583]
11. D2030.6 prg-1 26751 7.522 0.913 0.920 0.965 0.920 0.963 0.963 0.963 0.915 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
12. Y54E10A.9 vbh-1 28746 7.522 0.940 0.927 0.961 0.927 0.972 0.933 0.928 0.934 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
13. Y38C1AA.2 csn-3 3451 7.518 0.902 0.950 0.951 0.950 0.935 0.945 0.936 0.949 COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N425]
14. F59B2.7 rab-6.1 10749 7.518 0.915 0.914 0.956 0.914 0.975 0.956 0.917 0.971 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
15. C06E7.1 sams-3 26921 7.518 0.940 0.936 0.961 0.936 0.969 0.952 0.955 0.869 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
16. F28B3.7 him-1 18274 7.517 0.866 0.937 0.952 0.937 0.970 0.960 0.965 0.930 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
17. W03F9.5 ttb-1 8682 7.514 0.905 0.938 0.942 0.938 0.980 0.953 0.938 0.920 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
18. W09C5.7 W09C5.7 2359 7.514 0.951 0.929 0.946 0.929 0.970 0.937 0.941 0.911
19. T05F1.6 hsr-9 13312 7.509 0.857 0.937 0.957 0.937 0.970 0.965 0.967 0.919
20. T20H4.3 pars-1 8167 7.509 0.933 0.953 0.946 0.953 0.975 0.943 0.923 0.883 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
21. K04G2.1 iftb-1 12590 7.502 0.905 0.934 0.965 0.934 0.986 0.929 0.919 0.930 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
22. B0432.2 djr-1.1 8628 7.501 0.939 0.914 0.942 0.914 0.974 0.956 0.918 0.944 Glutathione-independent glyoxalase DJR-1.1 [Source:UniProtKB/Swiss-Prot;Acc:P90994]
23. Y71F9B.16 dnj-30 4262 7.498 0.924 0.937 0.926 0.937 0.961 0.954 0.943 0.916 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
24. F56F3.1 ifet-1 25772 7.495 0.934 0.931 0.969 0.931 0.918 0.950 0.961 0.901 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
25. C08B11.6 arp-6 4646 7.493 0.904 0.922 0.929 0.922 0.981 0.967 0.946 0.922 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
26. F45H11.3 hpo-35 8299 7.493 0.924 0.936 0.939 0.936 0.967 0.949 0.933 0.909
27. Y37E3.8 Y37E3.8 71903 7.492 0.881 0.912 0.957 0.912 0.954 0.971 0.952 0.953
28. F46B6.3 smg-4 4959 7.49 0.910 0.929 0.953 0.929 0.969 0.936 0.948 0.916 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
29. C15F1.4 ppp-1 1774 7.49 0.949 0.953 0.887 0.953 0.936 0.976 0.943 0.893 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
30. Y71H2AM.19 laf-1 9160 7.487 0.932 0.939 0.904 0.939 0.978 0.943 0.908 0.944 Putative DEAD-box RNA helicase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:D0PV95]
31. F44A2.1 tag-153 16535 7.486 0.912 0.920 0.959 0.920 0.967 0.947 0.932 0.929
32. F56B3.12 skr-18 6534 7.486 0.948 0.904 0.946 0.904 0.963 0.984 0.936 0.901 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_741300]
33. T20G5.11 rde-4 3966 7.485 0.909 0.918 0.954 0.918 0.945 0.966 0.956 0.919 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
34. ZK856.12 hpo-40 7855 7.484 0.929 0.916 0.958 0.916 0.951 0.964 0.958 0.892
35. F57B9.5 byn-1 58236 7.483 0.941 0.920 0.925 0.920 0.975 0.955 0.924 0.923 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
36. ZC410.7 lpl-1 5101 7.481 0.957 0.897 0.926 0.897 0.970 0.970 0.929 0.935 LiPoate Ligase [Source:RefSeq peptide;Acc:NP_501580]
37. C16A11.4 C16A11.4 4670 7.479 0.894 0.926 0.935 0.926 0.958 0.955 0.945 0.940
38. T10C6.4 srx-44 8454 7.479 0.888 0.920 0.950 0.920 0.970 0.961 0.941 0.929 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
39. C48E7.3 lpd-2 10330 7.476 0.890 0.925 0.939 0.925 0.971 0.972 0.931 0.923 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
40. K08D10.3 rnp-3 3872 7.473 0.910 0.944 0.944 0.944 0.920 0.962 0.913 0.936 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_500505]
41. Y73F8A.34 tag-349 7966 7.471 0.852 0.927 0.924 0.927 0.960 0.983 0.961 0.937
42. C08C3.4 cyk-7 12075 7.471 0.925 0.921 0.963 0.921 0.981 0.957 0.871 0.932 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
43. F10G8.3 rae-1 7542 7.47 0.943 0.933 0.967 0.933 0.964 0.944 0.905 0.881 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
44. F18E2.3 scc-3 13464 7.469 0.875 0.911 0.938 0.911 0.986 0.965 0.941 0.942 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
45. T09A5.7 T09A5.7 5907 7.469 0.942 0.917 0.936 0.917 0.933 0.969 0.939 0.916
46. Y39G10AL.3 cdk-7 3495 7.468 0.876 0.939 0.910 0.939 0.967 0.975 0.944 0.918 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
47. T25D3.2 mrpl-28 4649 7.468 0.931 0.943 0.974 0.943 0.947 0.942 0.911 0.877 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_493672]
48. K03B4.2 K03B4.2 21796 7.467 0.931 0.924 0.944 0.924 0.964 0.970 0.931 0.879
49. Y105E8A.17 ekl-4 4732 7.466 0.872 0.923 0.927 0.923 0.987 0.965 0.949 0.920
50. T23D8.4 eif-3.C 15343 7.465 0.916 0.945 0.947 0.945 0.964 0.949 0.920 0.879 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
51. C34E10.5 prmt-5 12277 7.464 0.933 0.924 0.973 0.924 0.920 0.955 0.929 0.906 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
52. R08D7.3 eif-3.D 6740 7.464 0.920 0.946 0.950 0.946 0.974 0.936 0.903 0.889 Eukaryotic translation initiation factor 3 subunit D [Source:UniProtKB/Swiss-Prot;Acc:P30642]
53. T24C4.1 ucr-2.3 7057 7.463 0.943 0.887 0.951 0.887 0.978 0.955 0.938 0.924 Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_497284]
54. F31D4.3 fkb-6 21313 7.459 0.921 0.914 0.968 0.914 0.977 0.959 0.899 0.907 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
55. T05H4.6 erfa-1 12542 7.458 0.937 0.926 0.953 0.926 0.942 0.958 0.948 0.868 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
56. Y54E2A.11 eif-3.B 13795 7.458 0.925 0.916 0.947 0.916 0.976 0.951 0.938 0.889 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
57. F39H11.5 pbs-7 13631 7.45 0.869 0.933 0.955 0.933 0.976 0.942 0.921 0.921 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
58. C34B2.6 C34B2.6 7529 7.45 0.921 0.902 0.964 0.902 0.972 0.949 0.956 0.884 Lon protease homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O44952]
59. ZK381.4 pgl-1 20651 7.449 0.885 0.935 0.954 0.935 0.955 0.943 0.944 0.898 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
60. ZK652.1 snr-5 5993 7.448 0.941 0.931 0.922 0.931 0.954 0.952 0.917 0.900 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
61. K07C5.8 cash-1 10523 7.448 0.892 0.909 0.931 0.909 0.968 0.965 0.935 0.939 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
62. Y40B1B.5 eif-3.J 15061 7.448 0.920 0.937 0.959 0.937 0.973 0.932 0.912 0.878 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
63. T23B12.7 dnj-22 2874 7.448 0.905 0.934 0.920 0.934 0.962 0.966 0.925 0.902 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_505178]
64. T10F2.1 gars-1 7204 7.447 0.926 0.927 0.933 0.927 0.966 0.957 0.882 0.929 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
65. T17E9.2 nmt-1 8017 7.447 0.925 0.937 0.951 0.937 0.942 0.950 0.936 0.869 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
66. F48E8.6 disl-2 8774 7.446 0.896 0.921 0.947 0.921 0.988 0.958 0.920 0.895 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
67. Y48G8AL.6 smg-2 12561 7.445 0.916 0.916 0.953 0.916 0.977 0.958 0.907 0.902 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
68. C35D10.7 C35D10.7 2964 7.443 0.895 0.927 0.919 0.927 0.962 0.974 0.890 0.949
69. F22D6.3 nars-1 18624 7.442 0.905 0.954 0.956 0.954 0.954 0.934 0.901 0.884 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
70. Y113G7B.23 swsn-1 13766 7.44 0.888 0.926 0.964 0.926 0.955 0.947 0.935 0.899 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
71. C08B11.5 sap-49 10553 7.44 0.886 0.913 0.960 0.913 0.949 0.963 0.961 0.895 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
72. Y67D8C.5 eel-1 30623 7.44 0.898 0.928 0.959 0.928 0.962 0.923 0.936 0.906 Enhancer of EfL-1 mutant phenotype [Source:RefSeq peptide;Acc:NP_500284]
73. EEED8.16 brap-2 3123 7.437 0.926 0.931 0.953 0.931 0.957 0.977 0.940 0.822 BRCA1-associated protein homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q95QN6]
74. Y61A9LA.8 sut-2 11388 7.436 0.891 0.919 0.946 0.919 0.978 0.940 0.939 0.904 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
75. F58A4.8 tbg-1 2839 7.436 0.835 0.923 0.959 0.923 0.973 0.975 0.909 0.939 Tubulin gamma chain [Source:UniProtKB/Swiss-Prot;Acc:P34475]
76. C25D7.8 otub-1 7941 7.436 0.918 0.941 0.954 0.941 0.915 0.959 0.945 0.863 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
77. B0511.10 eif-3.E 10041 7.434 0.947 0.934 0.938 0.934 0.959 0.951 0.916 0.855 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
78. B0205.7 kin-3 29775 7.432 0.936 0.911 0.952 0.911 0.967 0.945 0.900 0.910 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
79. F36A4.7 ama-1 13620 7.432 0.874 0.949 0.968 0.949 0.960 0.946 0.922 0.864 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
80. F56A3.3 npp-6 5425 7.43 0.868 0.905 0.931 0.905 0.962 0.970 0.936 0.953 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
81. C18A3.3 C18A3.3 9387 7.429 0.822 0.926 0.918 0.926 0.960 0.949 0.962 0.966 Probable rRNA-processing protein EBP2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09958]
82. F39B2.2 uev-1 13597 7.428 0.874 0.945 0.932 0.945 0.973 0.890 0.955 0.914 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
83. F37A4.8 isw-1 9337 7.428 0.866 0.919 0.941 0.919 0.982 0.954 0.914 0.933 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
84. Y48G8AL.1 herc-1 3873 7.427 0.902 0.919 0.955 0.919 0.954 0.969 0.891 0.918 HECT and RCC domain E3 ubiquitin ligase [Source:RefSeq peptide;Acc:NP_001293432]
85. ZK616.6 perm-3 16186 7.426 0.893 0.930 0.960 0.930 0.928 0.965 0.926 0.894 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
86. Y102A5A.1 cand-1 11808 7.425 0.941 0.908 0.962 0.908 0.967 0.924 0.943 0.872 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
87. B0205.1 B0205.1 2403 7.425 0.830 0.936 0.916 0.936 0.980 0.970 0.919 0.938
88. T12D8.2 drr-2 16208 7.425 0.872 0.906 0.958 0.906 0.980 0.958 0.935 0.910 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
89. Y37E11AL.7 map-1 2499 7.424 0.927 0.908 0.935 0.908 0.967 0.940 0.926 0.913 Methionine aminopeptidase 1 [Source:RefSeq peptide;Acc:NP_500396]
90. E01A2.4 let-504 9788 7.424 0.884 0.919 0.915 0.919 0.952 0.948 0.955 0.932
91. F35G12.2 idhg-1 30065 7.424 0.925 0.924 0.942 0.924 0.959 0.941 0.911 0.898 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
92. K01G5.1 rnf-113 4336 7.424 0.940 0.951 0.944 0.951 0.915 0.887 0.951 0.885 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
93. Y48B6A.14 hmg-1.1 88723 7.423 0.855 0.914 0.963 0.914 0.948 0.963 0.952 0.914 HMG [Source:RefSeq peptide;Acc:NP_496970]
94. T10F2.4 prp-19 11298 7.422 0.905 0.920 0.960 0.920 0.959 0.927 0.945 0.886 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
95. K11D12.2 pqn-51 15951 7.422 0.917 0.921 0.956 0.921 0.940 0.954 0.920 0.893 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
96. K10D2.3 cid-1 7175 7.422 0.927 0.934 0.955 0.934 0.958 0.951 0.851 0.912 Caffeine Induced Death (S. pombe Cid) homolog [Source:RefSeq peptide;Acc:NP_498099]
97. K12D12.1 top-2 18694 7.421 0.832 0.936 0.942 0.936 0.975 0.964 0.905 0.931 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
98. F20C5.1 parg-1 2633 7.421 0.874 0.928 0.880 0.928 0.984 0.964 0.948 0.915 Poly(ADP-ribose) glycohydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q867X0]
99. F38A5.13 dnj-11 19678 7.42 0.865 0.940 0.942 0.940 0.988 0.938 0.853 0.954 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
100. C26D10.2 hel-1 28697 7.419 0.926 0.918 0.953 0.918 0.937 0.920 0.945 0.902 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]

There are 1173 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA