C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R10E4.5

Gene ID Gene Name Reads Transcripts Annotation
R10E4.5 nth-1 645 R10E4.5a, R10E4.5b, R10E4.5c, R10E4.5d Endonuclease III homolog [Source:UniProtKB/Swiss-Prot;Acc:P54137]

Genes with expression patterns similar to R10E4.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R10E4.5 nth-1 645 6 1.000 1.000 1.000 1.000 1.000 1.000 - - Endonuclease III homolog [Source:UniProtKB/Swiss-Prot;Acc:P54137]
2. T01G9.4 npp-2 5361 5.519 0.938 0.873 0.939 0.873 0.935 0.961 - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
3. C39E9.13 rfc-3 9443 5.492 0.928 0.862 0.935 0.862 0.924 0.981 - - RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
4. T17E9.1 kin-18 8172 5.472 0.936 0.862 0.944 0.862 0.961 0.907 - - Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
5. C47D12.8 xpf-1 6173 5.46 0.928 0.872 0.961 0.872 0.927 0.900 - - (Xeroderma Pigmentosum group F) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_496498]
6. H06H21.6 ubxn-6 9202 5.459 0.950 0.870 0.954 0.870 0.937 0.878 - - UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
7. C48E7.3 lpd-2 10330 5.458 0.952 0.853 0.943 0.853 0.926 0.931 - - LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
8. F18E2.3 scc-3 13464 5.458 0.955 0.854 0.928 0.854 0.937 0.930 - - Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
9. F56D1.7 daz-1 23684 5.454 0.921 0.846 0.948 0.846 0.931 0.962 - - DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
10. F58B6.3 par-2 3914 5.453 0.917 0.877 0.923 0.877 0.955 0.904 - -
11. Y111B2A.18 rsp-3 43731 5.452 0.936 0.869 0.953 0.869 0.923 0.902 - - Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
12. D2089.1 rsp-7 11057 5.441 0.939 0.865 0.959 0.865 0.930 0.883 - - Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
13. C06E7.1 sams-3 26921 5.44 0.932 0.855 0.920 0.855 0.925 0.953 - - Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
14. C43E11.1 acin-1 7781 5.44 0.915 0.870 0.935 0.870 0.900 0.950 - - ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
15. T04A8.10 sel-13 3109 5.438 0.972 0.853 0.927 0.853 0.929 0.904 - - Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_497963]
16. Y73F8A.34 tag-349 7966 5.43 0.963 0.840 0.926 0.840 0.916 0.945 - -
17. T12E12.4 drp-1 7694 5.425 0.942 0.862 0.946 0.862 0.957 0.856 - - Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
18. T19B10.4 pqn-70 5002 5.423 0.936 0.915 0.964 0.915 0.868 0.825 - - Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_505850]
19. W05B10.1 his-74 21926 5.421 0.938 0.826 0.960 0.826 0.937 0.934 - - Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
20. CD4.6 pas-6 18332 5.418 0.927 0.851 0.959 0.851 0.926 0.904 - - Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
21. D1054.14 prp-38 6504 5.412 0.950 0.844 0.911 0.844 0.943 0.920 - - yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
22. Y38C1AA.2 csn-3 3451 5.411 0.950 0.876 0.935 0.876 0.916 0.858 - - COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N425]
23. Y32F6A.3 pap-1 11972 5.41 0.950 0.856 0.941 0.856 0.951 0.856 - - Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
24. D1007.16 eaf-1 4081 5.406 0.903 0.871 0.939 0.871 0.964 0.858 - - ELL Associated Factor homolog [Source:RefSeq peptide;Acc:NP_491404]
25. F20C5.1 parg-1 2633 5.403 0.935 0.851 0.858 0.851 0.966 0.942 - - Poly(ADP-ribose) glycohydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q867X0]
26. M106.1 mix-1 7950 5.395 0.904 0.837 0.915 0.837 0.945 0.957 - - Mitotic chromosome and X-chromosome-associated protein mix-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09591]
27. F01G4.3 skih-2 3353 5.393 0.935 0.824 0.932 0.824 0.927 0.951 - - SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
28. T10F2.4 prp-19 11298 5.39 0.930 0.847 0.952 0.847 0.922 0.892 - - Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
29. F31D4.3 fkb-6 21313 5.388 0.938 0.834 0.922 0.834 0.963 0.897 - - FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
30. C04F5.1 sid-1 2761 5.387 0.911 0.881 0.883 0.881 0.881 0.950 - - Systemic RNA interference defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZC8]
31. Y39G10AL.3 cdk-7 3495 5.387 0.952 0.823 0.945 0.823 0.924 0.920 - - Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
32. C53D5.6 imb-3 28921 5.384 0.918 0.826 0.935 0.826 0.921 0.958 - - IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
33. W02D9.1 pri-2 6048 5.38 0.902 0.847 0.932 0.847 0.891 0.961 - - DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
34. C56C10.1 vps-33.2 2038 5.379 0.906 0.845 0.940 0.845 0.951 0.892 - - related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_495342]
35. C35D10.7 C35D10.7 2964 5.374 0.960 0.806 0.915 0.806 0.976 0.911 - -
36. F56A3.3 npp-6 5425 5.374 0.958 0.841 0.923 0.841 0.903 0.908 - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
37. F55G1.8 plk-3 12036 5.372 0.952 0.834 0.949 0.834 0.881 0.922 - - Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
38. T05G5.3 cdk-1 14112 5.371 0.955 0.818 0.932 0.818 0.952 0.896 - - Cyclin-dependent kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:P34556]
39. W01B6.9 ndc-80 4670 5.371 0.939 0.813 0.933 0.813 0.957 0.916 - - Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
40. Y37E11AM.1 smgl-2 1915 5.37 0.917 0.825 0.936 0.825 0.908 0.959 - -
41. T10H9.3 syx-18 2416 5.367 0.907 0.852 0.906 0.852 0.967 0.883 - - SYntaXin [Source:RefSeq peptide;Acc:NP_504687]
42. W02F12.6 sna-1 7338 5.365 0.943 0.811 0.958 0.811 0.892 0.950 - - Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
43. Y49E10.3 pph-4.2 8662 5.363 0.913 0.857 0.951 0.857 0.923 0.862 - - Serine/threonine-protein phosphatase 4 catalytic subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT8]
44. F26H11.1 kbp-3 4177 5.362 0.957 0.806 0.935 0.806 0.944 0.914 - - Kinetochore-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O45406]
45. Y48B6A.14 hmg-1.1 88723 5.359 0.911 0.823 0.957 0.823 0.922 0.923 - - HMG [Source:RefSeq peptide;Acc:NP_496970]
46. T23B12.4 natc-1 7759 5.358 0.932 0.822 0.930 0.822 0.953 0.899 - - N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
47. Y18D10A.20 pfn-1 33871 5.356 0.886 0.851 0.954 0.851 0.956 0.858 - - Profilin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XW16]
48. T23B12.7 dnj-22 2874 5.355 0.950 0.812 0.907 0.812 0.941 0.933 - - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_505178]
49. ZK1248.13 ZK1248.13 1528 5.353 0.922 0.808 0.957 0.808 0.892 0.966 - -
50. Y65B4BL.2 deps-1 18277 5.351 0.936 0.833 0.957 0.833 0.893 0.899 - -
51. F52C12.4 denn-4 4398 5.351 0.917 0.841 0.926 0.841 0.951 0.875 - - DENN domain type RAB GEF [Source:RefSeq peptide;Acc:NP_001294384]
52. F08B4.5 pole-2 8234 5.351 0.938 0.844 0.954 0.844 0.908 0.863 - - Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
53. F16D3.2 rsd-6 8211 5.348 0.903 0.837 0.932 0.837 0.950 0.889 - -
54. Y71G12B.1 chaf-2 3451 5.348 0.922 0.827 0.907 0.827 0.950 0.915 - - CHromatin Assembly Factor [Source:RefSeq peptide;Acc:NP_490901]
55. Y71D11A.2 smr-1 4976 5.346 0.913 0.840 0.947 0.840 0.950 0.856 - - SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
56. Y55B1AR.2 Y55B1AR.2 4511 5.345 0.916 0.823 0.914 0.823 0.950 0.919 - -
57. B0414.3 hil-5 10816 5.34 0.917 0.845 0.953 0.845 0.831 0.949 - - Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
58. B0252.4 cyn-10 3765 5.334 0.964 0.804 0.900 0.804 0.917 0.945 - - Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
59. C48B4.11 C48B4.11 4384 5.333 0.934 0.838 0.950 0.838 0.856 0.917 - -
60. C08B11.2 hda-2 2313 5.333 0.952 0.879 0.932 0.879 0.813 0.878 - - Putative histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09440]
61. C27A2.1 smc-5 2176 5.333 0.888 0.838 0.956 0.838 0.892 0.921 - - SMC (structural maintenance of chromosomes) family [Source:RefSeq peptide;Acc:NP_494935]
62. Y55D9A.1 efa-6 10012 5.333 0.929 0.841 0.953 0.841 0.918 0.851 - - Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
63. F10E9.8 sas-4 3703 5.333 0.941 0.817 0.954 0.817 0.862 0.942 - - Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
64. R10H10.1 lpd-8 4272 5.333 0.953 0.826 0.913 0.826 0.888 0.927 - - LiPid Depleted [Source:RefSeq peptide;Acc:NP_501917]
65. F41H10.6 hda-6 3325 5.331 0.952 0.843 0.903 0.843 0.886 0.904 - - Histone deacetylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20296]
66. C18G1.5 hil-4 21692 5.329 0.908 0.823 0.932 0.823 0.884 0.959 - - Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
67. Y105E8A.17 ekl-4 4732 5.328 0.928 0.803 0.906 0.803 0.932 0.956 - -
68. F36D4.3 hum-2 16493 5.328 0.950 0.825 0.944 0.825 0.919 0.865 - - Heavy chain, Unconventional Myosin [Source:RefSeq peptide;Acc:NP_505433]
69. K07C5.8 cash-1 10523 5.327 0.954 0.805 0.946 0.805 0.944 0.873 - - CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
70. T13H5.7 rnh-2 3204 5.326 0.958 0.845 0.921 0.845 0.900 0.857 - - Ribonuclease H2 subunit A [Source:UniProtKB/Swiss-Prot;Acc:Q9U6P6]
71. Y74C9A.4 rcor-1 4686 5.325 0.903 0.795 0.914 0.795 0.938 0.980 - - RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207]
72. F55B12.3 sel-10 10304 5.324 0.937 0.849 0.957 0.849 0.915 0.817 - - F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
73. C07G1.4 wsp-1 11226 5.324 0.931 0.817 0.953 0.817 0.936 0.870 - - WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
74. F48E8.6 disl-2 8774 5.324 0.924 0.820 0.911 0.820 0.950 0.899 - - DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
75. B0348.6 ife-3 26859 5.323 0.911 0.832 0.957 0.832 0.917 0.874 - - Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
76. F32H2.4 thoc-3 3861 5.32 0.950 0.817 0.961 0.817 0.916 0.859 - - THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
77. B0025.2 csn-2 5205 5.32 0.950 0.825 0.916 0.825 0.905 0.899 - - COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
78. C25D7.8 otub-1 7941 5.318 0.942 0.821 0.952 0.821 0.872 0.910 - - Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
79. Y71F9B.16 dnj-30 4262 5.313 0.918 0.801 0.958 0.801 0.930 0.905 - - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
80. Y110A2AL.14 sqv-2 1760 5.312 0.885 0.818 0.911 0.818 0.973 0.907 - - Beta-1,3-galactosyltransferase sqv-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N491]
81. T01B7.3 rab-21 2347 5.311 0.956 0.876 0.883 0.876 0.841 0.879 - - RAB family [Source:RefSeq peptide;Acc:NP_495854]
82. F57B10.6 xpg-1 2000 5.311 0.841 0.856 0.900 0.856 0.898 0.960 - - XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_491891]
83. C26E6.4 rpb-2 7053 5.305 0.922 0.834 0.950 0.834 0.852 0.913 - - DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
84. C30G12.7 puf-8 5785 5.303 0.939 0.843 0.950 0.843 0.817 0.911 - - PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
85. T07E3.5 brc-2 3212 5.302 0.915 0.838 0.908 0.838 0.954 0.849 - - BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_498502]
86. Y94H6A.9 ubxn-2 7082 5.298 0.899 0.852 0.961 0.852 0.905 0.829 - - UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001023590]
87. F11A10.4 mon-2 6726 5.296 0.920 0.849 0.950 0.849 0.887 0.841 - - Monensin-resistant homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19338]
88. C34C12.3 pph-6 12139 5.293 0.938 0.837 0.957 0.837 0.912 0.812 - - Putative serine/threonine-protein phosphatase pph-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09496]
89. F35B12.5 sas-5 4606 5.293 0.915 0.816 0.901 0.816 0.965 0.880 - - Spindle assembly abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20010]
90. T01B11.3 syx-4 1573 5.291 0.899 0.803 0.918 0.803 0.916 0.952 - - Putative syntaxin-4 [Source:UniProtKB/Swiss-Prot;Acc:P91409]
91. F25B5.2 nop-1 4127 5.291 0.928 0.790 0.920 0.790 0.909 0.954 - - Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
92. F31E3.3 rfc-4 3828 5.288 0.951 0.792 0.934 0.792 0.900 0.919 - - Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
93. F43G9.10 mfap-1 9205 5.286 0.921 0.801 0.888 0.801 0.924 0.951 - - MicroFibrillar-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_492340]
94. F25G6.9 F25G6.9 3071 5.284 0.936 0.832 0.939 0.832 0.950 0.795 - -
95. W09D10.4 W09D10.4 7486 5.284 0.921 0.874 0.952 0.874 0.905 0.758 - -
96. C16A11.6 fbxc-44 1910 5.283 0.950 0.825 0.911 0.825 0.862 0.910 - - F-box C protein [Source:RefSeq peptide;Acc:NP_494746]
97. C16C10.1 C16C10.1 4030 5.283 0.927 0.849 0.913 0.849 0.968 0.777 - - Uncharacterized mitochondrial carrier C16C10.1 [Source:UniProtKB/Swiss-Prot;Acc:Q09461]
98. ZK742.1 xpo-1 20741 5.283 0.913 0.840 0.953 0.840 0.870 0.867 - - eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
99. F01G4.5 F01G4.5 2097 5.281 0.899 0.822 0.912 0.822 0.874 0.952 - -
100. F36F2.6 fcp-1 3946 5.281 0.877 0.833 0.900 0.833 0.875 0.963 - - FCP1 (yeast TFIIF-interacting CTD phosphatase subunit) homolog [Source:RefSeq peptide;Acc:NP_492423]

There are 234 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA