C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T01B11.3

Gene ID Gene Name Reads Transcripts Annotation
T01B11.3 syx-4 1573 T01B11.3 Putative syntaxin-4 [Source:UniProtKB/Swiss-Prot;Acc:P91409]

Genes with expression patterns similar to T01B11.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T01B11.3 syx-4 1573 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Putative syntaxin-4 [Source:UniProtKB/Swiss-Prot;Acc:P91409]
2. F31E3.3 rfc-4 3828 7.641 0.935 0.979 0.930 0.979 0.968 0.966 0.941 0.943 Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]
3. Y56A3A.17 npp-16 5391 7.624 0.927 0.975 0.971 0.975 0.968 0.964 0.934 0.910 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
4. Y74C9A.4 rcor-1 4686 7.622 0.935 0.975 0.954 0.975 0.967 0.943 0.931 0.942 RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207]
5. ZK856.12 hpo-40 7855 7.62 0.933 0.962 0.979 0.962 0.963 0.947 0.942 0.932
6. C46A5.9 hcf-1 6295 7.614 0.937 0.981 0.960 0.981 0.923 0.935 0.976 0.921 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
7. F55G1.8 plk-3 12036 7.609 0.884 0.979 0.960 0.979 0.950 0.970 0.935 0.952 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
8. F56F3.1 ifet-1 25772 7.604 0.929 0.979 0.965 0.979 0.946 0.913 0.948 0.945 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
9. F18E2.3 scc-3 13464 7.604 0.937 0.980 0.954 0.980 0.954 0.955 0.905 0.939 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
10. ZK1248.13 ZK1248.13 1528 7.597 0.903 0.979 0.957 0.979 0.969 0.980 0.928 0.902
11. Y39G10AR.7 ekl-7 7072 7.585 0.918 0.965 0.953 0.965 0.963 0.949 0.946 0.926
12. F56D1.7 daz-1 23684 7.583 0.927 0.958 0.971 0.958 0.954 0.962 0.905 0.948 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
13. Y39G10AL.3 cdk-7 3495 7.578 0.910 0.955 0.948 0.955 0.976 0.932 0.959 0.943 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
14. C08B11.5 sap-49 10553 7.577 0.931 0.961 0.962 0.961 0.972 0.921 0.937 0.932 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
15. C24G6.1 syp-2 2843 7.572 0.964 0.947 0.928 0.947 0.985 0.940 0.931 0.930
16. ZK1127.4 ZK1127.4 3088 7.569 0.905 0.968 0.979 0.968 0.968 0.927 0.919 0.935 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
17. F10G7.3 unc-85 5206 7.566 0.944 0.963 0.957 0.963 0.908 0.951 0.935 0.945 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
18. C53D5.6 imb-3 28921 7.564 0.923 0.949 0.936 0.949 0.977 0.955 0.947 0.928 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
19. K02F3.11 rnp-5 6205 7.563 0.933 0.957 0.934 0.957 0.973 0.941 0.953 0.915 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
20. C02B10.5 C02B10.5 9171 7.56 0.965 0.969 0.966 0.969 0.911 0.934 0.932 0.914
21. C08B6.9 aos-1 3892 7.56 0.968 0.978 0.967 0.978 0.930 0.899 0.907 0.933 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
22. F32H2.4 thoc-3 3861 7.56 0.942 0.970 0.952 0.970 0.974 0.917 0.898 0.937 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
23. T20B12.2 tbp-1 9014 7.559 0.930 0.959 0.960 0.959 0.973 0.930 0.934 0.914 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
24. D1054.14 prp-38 6504 7.559 0.948 0.964 0.939 0.964 0.956 0.952 0.935 0.901 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
25. D2030.6 prg-1 26751 7.554 0.866 0.930 0.981 0.930 0.955 0.972 0.966 0.954 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
26. F32E10.6 cec-5 10643 7.553 0.934 0.949 0.967 0.949 0.946 0.962 0.928 0.918 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
27. T28D9.2 rsp-5 6460 7.552 0.942 0.956 0.966 0.956 0.924 0.944 0.943 0.921 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
28. Y53C12B.3 nos-3 20231 7.548 0.917 0.972 0.967 0.972 0.900 0.959 0.929 0.932 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
29. Y105E8A.17 ekl-4 4732 7.546 0.929 0.983 0.951 0.983 0.970 0.924 0.951 0.855
30. K11D12.2 pqn-51 15951 7.543 0.948 0.971 0.971 0.971 0.960 0.903 0.897 0.922 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
31. Y71F9B.16 dnj-30 4262 7.541 0.946 0.969 0.930 0.969 0.969 0.947 0.911 0.900 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
32. C48E7.3 lpd-2 10330 7.54 0.920 0.975 0.938 0.975 0.955 0.912 0.911 0.954 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
33. F33H1.4 F33H1.4 2447 7.532 0.946 0.948 0.941 0.948 0.959 0.932 0.934 0.924
34. C48B4.11 C48B4.11 4384 7.531 0.911 0.971 0.927 0.971 0.938 0.928 0.951 0.934
35. F45H11.3 hpo-35 8299 7.529 0.913 0.947 0.952 0.947 0.960 0.953 0.913 0.944
36. Y54E2A.2 smg-9 4494 7.526 0.945 0.982 0.963 0.982 0.955 0.926 0.886 0.887
37. T05E11.4 spo-11 2806 7.523 0.939 0.983 0.953 0.983 0.966 0.945 0.884 0.870 Meiotic recombination protein spo-11 [Source:UniProtKB/Swiss-Prot;Acc:Q22236]
38. T05H4.14 gad-1 7979 7.523 0.929 0.976 0.946 0.976 0.953 0.945 0.928 0.870 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
39. F57B9.7 flap-1 5377 7.523 0.929 0.964 0.946 0.964 0.946 0.917 0.932 0.925 FLi1-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_741207]
40. Y54E5A.4 npp-4 6288 7.518 0.940 0.962 0.964 0.962 0.942 0.931 0.913 0.904 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
41. K01G5.4 ran-1 32379 7.516 0.940 0.962 0.913 0.962 0.951 0.934 0.934 0.920 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
42. T10F2.4 prp-19 11298 7.515 0.961 0.950 0.941 0.950 0.961 0.918 0.911 0.923 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
43. F46A9.4 skr-2 16831 7.515 0.934 0.945 0.959 0.945 0.976 0.953 0.939 0.864 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
44. F23F1.1 nfyc-1 9983 7.515 0.929 0.963 0.937 0.963 0.953 0.951 0.912 0.907 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
45. ZK381.1 him-3 4913 7.515 0.910 0.952 0.977 0.952 0.923 0.953 0.901 0.947 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
46. T07F8.3 gld-3 9324 7.514 0.912 0.966 0.954 0.966 0.947 0.913 0.935 0.921 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
47. C28H8.9 dpff-1 8684 7.514 0.945 0.976 0.970 0.976 0.952 0.917 0.851 0.927 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
48. C34D4.12 cyn-12 7363 7.514 0.951 0.960 0.946 0.960 0.921 0.944 0.882 0.950 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
49. Y37D8A.11 cec-7 8801 7.512 0.922 0.963 0.958 0.963 0.931 0.934 0.912 0.929 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
50. T23G7.5 pir-1 2816 7.512 0.920 0.946 0.926 0.946 0.965 0.920 0.941 0.948 Phosphatase Interacting with RNA/RNP [Source:RefSeq peptide;Acc:NP_495959]
51. T25G3.3 T25G3.3 7285 7.512 0.944 0.978 0.899 0.978 0.940 0.938 0.902 0.933
52. Y65B4BL.2 deps-1 18277 7.51 0.894 0.968 0.957 0.968 0.956 0.944 0.899 0.924
53. F32H2.1 snpc-4 7581 7.51 0.936 0.963 0.938 0.963 0.919 0.928 0.941 0.922 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
54. T20G5.11 rde-4 3966 7.509 0.941 0.943 0.943 0.943 0.937 0.961 0.934 0.907 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
55. C25D7.8 otub-1 7941 7.508 0.955 0.970 0.949 0.970 0.941 0.898 0.935 0.890 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
56. W01G7.3 rpb-11 7826 7.507 0.961 0.944 0.942 0.944 0.937 0.937 0.932 0.910 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
57. Y46G5A.4 snrp-200 13827 7.507 0.878 0.971 0.974 0.971 0.963 0.949 0.905 0.896 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
58. F52C9.7 mog-3 9880 7.507 0.939 0.957 0.955 0.957 0.939 0.953 0.919 0.888 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
59. T06A10.4 lsy-13 7631 7.506 0.940 0.972 0.959 0.972 0.950 0.915 0.930 0.868
60. T19B4.2 npp-7 13073 7.503 0.950 0.970 0.967 0.970 0.943 0.925 0.887 0.891 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
61. C39E9.13 rfc-3 9443 7.503 0.904 0.962 0.939 0.962 0.973 0.971 0.941 0.851 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_502517]
62. F42A6.7 hrp-1 28201 7.502 0.940 0.959 0.959 0.959 0.956 0.923 0.925 0.881 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
63. C02B10.2 snpn-1 5519 7.5 0.893 0.970 0.935 0.970 0.936 0.933 0.924 0.939 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
64. Y113G7B.5 fog-2 2753 7.498 0.924 0.971 0.958 0.971 0.928 0.926 0.894 0.926 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
65. R119.4 pqn-59 16065 7.496 0.891 0.974 0.959 0.974 0.927 0.947 0.897 0.927 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
66. F11A10.8 cpsf-4 2079 7.495 0.928 0.926 0.935 0.926 0.962 0.952 0.963 0.903 Cleavage and Polyadenylation Specificity Factor [Source:RefSeq peptide;Acc:NP_001023126]
67. Y54H5A.3 tag-262 4269 7.495 0.930 0.963 0.963 0.963 0.944 0.896 0.931 0.905
68. F59A2.1 npp-9 34375 7.495 0.921 0.973 0.951 0.973 0.909 0.911 0.911 0.946 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
69. ZK970.3 mdt-22 1925 7.493 0.944 0.942 0.881 0.942 0.979 0.948 0.923 0.934 Mediator of RNA polymerase II transcription subunit 22 [Source:UniProtKB/Swiss-Prot;Acc:Q23679]
70. C50F4.11 mdf-1 1633 7.493 0.908 0.969 0.952 0.969 0.938 0.953 0.954 0.850 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_505462]
71. C15F1.4 ppp-1 1774 7.492 0.928 0.934 0.924 0.934 0.977 0.916 0.944 0.935 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
72. B0035.12 sart-3 7188 7.492 0.916 0.963 0.964 0.963 0.908 0.943 0.894 0.941 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
73. F25B5.2 nop-1 4127 7.492 0.940 0.952 0.936 0.952 0.976 0.970 0.861 0.905 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
74. C27B7.1 spr-2 14958 7.491 0.920 0.985 0.957 0.985 0.942 0.912 0.891 0.899 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
75. C09G4.3 cks-1 17852 7.491 0.947 0.957 0.958 0.957 0.975 0.888 0.940 0.869 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
76. K03B4.2 K03B4.2 21796 7.49 0.947 0.973 0.904 0.973 0.959 0.881 0.916 0.937
77. K08E3.8 mdt-29 4678 7.49 0.914 0.960 0.959 0.960 0.952 0.918 0.925 0.902 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
78. R09B3.1 exo-3 4401 7.49 0.942 0.962 0.973 0.962 0.828 0.912 0.936 0.975 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
79. C52E4.6 cyl-1 6405 7.49 0.949 0.968 0.946 0.968 0.960 0.926 0.890 0.883 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
80. C25A1.4 C25A1.4 15507 7.488 0.955 0.947 0.952 0.947 0.931 0.907 0.934 0.915
81. T05H10.2 apn-1 5628 7.487 0.936 0.978 0.943 0.978 0.939 0.927 0.887 0.899 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
82. W02F12.6 sna-1 7338 7.487 0.937 0.965 0.923 0.965 0.959 0.953 0.917 0.868 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
83. C17E4.10 C17E4.10 7034 7.487 0.919 0.954 0.945 0.954 0.941 0.953 0.908 0.913
84. F10E9.7 F10E9.7 1842 7.485 0.952 0.932 0.930 0.932 0.925 0.957 0.932 0.925
85. B0511.9 cdc-26 3023 7.484 0.917 0.972 0.936 0.972 0.946 0.899 0.916 0.926 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_740914]
86. EEED8.7 rsp-4 13043 7.484 0.925 0.953 0.948 0.953 0.923 0.912 0.964 0.906 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
87. Y39E4B.2 snpc-1.2 5800 7.483 0.911 0.970 0.980 0.970 0.868 0.960 0.895 0.929 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
88. Y37D8A.9 mrg-1 14369 7.483 0.927 0.966 0.960 0.966 0.905 0.922 0.892 0.945 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
89. F18C5.2 wrn-1 3792 7.483 0.834 0.966 0.952 0.966 0.943 0.975 0.921 0.926 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
90. R07E5.14 rnp-4 11659 7.482 0.960 0.977 0.956 0.977 0.902 0.882 0.898 0.930 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
91. Y17G7A.1 hmg-12 29989 7.481 0.953 0.967 0.939 0.967 0.907 0.927 0.930 0.891 HMG [Source:RefSeq peptide;Acc:NP_496544]
92. Y116A8C.42 snr-1 17062 7.481 0.927 0.957 0.973 0.957 0.898 0.926 0.916 0.927 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
93. C43E11.1 acin-1 7781 7.48 0.894 0.954 0.954 0.954 0.967 0.973 0.911 0.873 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
94. F43G9.5 cfim-1 9169 7.48 0.955 0.970 0.959 0.970 0.906 0.884 0.881 0.955 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
95. F10E9.8 sas-4 3703 7.48 0.923 0.963 0.924 0.963 0.936 0.972 0.893 0.906 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
96. Y43F4B.4 npp-18 4780 7.479 0.958 0.977 0.961 0.977 0.962 0.844 0.917 0.883 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
97. Y110A7A.13 chp-1 6714 7.479 0.875 0.966 0.940 0.966 0.982 0.958 0.896 0.896 CHORD Protein [Source:RefSeq peptide;Acc:NP_491519]
98. F38B7.5 duo-1 3087 7.479 0.872 0.957 0.964 0.957 0.955 0.967 0.914 0.893 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_505931]
99. C26B2.6 elpc-4 3600 7.478 0.907 0.964 0.915 0.964 0.936 0.914 0.938 0.940 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
100. C18G1.5 hil-4 21692 7.478 0.902 0.962 0.912 0.962 0.958 0.972 0.938 0.872 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]

There are 2407 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA