C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R08D7.4

Gene ID Gene Name Reads Transcripts Annotation
R08D7.4 R08D7.4 1958 R08D7.4a.1, R08D7.4a.2, R08D7.4b.1, R08D7.4b.2

Genes with expression patterns similar to R08D7.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R08D7.4 R08D7.4 1958 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. Y55F3AM.12 dcap-1 8679 7.539 0.914 0.939 0.965 0.939 0.938 0.921 0.952 0.971 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
3. C41C4.6 ulp-4 13338 7.485 0.879 0.928 0.973 0.928 0.961 0.919 0.962 0.935 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
4. Y41D4B.19 npp-8 12992 7.485 0.886 0.940 0.963 0.940 0.917 0.941 0.945 0.953 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
5. C23G10.8 C23G10.8 4642 7.485 0.868 0.957 0.940 0.957 0.956 0.951 0.950 0.906
6. F26H9.1 prom-1 6444 7.482 0.930 0.940 0.948 0.940 0.970 0.931 0.971 0.852 PRogression Of Meiosis [Source:RefSeq peptide;Acc:NP_492477]
7. C17G10.2 C17G10.2 2288 7.482 0.918 0.923 0.967 0.923 0.968 0.931 0.933 0.919
8. Y71G12B.9 lin-65 7476 7.47 0.877 0.946 0.969 0.946 0.917 0.915 0.955 0.945 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
9. F53A2.4 nud-1 7818 7.459 0.925 0.964 0.956 0.964 0.943 0.911 0.937 0.859 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
10. ZC410.2 mppb-1 3991 7.459 0.956 0.944 0.909 0.944 0.893 0.916 0.954 0.943 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
11. C26E6.7 eri-9 8069 7.453 0.886 0.926 0.966 0.926 0.946 0.941 0.930 0.932 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
12. R06A4.4 imb-2 10302 7.449 0.911 0.918 0.938 0.918 0.933 0.951 0.946 0.934 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
13. Y38C9A.2 cgp-1 11756 7.448 0.915 0.920 0.948 0.920 0.961 0.957 0.938 0.889 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
14. T23G11.3 gld-1 41748 7.448 0.881 0.938 0.958 0.938 0.976 0.897 0.959 0.901 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
15. B0414.5 cpb-3 11584 7.443 0.930 0.949 0.948 0.949 0.955 0.929 0.938 0.845 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
16. F46F11.2 cey-2 47143 7.442 0.896 0.936 0.952 0.936 0.980 0.922 0.956 0.864 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
17. C02F5.4 cids-1 3125 7.439 0.875 0.919 0.958 0.919 0.966 0.917 0.952 0.933 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
18. F08G5.1 dsb-1 2436 7.435 0.888 0.953 0.939 0.953 0.978 0.905 0.913 0.906 Double-Strand Break factor [Source:RefSeq peptide;Acc:NP_001255642]
19. F52F12.4 lsl-1 4055 7.429 0.876 0.953 0.961 0.953 0.937 0.912 0.926 0.911 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
20. C18E9.3 szy-20 6819 7.423 0.914 0.946 0.963 0.946 0.918 0.945 0.938 0.853 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
21. ZK418.8 tofu-7 2450 7.418 0.919 0.939 0.955 0.939 0.946 0.900 0.960 0.860 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_498547]
22. W01A8.5 tofu-5 5678 7.416 0.907 0.931 0.956 0.931 0.947 0.911 0.941 0.892 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
23. K08F4.2 gtbp-1 25222 7.415 0.882 0.958 0.928 0.958 0.874 0.910 0.949 0.956 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
24. T28D9.10 snr-3 9995 7.414 0.917 0.937 0.906 0.937 0.882 0.921 0.959 0.955 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
25. T25G3.4 T25G3.4 9394 7.412 0.883 0.941 0.941 0.941 0.896 0.905 0.961 0.944 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
26. C06G3.2 klp-18 4885 7.408 0.928 0.940 0.951 0.940 0.916 0.886 0.964 0.883 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_501093]
27. C17H12.13 anat-1 12995 7.403 0.922 0.949 0.963 0.949 0.952 0.884 0.912 0.872 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
28. M01E11.5 cey-3 20931 7.402 0.926 0.917 0.964 0.917 0.971 0.908 0.940 0.859 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
29. F59A2.1 npp-9 34375 7.401 0.885 0.931 0.959 0.931 0.906 0.916 0.959 0.914 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
30. ZK1128.6 ttll-4 6059 7.4 0.829 0.957 0.929 0.957 0.936 0.893 0.955 0.944 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
31. C07H6.5 cgh-1 60576 7.399 0.839 0.898 0.968 0.898 0.969 0.945 0.948 0.934 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
32. F58B3.5 mars-1 6729 7.396 0.904 0.933 0.920 0.933 0.898 0.910 0.964 0.934 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
33. JC8.6 lin-54 5789 7.396 0.877 0.910 0.965 0.910 0.935 0.920 0.967 0.912
34. Y37D8A.9 mrg-1 14369 7.391 0.888 0.935 0.926 0.935 0.918 0.897 0.964 0.928 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
35. Y14H12B.2 Y14H12B.2 6496 7.39 0.882 0.928 0.964 0.928 0.946 0.883 0.965 0.894
36. Y116A8C.42 snr-1 17062 7.389 0.891 0.943 0.949 0.943 0.907 0.873 0.951 0.932 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
37. Y71F9B.4 snr-7 13542 7.389 0.905 0.958 0.906 0.958 0.922 0.925 0.917 0.898 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
38. C25A1.4 C25A1.4 15507 7.388 0.940 0.931 0.956 0.931 0.907 0.907 0.919 0.897
39. F45E12.2 brf-1 4667 7.387 0.879 0.930 0.943 0.930 0.929 0.927 0.966 0.883 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
40. F41H10.10 htp-1 6425 7.384 0.861 0.951 0.916 0.951 0.973 0.919 0.962 0.851 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
41. F21C3.4 rde-2 6286 7.381 0.874 0.937 0.963 0.937 0.901 0.901 0.953 0.915
42. ZK1010.3 frg-1 3533 7.381 0.904 0.916 0.952 0.916 0.870 0.953 0.960 0.910 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
43. Y39E4B.2 snpc-1.2 5800 7.38 0.855 0.951 0.932 0.951 0.946 0.905 0.940 0.900 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
44. F54D5.11 F54D5.11 2756 7.38 0.921 0.928 0.928 0.928 0.969 0.920 0.945 0.841 Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
45. C43E11.4 tufm-2 3038 7.375 0.880 0.939 0.877 0.939 0.928 0.921 0.936 0.955 TU elongation Factor (EF-Tu), Mitochondrial [Source:RefSeq peptide;Acc:NP_491338]
46. Y57A10A.25 parn-2 2634 7.373 0.887 0.953 0.937 0.953 0.960 0.906 0.942 0.835 PARN (Poly(A)-specific RiboNuclease) homolog [Source:RefSeq peptide;Acc:NP_496602]
47. R03D7.7 nos-1 8407 7.373 0.914 0.909 0.904 0.909 0.977 0.948 0.922 0.890 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
48. F58A4.4 pri-1 1493 7.371 0.895 0.906 0.927 0.906 0.936 0.925 0.960 0.916 DNA primase small subunit [Source:UniProtKB/Swiss-Prot;Acc:P34471]
49. F40F8.9 lsm-1 5917 7.37 0.951 0.864 0.948 0.864 0.948 0.942 0.959 0.894 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_496385]
50. R74.8 R74.8 7722 7.37 0.915 0.935 0.951 0.935 0.898 0.898 0.951 0.887
51. C05D2.5 xnd-1 5516 7.368 0.840 0.967 0.944 0.967 0.958 0.944 0.945 0.803 X chromosome NonDisjunction factor [Source:RefSeq peptide;Acc:NP_498207]
52. T05H4.11 T05H4.11 12835 7.368 0.882 0.922 0.953 0.922 0.927 0.913 0.928 0.921
53. Y50D7A.9 taco-1 5949 7.366 0.928 0.961 0.887 0.961 0.859 0.922 0.935 0.913 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
54. F55A12.5 F55A12.5 6612 7.364 0.937 0.935 0.869 0.935 0.944 0.875 0.971 0.898
55. F21D5.6 F21D5.6 1798 7.363 0.936 0.910 0.964 0.910 0.929 0.932 0.932 0.850
56. Y23H5B.6 Y23H5B.6 5886 7.363 0.895 0.958 0.947 0.958 0.884 0.892 0.923 0.906
57. T22C1.3 T22C1.3 2305 7.359 0.926 0.903 0.962 0.903 0.910 0.940 0.892 0.923
58. Y66D12A.8 Y66D12A.8 3949 7.359 0.863 0.950 0.950 0.950 0.864 0.926 0.916 0.940
59. F58E10.3 ddx-17 15107 7.358 0.902 0.968 0.956 0.968 0.805 0.900 0.912 0.947 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
60. C17G10.4 cdc-14 6262 7.355 0.925 0.924 0.960 0.924 0.870 0.909 0.937 0.906 Probable tyrosine-protein phosphatase cdc-14 [Source:UniProtKB/Swiss-Prot;Acc:P81299]
61. F10E9.7 F10E9.7 1842 7.354 0.892 0.899 0.971 0.899 0.880 0.946 0.922 0.945
62. Y18D10A.17 car-1 87364 7.352 0.914 0.926 0.956 0.926 0.954 0.883 0.927 0.866 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
63. D1007.8 D1007.8 1265 7.35 0.881 0.920 0.950 0.920 0.956 0.937 0.959 0.827
64. ZK616.5 ZK616.5 10527 7.349 0.896 0.943 0.955 0.943 0.855 0.922 0.905 0.930
65. F44E2.8 F44E2.8 12814 7.349 0.874 0.942 0.930 0.942 0.940 0.962 0.924 0.835
66. W08E3.1 snr-2 14849 7.349 0.913 0.934 0.952 0.934 0.910 0.885 0.935 0.886 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
67. W06E11.4 sbds-1 6701 7.347 0.885 0.930 0.963 0.930 0.930 0.936 0.906 0.867 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
68. H20J04.8 mog-2 3084 7.346 0.908 0.918 0.960 0.918 0.944 0.930 0.870 0.898 Probable U2 small nuclear ribonucleoprotein A' [Source:UniProtKB/Swiss-Prot;Acc:Q9BLB6]
69. R12C12.2 ran-5 14517 7.345 0.918 0.923 0.967 0.923 0.848 0.920 0.930 0.916 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
70. C30H7.2 C30H7.2 14364 7.344 0.738 0.939 0.952 0.939 0.976 0.911 0.970 0.919
71. Y41D4B.12 set-23 2590 7.343 0.930 0.891 0.962 0.891 0.953 0.925 0.860 0.931 Probable histone-lysine N-methyltransferase set-23 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y12]
72. F09G2.9 attf-2 14771 7.343 0.900 0.930 0.963 0.930 0.901 0.931 0.909 0.879 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
73. F01F1.7 ddx-23 4217 7.342 0.844 0.943 0.906 0.943 0.917 0.911 0.914 0.964 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_498260]
74. F48E8.3 F48E8.3 4186 7.341 0.904 0.887 0.965 0.887 0.888 0.947 0.918 0.945
75. T25G3.3 T25G3.3 7285 7.341 0.916 0.963 0.919 0.963 0.831 0.934 0.887 0.928
76. Y47D3A.26 smc-3 6256 7.341 0.841 0.942 0.958 0.942 0.936 0.906 0.920 0.896 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
77. Y57E12AL.5 mdt-6 3828 7.341 0.925 0.886 0.962 0.886 0.862 0.939 0.943 0.938 Mediator of RNA polymerase II transcription subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N337]
78. T10G3.6 gut-2 3374 7.34 0.924 0.908 0.966 0.908 0.942 0.865 0.956 0.871
79. W06H3.2 pus-1 1382 7.339 0.813 0.959 0.912 0.959 0.920 0.903 0.942 0.931 tRNA pseudouridine synthase [Source:RefSeq peptide;Acc:NP_507242]
80. T07D4.4 ddx-19 7234 7.337 0.850 0.950 0.915 0.950 0.905 0.904 0.940 0.923 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
81. C01F6.8 icln-1 6586 7.336 0.919 0.920 0.922 0.920 0.921 0.913 0.962 0.859 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
82. C56A3.5 C56A3.5 2260 7.336 0.888 0.920 0.940 0.920 0.960 0.973 0.934 0.801
83. B0035.12 sart-3 7188 7.335 0.871 0.954 0.967 0.954 0.928 0.908 0.944 0.809 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
84. K07A1.12 lin-53 15817 7.335 0.877 0.928 0.954 0.928 0.922 0.870 0.950 0.906 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
85. F56F3.1 ifet-1 25772 7.335 0.930 0.947 0.958 0.947 0.864 0.874 0.896 0.919 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
86. T24D1.5 har-2 2882 7.334 0.894 0.874 0.943 0.874 0.955 0.933 0.927 0.934
87. Y41D4B.13 ced-2 10100 7.334 0.898 0.905 0.948 0.905 0.906 0.926 0.950 0.896 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
88. T19C3.8 fem-2 9225 7.334 0.918 0.924 0.950 0.924 0.886 0.914 0.918 0.900 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
89. F52C9.7 mog-3 9880 7.332 0.887 0.906 0.946 0.906 0.909 0.941 0.885 0.952 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
90. R05D3.4 rfp-1 3613 7.331 0.891 0.943 0.938 0.943 0.975 0.912 0.911 0.818 E3 ubiquitin-protein ligase bre-1 [Source:UniProtKB/Swiss-Prot;Acc:P34537]
91. Y73B6BL.32 lsm-8 11002 7.33 0.930 0.941 0.957 0.941 0.893 0.853 0.921 0.894 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
92. T19B4.2 npp-7 13073 7.33 0.912 0.925 0.935 0.925 0.811 0.923 0.951 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
93. D1046.1 cfim-2 4266 7.33 0.928 0.951 0.954 0.951 0.925 0.912 0.890 0.819 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_001255355]
94. C07E3.2 pro-2 4193 7.329 0.787 0.916 0.966 0.916 0.916 0.910 0.966 0.952 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
95. F43G6.9 patr-1 23000 7.327 0.871 0.923 0.950 0.923 0.913 0.891 0.948 0.908 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
96. F32E10.1 nol-10 3225 7.327 0.818 0.909 0.915 0.909 0.951 0.935 0.948 0.942 NucleOLar protein [Source:RefSeq peptide;Acc:NP_501233]
97. F23F1.1 nfyc-1 9983 7.327 0.904 0.929 0.964 0.929 0.892 0.880 0.906 0.923 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
98. K04G2.2 aho-3 15189 7.323 0.872 0.895 0.943 0.895 0.950 0.919 0.932 0.917
99. Y37D8A.11 cec-7 8801 7.322 0.876 0.939 0.949 0.939 0.892 0.872 0.955 0.900 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
100. F29C4.6 tut-1 5637 7.321 0.870 0.939 0.925 0.939 0.844 0.930 0.908 0.966 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]

There are 1068 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA