C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for D1046.1

Gene ID Gene Name Reads Transcripts Annotation
D1046.1 cfim-2 4266 D1046.1a.1, D1046.1a.2, D1046.1a.3, D1046.1b.1, D1046.1b.2, D1046.1b.3, D1046.1c.1, D1046.1c.2, D1046.1c.3, D1046.1e.1, D1046.1e.2, D1046.1e.3, D1046.1e.4, D1046.1e.5, D1046.1e.6 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_001255355]

Genes with expression patterns similar to D1046.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. D1046.1 cfim-2 4266 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_001255355]
2. R06A4.4 imb-2 10302 7.652 0.972 0.950 0.973 0.950 0.963 0.982 0.933 0.929 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
3. K07A1.12 lin-53 15817 7.651 0.973 0.965 0.975 0.965 0.937 0.966 0.921 0.949 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
4. R07E5.14 rnp-4 11659 7.621 0.983 0.968 0.948 0.968 0.951 0.979 0.930 0.894 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
5. F43G6.9 patr-1 23000 7.592 0.948 0.960 0.974 0.960 0.942 0.975 0.928 0.905 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
6. Y53C10A.12 hsf-1 7899 7.592 0.967 0.981 0.962 0.981 0.915 0.955 0.930 0.901 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
7. F43G9.5 cfim-1 9169 7.591 0.974 0.954 0.974 0.954 0.966 0.963 0.916 0.890 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
8. T05C12.7 cct-1 41264 7.591 0.971 0.958 0.950 0.958 0.933 0.968 0.904 0.949 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
9. K04G2.2 aho-3 15189 7.582 0.973 0.954 0.968 0.954 0.948 0.973 0.942 0.870
10. W06E11.4 sbds-1 6701 7.579 0.948 0.947 0.955 0.947 0.963 0.968 0.936 0.915 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
11. K08E7.1 eak-7 18960 7.578 0.983 0.958 0.970 0.958 0.913 0.972 0.923 0.901 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
12. ZK863.6 dpy-30 16177 7.576 0.973 0.942 0.948 0.942 0.939 0.980 0.954 0.898 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
13. F01F1.8 cct-6 29460 7.57 0.963 0.931 0.946 0.931 0.945 0.973 0.924 0.957 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
14. F09G2.9 attf-2 14771 7.568 0.969 0.954 0.970 0.954 0.918 0.974 0.892 0.937 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
15. C52E4.3 snr-4 19308 7.557 0.944 0.944 0.943 0.944 0.928 0.982 0.929 0.943 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
16. F21C3.4 rde-2 6286 7.557 0.900 0.960 0.961 0.960 0.936 0.965 0.930 0.945
17. Y43F4B.3 set-25 8036 7.552 0.949 0.950 0.968 0.950 0.921 0.979 0.910 0.925 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
18. C01G8.3 dhs-1 5394 7.545 0.934 0.983 0.952 0.983 0.951 0.959 0.921 0.862 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_491557]
19. F26F4.7 nhl-2 13541 7.545 0.947 0.966 0.965 0.966 0.933 0.933 0.919 0.916 NHL (ring finger b-box coiled coil) domain containing [Source:RefSeq peptide;Acc:NP_498026]
20. Y37D8A.9 mrg-1 14369 7.539 0.976 0.963 0.960 0.963 0.941 0.957 0.912 0.867 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
21. T24H10.3 dnj-23 11446 7.537 0.975 0.943 0.962 0.943 0.922 0.973 0.908 0.911 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
22. Y41D4B.13 ced-2 10100 7.535 0.982 0.944 0.977 0.944 0.937 0.963 0.933 0.855 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
23. C18E9.3 szy-20 6819 7.533 0.947 0.968 0.982 0.968 0.940 0.964 0.937 0.827 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
24. Y55F3AM.12 dcap-1 8679 7.528 0.973 0.964 0.981 0.964 0.963 0.969 0.899 0.815 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
25. C26E6.7 eri-9 8069 7.524 0.971 0.967 0.962 0.967 0.960 0.955 0.906 0.836 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
26. Y62E10A.12 lsm-3 4322 7.519 0.968 0.931 0.934 0.931 0.939 0.970 0.909 0.937 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
27. C55A6.2 ttll-5 5158 7.518 0.924 0.964 0.938 0.964 0.930 0.981 0.917 0.900 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
28. C36A4.5 maph-1.3 15493 7.514 0.961 0.937 0.975 0.937 0.962 0.954 0.913 0.875 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
29. T20D3.7 vps-26 9349 7.513 0.980 0.970 0.988 0.970 0.934 0.920 0.934 0.817 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
30. T19C3.8 fem-2 9225 7.512 0.968 0.955 0.976 0.955 0.939 0.955 0.943 0.821 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
31. F58G11.6 ccz-1 5655 7.511 0.971 0.977 0.977 0.977 0.938 0.907 0.896 0.868
32. K07D4.3 rpn-11 8834 7.51 0.973 0.929 0.966 0.929 0.946 0.966 0.917 0.884 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
33. Y62E10A.11 mdt-9 5971 7.509 0.944 0.948 0.945 0.948 0.939 0.976 0.933 0.876 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
34. Y38C9A.2 cgp-1 11756 7.509 0.957 0.945 0.973 0.945 0.947 0.952 0.917 0.873 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
35. Y41C4A.10 elb-1 9743 7.507 0.981 0.940 0.960 0.940 0.951 0.940 0.930 0.865 ELongin B [Source:RefSeq peptide;Acc:NP_499517]
36. W01A8.5 tofu-5 5678 7.507 0.970 0.959 0.962 0.959 0.955 0.927 0.920 0.855 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
37. T14G10.6 tsp-12 10308 7.505 0.968 0.950 0.968 0.950 0.950 0.941 0.893 0.885 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
38. C17G10.4 cdc-14 6262 7.505 0.970 0.957 0.967 0.957 0.942 0.965 0.885 0.862 Probable tyrosine-protein phosphatase cdc-14 [Source:UniProtKB/Swiss-Prot;Acc:P81299]
39. ZK973.11 ZK973.11 2422 7.504 0.972 0.971 0.961 0.971 0.927 0.980 0.883 0.839
40. CC4.3 smu-1 4169 7.504 0.981 0.963 0.959 0.963 0.936 0.948 0.931 0.823 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
41. F59E12.11 sam-4 8179 7.501 0.978 0.948 0.971 0.948 0.925 0.971 0.916 0.844
42. Y71F9B.4 snr-7 13542 7.501 0.921 0.938 0.903 0.938 0.956 0.983 0.946 0.916 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
43. T26E3.3 par-6 8650 7.501 0.975 0.951 0.966 0.951 0.922 0.959 0.901 0.876 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
44. ZK742.1 xpo-1 20741 7.5 0.969 0.942 0.967 0.942 0.921 0.950 0.937 0.872 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
45. C01F6.8 icln-1 6586 7.5 0.939 0.938 0.954 0.938 0.932 0.971 0.923 0.905 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
46. K11H3.6 mrpl-36 7328 7.499 0.942 0.954 0.934 0.954 0.936 0.964 0.936 0.879 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
47. K11D12.2 pqn-51 15951 7.498 0.970 0.971 0.969 0.971 0.903 0.952 0.871 0.891 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
48. W07A8.3 dnj-25 5970 7.498 0.954 0.971 0.964 0.971 0.935 0.933 0.918 0.852 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001256947]
49. F58E10.3 ddx-17 15107 7.498 0.967 0.955 0.968 0.955 0.886 0.971 0.937 0.859 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
50. T21B10.7 cct-2 13999 7.497 0.960 0.914 0.932 0.914 0.948 0.983 0.916 0.930 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
51. ZK1128.6 ttll-4 6059 7.495 0.943 0.963 0.962 0.963 0.952 0.943 0.862 0.907 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
52. T24F1.1 raga-1 16171 7.494 0.968 0.956 0.956 0.956 0.912 0.966 0.927 0.853 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
53. F57B9.7 flap-1 5377 7.492 0.972 0.964 0.980 0.964 0.945 0.949 0.875 0.843 FLi1-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_741207]
54. ZC410.2 mppb-1 3991 7.49 0.959 0.950 0.877 0.950 0.951 0.961 0.939 0.903 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
55. T21B10.1 mrpl-50 14595 7.489 0.938 0.938 0.934 0.938 0.940 0.984 0.910 0.907 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
56. F44G4.4 tdp-1 3335 7.489 0.973 0.959 0.943 0.959 0.945 0.963 0.919 0.828 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
57. ZK1010.3 frg-1 3533 7.487 0.977 0.963 0.976 0.963 0.923 0.955 0.886 0.844 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
58. C17H12.13 anat-1 12995 7.486 0.962 0.956 0.983 0.956 0.962 0.929 0.903 0.835 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
59. D2092.5 maco-1 7931 7.483 0.975 0.967 0.945 0.967 0.962 0.845 0.905 0.917 MACOilin homolog [Source:RefSeq peptide;Acc:NP_491902]
60. W08E3.1 snr-2 14849 7.482 0.975 0.925 0.940 0.925 0.936 0.943 0.932 0.906 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
61. C53A5.3 hda-1 18413 7.48 0.976 0.963 0.962 0.963 0.918 0.941 0.915 0.842 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
62. Y41D4B.19 npp-8 12992 7.479 0.969 0.956 0.975 0.956 0.941 0.959 0.935 0.788 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
63. T10B5.5 cct-7 24616 7.477 0.930 0.922 0.926 0.922 0.924 0.975 0.950 0.928 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
64. C14A4.5 crn-5 1759 7.477 0.898 0.952 0.943 0.952 0.917 0.943 0.956 0.916 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
65. T10G3.6 gut-2 3374 7.476 0.947 0.937 0.970 0.937 0.935 0.937 0.912 0.901
66. Y105E8A.22 exc-4 6168 7.475 0.959 0.953 0.957 0.953 0.941 0.936 0.927 0.849 Chloride intracellular channel exc-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8WQA4]
67. Y106G6A.5 dsbn-1 7130 7.474 0.964 0.946 0.967 0.946 0.964 0.921 0.922 0.844 Dysbindin protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XWQ1]
68. Y53C12B.3 nos-3 20231 7.473 0.925 0.957 0.962 0.957 0.937 0.942 0.925 0.868 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
69. R06C1.2 fdps-1 4504 7.473 0.959 0.973 0.937 0.973 0.898 0.934 0.932 0.867 Farnesyl DiPhosphate Synthetase [Source:RefSeq peptide;Acc:NP_493027]
70. ZK1058.4 ccdc-47 8879 7.473 0.975 0.932 0.949 0.932 0.909 0.973 0.886 0.917 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
71. Y43F4B.4 npp-18 4780 7.473 0.971 0.971 0.952 0.971 0.941 0.948 0.921 0.798 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
72. C43E11.10 cdc-6 5331 7.468 0.955 0.965 0.962 0.965 0.879 0.959 0.913 0.870 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
73. C34E10.2 gop-2 5684 7.465 0.969 0.944 0.956 0.944 0.926 0.942 0.940 0.844 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
74. F32A5.7 lsm-4 3785 7.465 0.984 0.945 0.941 0.945 0.915 0.963 0.906 0.866 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
75. Y54E5B.4 ubc-16 8386 7.462 0.979 0.949 0.956 0.949 0.930 0.944 0.889 0.866 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_493587]
76. K08F4.2 gtbp-1 25222 7.461 0.939 0.941 0.935 0.941 0.936 0.969 0.928 0.872 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
77. W02F12.6 sna-1 7338 7.461 0.973 0.949 0.971 0.949 0.919 0.937 0.894 0.869 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
78. C49H3.10 xpo-3 9101 7.46 0.919 0.922 0.959 0.922 0.914 0.955 0.941 0.928 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
79. F01F1.4 rabn-5 5269 7.46 0.964 0.977 0.925 0.977 0.913 0.978 0.880 0.846 RABaptiN (rab effector) [Source:RefSeq peptide;Acc:NP_498266]
80. T01C3.8 mut-15 4359 7.46 0.938 0.964 0.955 0.964 0.900 0.962 0.885 0.892 MUTator [Source:RefSeq peptide;Acc:NP_001256638]
81. T26A8.1 T26A8.1 4387 7.46 0.915 0.964 0.940 0.964 0.954 0.964 0.900 0.859
82. T22C1.3 T22C1.3 2305 7.459 0.981 0.958 0.975 0.958 0.960 0.922 0.882 0.823
83. F59A2.1 npp-9 34375 7.458 0.965 0.942 0.956 0.942 0.924 0.952 0.932 0.845 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
84. F39B2.1 hinf-1 10002 7.458 0.971 0.967 0.977 0.967 0.906 0.921 0.870 0.879 HIstone Nuclear Factor p (P) homolog [Source:RefSeq peptide;Acc:NP_493579]
85. K07C5.1 arx-2 20142 7.458 0.970 0.967 0.971 0.967 0.926 0.927 0.859 0.871 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
86. F53A2.4 nud-1 7818 7.458 0.941 0.957 0.943 0.957 0.957 0.950 0.918 0.835 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
87. Y14H12B.2 Y14H12B.2 6496 7.457 0.962 0.926 0.978 0.926 0.929 0.936 0.915 0.885
88. ZK1128.8 vps-29 5118 7.457 0.962 0.965 0.974 0.965 0.907 0.918 0.857 0.909 Vacuolar protein sorting-associated protein 29 [Source:RefSeq peptide;Acc:NP_001022987]
89. C08F8.1 pfd-1 10199 7.456 0.948 0.907 0.879 0.907 0.955 0.983 0.925 0.952 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
90. B0303.15 mrpl-11 9889 7.455 0.930 0.927 0.961 0.927 0.928 0.967 0.932 0.883 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
91. D1007.8 D1007.8 1265 7.454 0.936 0.965 0.981 0.965 0.943 0.971 0.864 0.829
92. Y40G12A.1 ubh-3 4142 7.453 0.933 0.928 0.928 0.928 0.927 0.971 0.918 0.920 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_504653]
93. F42A6.7 hrp-1 28201 7.453 0.980 0.930 0.967 0.930 0.893 0.942 0.907 0.904 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
94. C05C8.5 C05C8.5 2655 7.453 0.936 0.972 0.916 0.972 0.921 0.940 0.926 0.870
95. B0205.9 B0205.9 3651 7.453 0.942 0.962 0.942 0.962 0.927 0.947 0.934 0.837
96. C06A1.5 rpb-6 7515 7.451 0.958 0.922 0.946 0.922 0.950 0.939 0.910 0.904 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
97. T03F6.5 lis-1 8818 7.451 0.946 0.931 0.944 0.931 0.901 0.958 0.914 0.926 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
98. F33D4.7 emc-6 6534 7.45 0.965 0.945 0.976 0.945 0.905 0.953 0.869 0.892 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
99. B0285.1 cdk-12 5900 7.45 0.960 0.925 0.966 0.925 0.944 0.940 0.874 0.916 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
100. R12C12.2 ran-5 14517 7.45 0.978 0.966 0.970 0.966 0.904 0.942 0.901 0.823 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]

There are 2483 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA