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Results for E04A4.4

Gene ID Gene Name Reads Transcripts Annotation
E04A4.4 hoe-1 3659 E04A4.4a, E04A4.4b, E04A4.4c Ribonuclease Z [Source:UniProtKB/Swiss-Prot;Acc:O44476]

Genes with expression patterns similar to E04A4.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. E04A4.4 hoe-1 3659 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ribonuclease Z [Source:UniProtKB/Swiss-Prot;Acc:O44476]
2. C26D10.2 hel-1 28697 7.672 0.961 0.973 0.954 0.973 0.962 0.971 0.924 0.954 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
3. T24H7.1 phb-2 28775 7.611 0.953 0.963 0.946 0.963 0.980 0.967 0.900 0.939 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
4. T16G1.11 eif-3.K 14014 7.61 0.957 0.946 0.933 0.946 0.972 0.958 0.951 0.947 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
5. W02B12.3 rsp-1 9235 7.609 0.958 0.939 0.904 0.939 0.979 0.969 0.954 0.967 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
6. Y17G7A.1 hmg-12 29989 7.593 0.952 0.941 0.913 0.941 0.970 0.975 0.931 0.970 HMG [Source:RefSeq peptide;Acc:NP_496544]
7. C26E6.4 rpb-2 7053 7.588 0.934 0.964 0.905 0.964 0.978 0.950 0.962 0.931 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
8. T02G5.9 kars-1 9763 7.583 0.933 0.971 0.961 0.971 0.972 0.962 0.884 0.929 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
9. Y116A8C.42 snr-1 17062 7.582 0.969 0.950 0.907 0.950 0.960 0.959 0.913 0.974 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
10. F56D12.5 vig-1 42594 7.576 0.955 0.964 0.911 0.964 0.950 0.923 0.953 0.956 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
11. Y71H2AM.23 tufm-1 16206 7.574 0.928 0.963 0.921 0.963 0.977 0.940 0.951 0.931 TU elongation Factor (EF-Tu), Mitochondrial [Source:RefSeq peptide;Acc:NP_497623]
12. F55H2.6 clu-1 21404 7.574 0.944 0.952 0.930 0.952 0.964 0.938 0.929 0.965 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
13. F29C4.6 tut-1 5637 7.573 0.936 0.938 0.929 0.938 0.976 0.945 0.963 0.948 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
14. Y34D9A.1 mrpl-38 5291 7.57 0.948 0.947 0.901 0.947 0.956 0.958 0.948 0.965 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
15. K08F11.3 cif-1 10218 7.569 0.959 0.968 0.940 0.968 0.974 0.936 0.938 0.886 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
16. F28H1.3 aars-2 13537 7.568 0.945 0.957 0.890 0.957 0.974 0.949 0.937 0.959 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
17. C14A4.14 mrps-22 7966 7.567 0.931 0.965 0.951 0.965 0.948 0.913 0.960 0.934 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
18. H20J04.5 pfd-2 8082 7.567 0.963 0.956 0.959 0.956 0.971 0.927 0.951 0.884 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
19. T03D8.2 mrps-12 8253 7.565 0.923 0.946 0.960 0.946 0.974 0.968 0.901 0.947 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
20. F58B3.5 mars-1 6729 7.564 0.940 0.953 0.948 0.953 0.956 0.955 0.897 0.962 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
21. T21C9.12 scpl-4 14723 7.564 0.956 0.976 0.938 0.976 0.961 0.941 0.953 0.863 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
22. B0464.7 baf-1 10161 7.563 0.955 0.946 0.916 0.946 0.963 0.941 0.954 0.942 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
23. F29C12.4 gfm-1 8964 7.563 0.945 0.968 0.912 0.968 0.968 0.933 0.953 0.916 Elongation factor G, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XV52]
24. B0464.1 dars-1 12331 7.56 0.965 0.966 0.949 0.966 0.947 0.886 0.928 0.953 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
25. H19N07.1 erfa-3 19869 7.559 0.969 0.965 0.934 0.965 0.960 0.912 0.918 0.936 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
26. F22D6.3 nars-1 18624 7.558 0.951 0.945 0.940 0.945 0.957 0.955 0.913 0.952 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
27. Y18D10A.19 fkb-2 48128 7.558 0.959 0.964 0.931 0.964 0.971 0.892 0.949 0.928 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
28. F36A2.1 cids-2 4551 7.554 0.922 0.950 0.914 0.950 0.966 0.935 0.962 0.955 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
29. F22B5.9 fars-3 7209 7.552 0.956 0.948 0.915 0.948 0.971 0.935 0.931 0.948 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
30. T23H2.1 npp-12 12425 7.551 0.935 0.943 0.892 0.943 0.970 0.957 0.943 0.968 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
31. Y50D7A.9 taco-1 5949 7.551 0.944 0.950 0.933 0.950 0.949 0.957 0.925 0.943 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
32. W08E3.3 ola-1 20885 7.546 0.968 0.961 0.906 0.961 0.964 0.910 0.941 0.935 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
33. R13A5.12 lpd-7 10476 7.543 0.953 0.942 0.947 0.942 0.986 0.932 0.930 0.911 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
34. C28C12.9 acdh-13 4102 7.543 0.919 0.948 0.910 0.948 0.941 0.942 0.958 0.977 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_501452]
35. Y80D3A.2 emb-4 3717 7.543 0.914 0.966 0.881 0.966 0.936 0.975 0.962 0.943
36. C33H5.12 rsp-6 23342 7.542 0.929 0.953 0.889 0.953 0.962 0.959 0.953 0.944 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
37. F58D5.1 hrp-2 17211 7.541 0.953 0.963 0.904 0.963 0.948 0.931 0.937 0.942 human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
38. C18E9.6 tomm-40 13426 7.539 0.957 0.959 0.891 0.959 0.971 0.960 0.927 0.915 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
39. T01E8.6 mrps-14 9328 7.536 0.947 0.965 0.929 0.965 0.948 0.940 0.931 0.911 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
40. F56D2.6 ddx-15 12282 7.535 0.921 0.955 0.883 0.955 0.971 0.945 0.972 0.933 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
41. C27H5.3 fust-1 6978 7.534 0.957 0.951 0.954 0.951 0.977 0.954 0.883 0.907 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
42. C06A1.5 rpb-6 7515 7.533 0.948 0.969 0.955 0.969 0.960 0.964 0.927 0.841 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
43. T13H5.5 mrps-18B 3430 7.532 0.958 0.963 0.932 0.963 0.940 0.948 0.908 0.920 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
44. Y37E3.15 npp-13 7250 7.532 0.927 0.938 0.938 0.938 0.961 0.936 0.946 0.948 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
45. Y38A8.3 ulp-2 7403 7.531 0.932 0.930 0.907 0.930 0.966 0.950 0.937 0.979 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
46. R13F6.10 cra-1 11610 7.527 0.948 0.939 0.927 0.939 0.960 0.937 0.933 0.944 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
47. F56B3.8 mrpl-2 3195 7.526 0.942 0.958 0.916 0.958 0.963 0.967 0.906 0.916 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499987]
48. Y37D8A.11 cec-7 8801 7.521 0.942 0.949 0.918 0.949 0.980 0.925 0.902 0.956 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
49. F23F1.1 nfyc-1 9983 7.52 0.943 0.927 0.893 0.927 0.962 0.947 0.948 0.973 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
50. ZK550.4 ZK550.4 5815 7.518 0.946 0.930 0.914 0.930 0.959 0.947 0.941 0.951 TFIIE-alpha protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG49]
51. T21G5.3 glh-1 16470 7.517 0.912 0.948 0.937 0.948 0.976 0.924 0.945 0.927 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
52. W06H3.3 ctps-1 8363 7.516 0.961 0.962 0.912 0.962 0.940 0.949 0.926 0.904 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
53. T17E9.2 nmt-1 8017 7.515 0.947 0.962 0.925 0.962 0.933 0.963 0.913 0.910 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
54. Y23H5B.6 Y23H5B.6 5886 7.515 0.955 0.962 0.897 0.962 0.964 0.926 0.932 0.917
55. C34E10.11 mrps-26 4649 7.514 0.915 0.974 0.946 0.974 0.960 0.951 0.879 0.915 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498113]
56. C08B11.5 sap-49 10553 7.513 0.944 0.944 0.923 0.944 0.957 0.962 0.932 0.907 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
57. C34E10.5 prmt-5 12277 7.512 0.948 0.976 0.920 0.976 0.940 0.926 0.929 0.897 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
58. T06A10.4 lsy-13 7631 7.512 0.957 0.935 0.901 0.935 0.947 0.960 0.914 0.963
59. T10F2.4 prp-19 11298 7.51 0.945 0.963 0.932 0.963 0.950 0.935 0.911 0.911 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
60. Y46G5A.4 snrp-200 13827 7.509 0.909 0.942 0.886 0.942 0.975 0.932 0.957 0.966 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
61. ZK1058.4 ccdc-47 8879 7.506 0.930 0.964 0.912 0.964 0.955 0.933 0.932 0.916 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
62. T22D1.10 ruvb-2 6505 7.502 0.933 0.953 0.900 0.953 0.970 0.905 0.948 0.940 RuvB-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH2]
63. C15H11.9 rrbs-1 9177 7.5 0.929 0.963 0.936 0.963 0.957 0.925 0.934 0.893 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
64. Y110A7A.19 let-630 3830 7.5 0.920 0.919 0.924 0.919 0.969 0.920 0.957 0.972
65. C48B4.11 C48B4.11 4384 7.499 0.942 0.941 0.871 0.941 0.981 0.966 0.941 0.916
66. T28D9.2 rsp-5 6460 7.499 0.936 0.954 0.865 0.954 0.962 0.929 0.943 0.956 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
67. K01G5.4 ran-1 32379 7.499 0.933 0.935 0.907 0.935 0.977 0.940 0.918 0.954 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
68. F13G3.11 mrpl-13 6024 7.498 0.919 0.958 0.934 0.958 0.940 0.936 0.920 0.933 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492067]
69. T28D9.10 snr-3 9995 7.498 0.962 0.948 0.942 0.948 0.962 0.930 0.866 0.940 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
70. ZK652.1 snr-5 5993 7.497 0.947 0.964 0.926 0.964 0.964 0.952 0.876 0.904 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
71. T04A8.11 mrpl-16 5998 7.495 0.952 0.924 0.872 0.924 0.975 0.931 0.977 0.940 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
72. K12C11.2 smo-1 12784 7.495 0.932 0.951 0.890 0.951 0.976 0.928 0.933 0.934 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
73. W01G7.3 rpb-11 7826 7.493 0.921 0.946 0.875 0.946 0.952 0.963 0.948 0.942 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
74. F58E10.3 ddx-17 15107 7.492 0.922 0.961 0.892 0.961 0.974 0.921 0.900 0.961 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
75. F32E10.6 cec-5 10643 7.492 0.941 0.948 0.864 0.948 0.944 0.923 0.967 0.957 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
76. C05D11.10 mrps-17 4613 7.486 0.921 0.935 0.953 0.935 0.971 0.968 0.888 0.915 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
77. T08B2.9 fars-1 12650 7.486 0.946 0.956 0.910 0.956 0.946 0.915 0.931 0.926 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
78. ZK328.2 eftu-2 7040 7.485 0.922 0.940 0.882 0.940 0.975 0.926 0.976 0.924 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
79. B0261.4 mrpl-47 8210 7.484 0.953 0.944 0.924 0.944 0.959 0.934 0.927 0.899 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
80. F17C11.9 eef-1G 37911 7.484 0.957 0.954 0.958 0.954 0.964 0.877 0.954 0.866 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
81. F09F7.3 rpc-2 9751 7.483 0.947 0.957 0.912 0.957 0.954 0.916 0.914 0.926 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
82. F59A2.3 cri-3 15077 7.482 0.940 0.967 0.931 0.967 0.931 0.947 0.842 0.957 Conserved regulator of innate immunity protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21018]
83. Y37E3.9 phb-1 29211 7.482 0.949 0.966 0.938 0.966 0.954 0.924 0.895 0.890 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
84. Y71G12B.9 lin-65 7476 7.481 0.915 0.948 0.902 0.948 0.959 0.954 0.929 0.926 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
85. F20A1.9 tofu-2 3341 7.478 0.924 0.936 0.901 0.936 0.958 0.928 0.952 0.943 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_504786]
86. F53G2.7 mnat-1 10966 7.478 0.938 0.968 0.940 0.968 0.939 0.902 0.918 0.905 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
87. K08F4.2 gtbp-1 25222 7.478 0.959 0.973 0.917 0.973 0.966 0.898 0.866 0.926 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
88. Y65B4BL.2 deps-1 18277 7.475 0.875 0.940 0.868 0.940 0.966 0.968 0.942 0.976
89. C53D5.6 imb-3 28921 7.475 0.971 0.959 0.931 0.959 0.934 0.878 0.956 0.887 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
90. C14A4.4 crn-3 6558 7.471 0.919 0.952 0.896 0.952 0.918 0.926 0.963 0.945 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
91. F32H2.1 snpc-4 7581 7.471 0.956 0.934 0.873 0.934 0.973 0.937 0.961 0.903 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
92. Y54E5A.4 npp-4 6288 7.471 0.930 0.937 0.870 0.937 0.969 0.950 0.919 0.959 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
93. F33D4.8 mrps-24 2853 7.471 0.916 0.950 0.942 0.950 0.953 0.936 0.868 0.956 28S ribosomal protein S24, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q688C0]
94. ZC262.8 mrps-18A 3125 7.468 0.932 0.946 0.962 0.946 0.967 0.876 0.908 0.931 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_498835]
95. T12E12.2 cec-6 4758 7.467 0.903 0.936 0.908 0.936 0.958 0.970 0.895 0.961 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
96. T06D8.5 cox-15 3892 7.466 0.924 0.955 0.945 0.955 0.941 0.955 0.892 0.899 Cytochrome OXidase assembly protein [Source:RefSeq peptide;Acc:NP_496402]
97. Y73B6BL.32 lsm-8 11002 7.465 0.941 0.964 0.927 0.964 0.964 0.955 0.845 0.905 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
98. Y22D7AL.5 hsp-60 42542 7.465 0.949 0.936 0.890 0.936 0.966 0.936 0.954 0.898 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
99. F32A11.2 hpr-17 1130 7.464 0.885 0.949 0.860 0.949 0.959 0.955 0.931 0.976 Homolog of S. Pombe Rad [Source:RefSeq peptide;Acc:NP_496793]
100. Y65B4BR.5 icd-2 58321 7.463 0.957 0.940 0.931 0.940 0.934 0.920 0.943 0.898 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA