C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for C54G4.6

Gene ID Gene Name Reads Transcripts Annotation
C54G4.6 dod-18 1182 C54G4.6 Downstream Of DAF-16 (regulated by DAF-16) [Source:RefSeq peptide;Acc:NP_492205]

Genes with expression patterns similar to C54G4.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C54G4.6 dod-18 1182 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Downstream Of DAF-16 (regulated by DAF-16) [Source:RefSeq peptide;Acc:NP_492205]
2. F58G11.6 ccz-1 5655 7.31 0.879 0.928 0.872 0.928 0.922 0.953 0.910 0.918
3. F33D4.7 emc-6 6534 7.306 0.918 0.934 0.881 0.934 0.856 0.968 0.899 0.916 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
4. W03B1.4 sars-2 2356 7.284 0.897 0.952 0.870 0.952 0.907 0.939 0.886 0.881 Seryl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_500549]
5. B0205.9 B0205.9 3651 7.276 0.964 0.869 0.910 0.869 0.907 0.950 0.904 0.903
6. T08B2.9 fars-1 12650 7.264 0.933 0.925 0.903 0.925 0.869 0.952 0.891 0.866 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
7. C49H3.8 arp-11 1815 7.263 0.865 0.932 0.903 0.932 0.883 0.955 0.893 0.900 Actin-Related Proteins [Source:RefSeq peptide;Acc:NP_501314]
8. F01F1.8 cct-6 29460 7.26 0.912 0.918 0.895 0.918 0.914 0.963 0.899 0.841 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
9. T07D4.4 ddx-19 7234 7.257 0.915 0.858 0.927 0.858 0.955 0.957 0.905 0.882 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001254186]
10. Y55F3AR.3 cct-8 17979 7.238 0.926 0.888 0.905 0.888 0.944 0.951 0.894 0.842 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
11. K11D12.2 pqn-51 15951 7.235 0.914 0.891 0.865 0.891 0.902 0.956 0.913 0.903 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
12. R09B3.5 mag-1 7496 7.233 0.940 0.877 0.855 0.877 0.916 0.951 0.941 0.876 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
13. W04D2.5 mrps-11 5757 7.221 0.936 0.898 0.919 0.898 0.867 0.963 0.870 0.870 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
14. Y41D4B.19 npp-8 12992 7.215 0.888 0.872 0.902 0.872 0.948 0.950 0.929 0.854 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
15. Y71F9B.4 snr-7 13542 7.207 0.951 0.900 0.878 0.900 0.939 0.927 0.921 0.791 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
16. T20D3.8 T20D3.8 6782 7.207 0.954 0.896 0.902 0.896 0.834 0.923 0.925 0.877
17. T01E8.6 mrps-14 9328 7.206 0.937 0.905 0.922 0.905 0.863 0.956 0.913 0.805 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
18. T22C1.3 T22C1.3 2305 7.204 0.906 0.881 0.870 0.881 0.934 0.966 0.895 0.871
19. F22B5.9 fars-3 7209 7.2 0.918 0.892 0.928 0.892 0.854 0.958 0.890 0.868 Phenylalanine--tRNA ligase beta subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19713]
20. C28A5.1 C28A5.1 1076 7.19 0.930 0.893 0.864 0.893 0.935 0.954 0.894 0.827
21. F55F10.1 F55F10.1 9760 7.174 0.915 0.863 0.852 0.863 0.896 0.961 0.911 0.913 Midasin [Source:RefSeq peptide;Acc:NP_500551]
22. F44E2.7 F44E2.7 3610 7.164 0.902 0.883 0.870 0.883 0.860 0.956 0.895 0.915 Putative zinc finger protein F44E2.7 [Source:UniProtKB/Swiss-Prot;Acc:P34437]
23. C07H6.5 cgh-1 60576 7.161 0.878 0.881 0.828 0.881 0.958 0.938 0.915 0.882 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
24. T20D3.7 vps-26 9349 7.155 0.902 0.901 0.869 0.901 0.909 0.974 0.878 0.821 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
25. D2007.4 mrpl-18 2880 7.153 0.897 0.852 0.929 0.852 0.867 0.956 0.899 0.901 39S ribosomal protein L18, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34378]
26. T03F1.2 coq-4 3093 7.153 0.919 0.889 0.871 0.889 0.913 0.956 0.888 0.828 Ubiquinone biosynthesis protein coq-4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P91428]
27. T12G3.5 mrpl-51 5192 7.152 0.944 0.921 0.838 0.921 0.839 0.953 0.899 0.837 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
28. ZK686.2 ZK686.2 3064 7.149 0.871 0.953 0.792 0.953 0.936 0.923 0.839 0.882 Putative ATP-dependent RNA helicase ZK686.2 [Source:UniProtKB/Swiss-Prot;Acc:P34668]
29. B0303.15 mrpl-11 9889 7.145 0.914 0.902 0.890 0.902 0.891 0.952 0.906 0.788 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
30. C36A4.5 maph-1.3 15493 7.144 0.845 0.921 0.812 0.921 0.958 0.963 0.916 0.808 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
31. R74.7 R74.7 2689 7.143 0.871 0.928 0.883 0.928 0.855 0.970 0.821 0.887 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q22031]
32. Y38C9A.2 cgp-1 11756 7.14 0.850 0.870 0.875 0.870 0.941 0.964 0.875 0.895 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
33. R05D11.7 snrp-27 4159 7.139 0.869 0.891 0.817 0.891 0.925 0.949 0.953 0.844 Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
34. T24F1.1 raga-1 16171 7.138 0.908 0.874 0.850 0.874 0.919 0.950 0.885 0.878 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
35. C01F1.2 sco-1 3010 7.137 0.925 0.889 0.944 0.889 0.818 0.954 0.837 0.881 SCO (yeast Suppressor of Cytochrome Oxidase deficiency) homolog [Source:RefSeq peptide;Acc:NP_494755]
36. F32A5.7 lsm-4 3785 7.132 0.927 0.868 0.847 0.868 0.888 0.959 0.949 0.826 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
37. T19C3.8 fem-2 9225 7.13 0.850 0.881 0.879 0.881 0.919 0.951 0.856 0.913 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
38. Y57G11C.34 mrps-7 3450 7.123 0.952 0.876 0.886 0.876 0.873 0.944 0.871 0.845 28S ribosomal protein S7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Q11]
39. C14A4.10 taf-13 2719 7.112 0.906 0.892 0.898 0.892 0.842 0.955 0.935 0.792 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_496289]
40. Y53C12B.2 Y53C12B.2 6115 7.112 0.961 0.894 0.934 0.894 0.937 0.908 0.898 0.686 RNA-binding protein pno-1 [Source:UniProtKB/Swiss-Prot;Acc:O18216]
41. Y47D3A.26 smc-3 6256 7.111 0.849 0.878 0.869 0.878 0.933 0.951 0.920 0.833 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
42. C02B10.5 C02B10.5 9171 7.109 0.897 0.885 0.846 0.885 0.863 0.957 0.893 0.883
43. Y41D4B.13 ced-2 10100 7.098 0.856 0.895 0.840 0.895 0.938 0.974 0.887 0.813 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
44. Y18D10A.17 car-1 87364 7.097 0.904 0.856 0.855 0.856 0.957 0.943 0.875 0.851 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
45. D2030.8 D2030.8 2645 7.09 0.918 0.902 0.905 0.902 0.864 0.953 0.855 0.791
46. D2013.7 eif-3.F 21004 7.08 0.951 0.898 0.898 0.898 0.843 0.941 0.848 0.803 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
47. F54C4.1 mrpl-40 2843 7.074 0.861 0.875 0.868 0.875 0.856 0.958 0.920 0.861 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497138]
48. C01G8.3 dhs-1 5394 7.068 0.833 0.883 0.836 0.883 0.879 0.959 0.905 0.890 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_491557]
49. F28D1.10 gex-3 5286 7.067 0.847 0.885 0.879 0.885 0.937 0.967 0.869 0.798 Membrane-associated protein gex-3 [Source:UniProtKB/Swiss-Prot;Acc:P55163]
50. F09G2.9 attf-2 14771 7.066 0.896 0.892 0.841 0.892 0.923 0.951 0.894 0.777 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
51. T01B11.3 syx-4 1573 7.064 0.899 0.894 0.850 0.894 0.841 0.868 0.958 0.860 Putative syntaxin-4 [Source:UniProtKB/Swiss-Prot;Acc:P91409]
52. F33D4.8 mrps-24 2853 7.063 0.887 0.896 0.828 0.896 0.828 0.951 0.885 0.892 28S ribosomal protein S24, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q688C0]
53. T18H9.6 mdt-27 5418 7.059 0.880 0.907 0.864 0.907 0.889 0.953 0.885 0.774 MeDiaTor [Source:RefSeq peptide;Acc:NP_505386]
54. T26E3.3 par-6 8650 7.051 0.873 0.901 0.843 0.901 0.916 0.962 0.839 0.816 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
55. M04B2.4 M04B2.4 2849 7.039 0.802 0.905 0.862 0.905 0.863 0.953 0.857 0.892
56. D1007.8 D1007.8 1265 7.037 0.839 0.853 0.836 0.853 0.943 0.954 0.880 0.879
57. Y105E8A.22 exc-4 6168 7.031 0.916 0.912 0.845 0.912 0.914 0.970 0.878 0.684 Chloride intracellular channel exc-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8WQA4]
58. F09E5.8 F09E5.8 2025 7.024 0.899 0.866 0.880 0.866 0.821 0.905 0.833 0.954 Proline synthase co-transcribed bacterial homolog protein [Source:UniProtKB/Swiss-Prot;Acc:P52057]
59. Y38E10A.6 ceh-100 5505 7.024 0.841 0.955 0.781 0.955 0.934 0.906 0.827 0.825 C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]
60. K04G2.2 aho-3 15189 7.02 0.848 0.843 0.820 0.843 0.960 0.924 0.896 0.886
61. F28B12.3 vrk-1 7133 7.011 0.891 0.904 0.827 0.904 0.965 0.918 0.934 0.668 Serine/threonine-protein kinase VRK1 [Source:UniProtKB/Swiss-Prot;Acc:Q19848]
62. Y87G2A.10 vps-28 3403 7.011 0.897 0.876 0.857 0.876 0.834 0.957 0.871 0.843 Vacuolar protein sorting-associated protein 28 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NA26]
63. F39H2.2 sig-7 1819 7.008 0.912 0.916 0.856 0.916 0.781 0.965 0.839 0.823
64. Y66H1A.3 mrpl-55 4581 7 0.899 0.857 0.863 0.857 0.817 0.954 0.854 0.899 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499930]
65. Y47D3A.21 Y47D3A.21 6853 6.995 0.853 0.907 0.806 0.907 0.841 0.956 0.857 0.868 Density-regulated protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NAH4]
66. C35D10.6 C35D10.6 2770 6.995 0.898 0.874 0.820 0.874 0.845 0.979 0.860 0.845
67. C26D10.2 hel-1 28697 6.992 0.951 0.880 0.920 0.880 0.802 0.849 0.868 0.842 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
68. C38C10.5 rgr-1 4146 6.991 0.836 0.894 0.826 0.894 0.911 0.957 0.885 0.788 Mediator of RNA polymerase II transcription subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:Q03570]
69. F11A10.2 repo-1 2791 6.989 0.909 0.888 0.754 0.888 0.865 0.971 0.897 0.817 REversed POlarity in early embryos [Source:RefSeq peptide;Acc:NP_502290]
70. Y41D4B.12 set-23 2590 6.982 0.896 0.836 0.789 0.836 0.950 0.962 0.906 0.807 Probable histone-lysine N-methyltransferase set-23 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y12]
71. T19B4.4 dnj-21 4956 6.981 0.940 0.845 0.882 0.845 0.843 0.951 0.844 0.831 Mitochondrial import inner membrane translocase subunit TIM14 [Source:UniProtKB/Swiss-Prot;Acc:P91454]
72. F39B2.3 F39B2.3 856 6.969 0.876 0.826 0.824 0.826 0.905 0.980 0.901 0.831
73. F59G1.5 ptp-2 7879 6.968 0.864 0.864 0.876 0.864 0.938 0.956 0.787 0.819 Tyrosine-protein phosphatase non-receptor type [Source:RefSeq peptide;Acc:NP_001293512]
74. C01G10.8 C01G10.8 5587 6.968 0.880 0.870 0.830 0.870 0.829 0.953 0.866 0.870
75. Y48G10A.1 Y48G10A.1 1683 6.963 0.933 0.860 0.870 0.860 0.812 0.955 0.818 0.855
76. Y54G11A.10 lin-7 6552 6.959 0.919 0.903 0.881 0.903 0.766 0.966 0.861 0.760
77. Y73B6BL.18 smg-3 2772 6.949 0.896 0.950 0.884 0.950 0.847 0.792 0.783 0.847 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_500974]
78. F21D5.8 mrps-33 2788 6.948 0.894 0.842 0.899 0.842 0.804 0.954 0.862 0.851 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_501505]
79. Y62F5A.1 mdt-8 1838 6.947 0.870 0.888 0.844 0.888 0.950 0.926 0.806 0.775 Mediator of RNA polymerase II transcription subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9U1W2]
80. T24H10.3 dnj-23 11446 6.945 0.879 0.845 0.798 0.845 0.954 0.940 0.845 0.839 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
81. F57A10.3 haf-3 6896 6.936 0.834 0.859 0.867 0.859 0.841 0.968 0.858 0.850 HAlF transporter (PGP related) [Source:RefSeq peptide;Acc:NP_506927]
82. T14G10.6 tsp-12 10308 6.936 0.833 0.854 0.774 0.854 0.969 0.944 0.844 0.864 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
83. C48G7.3 rin-1 9029 6.934 0.852 0.884 0.846 0.884 0.929 0.954 0.768 0.817 RIN (Ras/Rab INteractor) homolog [Source:RefSeq peptide;Acc:NP_001263893]
84. F23B2.13 rpb-12 2738 6.902 0.951 0.817 0.778 0.817 0.898 0.924 0.907 0.810 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_001294129]
85. R10E11.3 usp-46 3909 6.893 0.831 0.865 0.837 0.865 0.932 0.968 0.889 0.706 Ubiquitin carboxyl-terminal hydrolase 46 [Source:UniProtKB/Swiss-Prot;Acc:P34547]
86. Y43F4B.3 set-25 8036 6.893 0.847 0.899 0.770 0.899 0.920 0.957 0.876 0.725 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
87. F40F8.9 lsm-1 5917 6.893 0.900 0.825 0.774 0.825 0.922 0.958 0.856 0.833 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_496385]
88. C25A1.13 mrpl-34 3170 6.892 0.958 0.783 0.912 0.783 0.840 0.937 0.896 0.783 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492686]
89. C16A11.3 C16A11.3 3250 6.877 0.898 0.863 0.793 0.863 0.933 0.951 0.853 0.723
90. ZK1290.4 nfi-1 5353 6.874 0.862 0.863 0.852 0.863 0.920 0.958 0.790 0.766 NFI (Nuclear Factor I) family [Source:RefSeq peptide;Acc:NP_001022505]
91. T22C1.6 T22C1.6 4918 6.868 0.823 0.866 0.743 0.866 0.892 0.951 0.826 0.901
92. Y48G1BL.2 atm-1 1833 6.868 0.738 0.816 0.857 0.816 0.952 0.917 0.908 0.864 Serine/threonine-protein kinase ATM [Source:UniProtKB/Swiss-Prot;Acc:Q9N3Q4]
93. F54E7.3 par-3 8773 6.851 0.751 0.852 0.805 0.852 0.871 0.957 0.870 0.893 Partitioning defective protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q17353]
94. T24D1.3 T24D1.3 5300 6.85 0.885 0.710 0.853 0.710 0.935 0.910 0.952 0.895
95. Y48G8AL.1 herc-1 3873 6.848 0.848 0.865 0.958 0.865 0.763 0.887 0.795 0.867 HECT and RCC domain E3 ubiquitin ligase [Source:RefSeq peptide;Acc:NP_001293432]
96. C25G4.3 C25G4.3 2325 6.847 0.924 0.820 0.920 0.820 0.902 0.954 0.854 0.653
97. F58G1.1 wago-4 17516 6.844 0.780 0.780 0.873 0.780 0.956 0.916 0.842 0.917 Piwi-like protein [Source:RefSeq peptide;Acc:NP_496751]
98. C43H8.2 mafr-1 5790 6.832 0.886 0.857 0.880 0.857 0.806 0.958 0.893 0.695 Repressor of RNA polymerase III transcription MAF1 [Source:RefSeq peptide;Acc:NP_492777]
99. Y110A7A.16 elpc-1 3641 6.828 0.804 0.841 0.859 0.841 0.957 0.866 0.866 0.794 Elongator complex protein 1 [Source:RefSeq peptide;Acc:NP_491524]
100. JC8.6 lin-54 5789 6.821 0.842 0.835 0.804 0.835 0.951 0.890 0.885 0.779

There are 66 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA