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Results for F28B12.3

Gene ID Gene Name Reads Transcripts Annotation
F28B12.3 vrk-1 7133 F28B12.3.1, F28B12.3.2 Serine/threonine-protein kinase VRK1 [Source:UniProtKB/Swiss-Prot;Acc:Q19848]

Genes with expression patterns similar to F28B12.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28B12.3 vrk-1 7133 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Serine/threonine-protein kinase VRK1 [Source:UniProtKB/Swiss-Prot;Acc:Q19848]
2. C48E7.3 lpd-2 10330 7.645 0.953 0.981 0.975 0.981 0.956 0.928 0.983 0.888 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
3. F55G1.8 plk-3 12036 7.638 0.986 0.967 0.976 0.967 0.965 0.946 0.962 0.869 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
4. Y71G12B.9 lin-65 7476 7.63 0.984 0.979 0.967 0.979 0.975 0.900 0.950 0.896 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
5. JC8.6 lin-54 5789 7.627 0.975 0.968 0.963 0.968 0.962 0.931 0.950 0.910
6. F56D1.7 daz-1 23684 7.615 0.963 0.961 0.981 0.961 0.952 0.954 0.941 0.902 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
7. F56F3.1 ifet-1 25772 7.608 0.920 0.982 0.958 0.982 0.977 0.913 0.966 0.910 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
8. Y37D8A.9 mrg-1 14369 7.602 0.982 0.976 0.977 0.976 0.955 0.878 0.951 0.907 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
9. Y47D3A.26 smc-3 6256 7.599 0.956 0.957 0.982 0.957 0.968 0.944 0.952 0.883 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
10. F14B4.3 rpoa-2 7549 7.597 0.940 0.966 0.961 0.966 0.976 0.917 0.941 0.930 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
11. Y43F4B.3 set-25 8036 7.594 0.970 0.978 0.978 0.978 0.960 0.918 0.914 0.898 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
12. Y53C12B.3 nos-3 20231 7.593 0.955 0.967 0.964 0.967 0.971 0.924 0.944 0.901 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
13. R06F6.1 cdl-1 14167 7.581 0.941 0.967 0.971 0.967 0.953 0.908 0.944 0.930 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
14. Y41D4B.19 npp-8 12992 7.58 0.985 0.976 0.975 0.976 0.966 0.909 0.957 0.836 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
15. R05D11.7 snrp-27 4159 7.58 0.971 0.966 0.968 0.966 0.972 0.928 0.909 0.900 Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
16. F26B1.3 ima-2 18826 7.567 0.973 0.945 0.982 0.945 0.961 0.890 0.957 0.914 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
17. B0414.3 hil-5 10816 7.566 0.967 0.936 0.966 0.936 0.950 0.900 0.970 0.941 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
18. C30G12.7 puf-8 5785 7.563 0.969 0.973 0.978 0.973 0.938 0.854 0.949 0.929 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
19. F18C5.2 wrn-1 3792 7.561 0.956 0.967 0.989 0.967 0.949 0.940 0.900 0.893 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
20. Y39E4B.2 snpc-1.2 5800 7.56 0.943 0.977 0.966 0.977 0.961 0.906 0.941 0.889 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
21. C02B10.2 snpn-1 5519 7.556 0.932 0.970 0.969 0.970 0.917 0.955 0.960 0.883 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
22. D2030.8 D2030.8 2645 7.55 0.930 0.981 0.959 0.981 0.922 0.931 0.924 0.922
23. ZC395.8 ztf-8 5521 7.547 0.972 0.976 0.981 0.976 0.918 0.938 0.916 0.870 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
24. Y41D4B.13 ced-2 10100 7.545 0.974 0.967 0.978 0.967 0.966 0.886 0.935 0.872 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
25. R10E11.4 sqv-3 5431 7.544 0.962 0.952 0.967 0.952 0.942 0.924 0.957 0.888 Probable galactosyltransferase sqv-3 [Source:UniProtKB/Swiss-Prot;Acc:P34548]
26. T09A5.8 cec-3 5813 7.544 0.957 0.958 0.953 0.958 0.954 0.920 0.920 0.924 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
27. Y39G10AL.3 cdk-7 3495 7.543 0.972 0.981 0.954 0.981 0.950 0.950 0.928 0.827 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
28. Y23H5B.6 Y23H5B.6 5886 7.542 0.949 0.950 0.950 0.950 0.959 0.934 0.933 0.917
29. R06A4.4 imb-2 10302 7.54 0.968 0.969 0.977 0.969 0.952 0.909 0.922 0.874 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
30. F23F1.1 nfyc-1 9983 7.536 0.980 0.966 0.982 0.966 0.967 0.916 0.931 0.828 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
31. W01A8.5 tofu-5 5678 7.535 0.960 0.975 0.966 0.975 0.943 0.878 0.936 0.902 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
32. ZK1320.12 taf-8 3558 7.535 0.964 0.952 0.956 0.952 0.963 0.957 0.912 0.879 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
33. F18A1.3 lir-1 2995 7.534 0.947 0.979 0.968 0.979 0.952 0.893 0.935 0.881 LIn-26 Related [Source:RefSeq peptide;Acc:NP_001022093]
34. C34D4.12 cyn-12 7363 7.534 0.925 0.977 0.960 0.977 0.953 0.930 0.918 0.894 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
35. C05C8.5 C05C8.5 2655 7.533 0.944 0.982 0.894 0.982 0.964 0.890 0.927 0.950
36. F10E9.7 F10E9.7 1842 7.532 0.964 0.944 0.958 0.944 0.964 0.927 0.936 0.895
37. Y14H12B.2 Y14H12B.2 6496 7.529 0.976 0.955 0.981 0.955 0.946 0.862 0.934 0.920
38. R07E5.14 rnp-4 11659 7.529 0.960 0.976 0.976 0.976 0.944 0.873 0.940 0.884 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
39. R119.7 rnp-8 5640 7.529 0.965 0.942 0.966 0.942 0.981 0.944 0.896 0.893 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_001293232]
40. ZK1128.6 ttll-4 6059 7.529 0.960 0.969 0.967 0.969 0.966 0.883 0.935 0.880 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
41. F59A2.1 npp-9 34375 7.527 0.986 0.946 0.966 0.946 0.970 0.895 0.955 0.863 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
42. C09H6.3 mau-2 3280 7.527 0.967 0.962 0.949 0.962 0.957 0.926 0.933 0.871 Maternal uncoordinated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O17581]
43. T19B4.2 npp-7 13073 7.527 0.957 0.973 0.972 0.973 0.943 0.914 0.953 0.842 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
44. T20B12.2 tbp-1 9014 7.526 0.954 0.952 0.984 0.952 0.897 0.940 0.928 0.919 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
45. F21C3.4 rde-2 6286 7.526 0.931 0.969 0.956 0.969 0.968 0.904 0.943 0.886
46. B0035.12 sart-3 7188 7.525 0.966 0.965 0.954 0.965 0.964 0.916 0.952 0.843 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
47. C36A4.8 brc-1 1664 7.525 0.952 0.966 0.949 0.966 0.926 0.965 0.947 0.854 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_001254881]
48. K01G5.2 hpl-2 6781 7.525 0.953 0.959 0.972 0.959 0.958 0.897 0.934 0.893 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
49. T28D9.2 rsp-5 6460 7.525 0.980 0.949 0.963 0.949 0.950 0.918 0.950 0.866 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
50. Y53C10A.12 hsf-1 7899 7.523 0.950 0.973 0.977 0.973 0.916 0.879 0.945 0.910 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
51. F10G7.3 unc-85 5206 7.52 0.965 0.969 0.968 0.969 0.941 0.899 0.930 0.879 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
52. F52F12.4 lsl-1 4055 7.519 0.957 0.954 0.975 0.954 0.957 0.871 0.930 0.921 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
53. F28B3.8 imb-1 7515 7.515 0.969 0.955 0.942 0.955 0.942 0.929 0.928 0.895 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
54. E01A2.4 let-504 9788 7.515 0.956 0.966 0.959 0.966 0.973 0.921 0.936 0.838
55. Y110A7A.8 prp-31 4436 7.514 0.975 0.961 0.934 0.961 0.908 0.913 0.942 0.920 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
56. K11D12.2 pqn-51 15951 7.514 0.956 0.973 0.975 0.973 0.959 0.901 0.924 0.853 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
57. F57B1.2 sun-1 5721 7.512 0.974 0.974 0.962 0.974 0.941 0.867 0.920 0.900 Sun domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20924]
58. K01G5.4 ran-1 32379 7.511 0.978 0.963 0.964 0.963 0.930 0.892 0.950 0.871 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
59. C23G10.8 C23G10.8 4642 7.51 0.935 0.975 0.967 0.975 0.946 0.917 0.934 0.861
60. Y55F3AM.12 dcap-1 8679 7.509 0.948 0.980 0.982 0.980 0.948 0.899 0.929 0.843 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
61. Y73B6BL.3 exos-2 2624 7.509 0.942 0.970 0.963 0.970 0.949 0.901 0.940 0.874 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
62. C46A5.9 hcf-1 6295 7.508 0.960 0.978 0.965 0.978 0.952 0.915 0.930 0.830 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
63. Y75B8A.22 tim-1 2124 7.508 0.955 0.923 0.957 0.923 0.961 0.941 0.937 0.911 Protein timeless homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EDN3]
64. T05H4.14 gad-1 7979 7.507 0.973 0.983 0.985 0.983 0.942 0.905 0.876 0.860 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
65. T24D1.5 har-2 2882 7.503 0.949 0.951 0.986 0.951 0.905 0.917 0.931 0.913
66. Y105E8A.17 ekl-4 4732 7.503 0.963 0.981 0.976 0.981 0.932 0.912 0.904 0.854
67. M01E11.5 cey-3 20931 7.501 0.953 0.964 0.981 0.964 0.950 0.895 0.924 0.870 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
68. C18E9.3 szy-20 6819 7.5 0.962 0.972 0.976 0.972 0.964 0.903 0.926 0.825 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
69. K07A1.12 lin-53 15817 7.5 0.964 0.972 0.985 0.972 0.962 0.852 0.936 0.857 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
70. T22C1.3 T22C1.3 2305 7.5 0.965 0.960 0.980 0.960 0.962 0.921 0.906 0.846
71. C08B11.5 sap-49 10553 7.498 0.950 0.962 0.945 0.962 0.943 0.893 0.931 0.912 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
72. ZK1127.4 ZK1127.4 3088 7.498 0.950 0.955 0.967 0.955 0.949 0.941 0.912 0.869 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
73. C16A11.6 fbxc-44 1910 7.497 0.958 0.960 0.955 0.960 0.924 0.956 0.899 0.885 F-box C protein [Source:RefSeq peptide;Acc:NP_494746]
74. R12C12.2 ran-5 14517 7.496 0.975 0.966 0.987 0.966 0.943 0.880 0.959 0.820 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
75. F32H2.1 snpc-4 7581 7.495 0.969 0.968 0.961 0.968 0.944 0.891 0.923 0.871 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
76. C02F5.4 cids-1 3125 7.493 0.960 0.971 0.962 0.971 0.928 0.903 0.941 0.857 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
77. B0240.4 npp-22 5510 7.493 0.928 0.942 0.970 0.942 0.939 0.922 0.912 0.938 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
78. C18G1.5 hil-4 21692 7.49 0.969 0.964 0.970 0.964 0.940 0.905 0.900 0.878 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
79. ZK1248.13 ZK1248.13 1528 7.487 0.925 0.973 0.967 0.973 0.962 0.953 0.821 0.913
80. R119.4 pqn-59 16065 7.487 0.971 0.964 0.974 0.964 0.922 0.951 0.869 0.872 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
81. T12D8.3 acbp-5 6816 7.486 0.937 0.965 0.966 0.965 0.914 0.910 0.939 0.890 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
82. EEED8.1 tofu-6 3962 7.486 0.975 0.941 0.952 0.941 0.942 0.888 0.943 0.904 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
83. R05D11.8 edc-3 5244 7.485 0.946 0.979 0.961 0.979 0.969 0.920 0.948 0.783 yeast Enhancer of DeCapping homolog [Source:RefSeq peptide;Acc:NP_492328]
84. Y48G1A.5 xpo-2 11748 7.485 0.924 0.923 0.959 0.923 0.974 0.929 0.944 0.909 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
85. W02F12.6 sna-1 7338 7.484 0.972 0.973 0.957 0.973 0.946 0.932 0.924 0.807 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
86. F32E10.6 cec-5 10643 7.484 0.978 0.947 0.972 0.947 0.959 0.943 0.899 0.839 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
87. T20G5.11 rde-4 3966 7.484 0.977 0.956 0.963 0.956 0.921 0.931 0.922 0.858 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
88. C50A2.2 cec-2 4169 7.484 0.960 0.969 0.985 0.969 0.913 0.880 0.922 0.886 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
89. Y54E5A.4 npp-4 6288 7.483 0.949 0.964 0.977 0.964 0.965 0.887 0.936 0.841 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
90. F32A5.7 lsm-4 3785 7.483 0.968 0.955 0.967 0.955 0.947 0.871 0.950 0.870 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
91. ZK177.8 ZK177.8 3403 7.482 0.982 0.956 0.975 0.956 0.926 0.891 0.938 0.858
92. C34E10.2 gop-2 5684 7.48 0.969 0.955 0.966 0.955 0.940 0.897 0.910 0.888 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
93. F46F11.2 cey-2 47143 7.479 0.968 0.974 0.961 0.974 0.927 0.896 0.930 0.849 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
94. C07H6.5 cgh-1 60576 7.479 0.953 0.933 0.970 0.933 0.957 0.937 0.942 0.854 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
95. Y55F3AM.7 egrh-2 2072 7.478 0.931 0.933 0.979 0.933 0.945 0.941 0.954 0.862 EGR (Early Growth factor Response factor) Homolog [Source:RefSeq peptide;Acc:NP_001294399]
96. B0205.1 B0205.1 2403 7.478 0.946 0.961 0.961 0.961 0.922 0.905 0.915 0.907
97. C25D7.8 otub-1 7941 7.477 0.952 0.975 0.960 0.975 0.959 0.915 0.918 0.823 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
98. T26A5.7 set-1 6948 7.475 0.930 0.947 0.973 0.947 0.966 0.908 0.944 0.860 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
99. W06E11.4 sbds-1 6701 7.472 0.950 0.970 0.959 0.970 0.944 0.901 0.910 0.868 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
100. ZK328.2 eftu-2 7040 7.472 0.954 0.964 0.963 0.964 0.934 0.901 0.878 0.914 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA