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Results for F28B12.3

Gene ID Gene Name Reads Transcripts Annotation
F28B12.3 vrk-1 7133 F28B12.3.1, F28B12.3.2 Serine/threonine-protein kinase VRK1 [Source:UniProtKB/Swiss-Prot;Acc:Q19848]

Genes with expression patterns similar to F28B12.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28B12.3 vrk-1 7133 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Serine/threonine-protein kinase VRK1 [Source:UniProtKB/Swiss-Prot;Acc:Q19848]
2. C48E7.3 lpd-2 10330 7.645 0.953 0.981 0.975 0.981 0.956 0.928 0.983 0.888 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
3. F55G1.8 plk-3 12036 7.638 0.986 0.967 0.976 0.967 0.965 0.946 0.962 0.869 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
4. Y71G12B.9 lin-65 7476 7.63 0.984 0.979 0.967 0.979 0.975 0.900 0.950 0.896 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
5. JC8.6 lin-54 5789 7.627 0.975 0.968 0.963 0.968 0.962 0.931 0.950 0.910
6. F56D1.7 daz-1 23684 7.615 0.963 0.961 0.981 0.961 0.952 0.954 0.941 0.902 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
7. F56F3.1 ifet-1 25772 7.608 0.920 0.982 0.958 0.982 0.977 0.913 0.966 0.910 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
8. Y37D8A.9 mrg-1 14369 7.602 0.982 0.976 0.977 0.976 0.955 0.878 0.951 0.907 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
9. Y47D3A.26 smc-3 6256 7.599 0.956 0.957 0.982 0.957 0.968 0.944 0.952 0.883 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
10. F14B4.3 rpoa-2 7549 7.597 0.940 0.966 0.961 0.966 0.976 0.917 0.941 0.930 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
11. Y43F4B.3 set-25 8036 7.594 0.970 0.978 0.978 0.978 0.960 0.918 0.914 0.898 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
12. Y53C12B.3 nos-3 20231 7.593 0.955 0.967 0.964 0.967 0.971 0.924 0.944 0.901 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
13. R06F6.1 cdl-1 14167 7.581 0.941 0.967 0.971 0.967 0.953 0.908 0.944 0.930 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
14. Y41D4B.19 npp-8 12992 7.58 0.985 0.976 0.975 0.976 0.966 0.909 0.957 0.836 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
15. R05D11.7 snrp-27 4159 7.58 0.971 0.966 0.968 0.966 0.972 0.928 0.909 0.900 Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
16. F26B1.3 ima-2 18826 7.567 0.973 0.945 0.982 0.945 0.961 0.890 0.957 0.914 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
17. B0414.3 hil-5 10816 7.566 0.967 0.936 0.966 0.936 0.950 0.900 0.970 0.941 Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
18. C30G12.7 puf-8 5785 7.563 0.969 0.973 0.978 0.973 0.938 0.854 0.949 0.929 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
19. F18C5.2 wrn-1 3792 7.561 0.956 0.967 0.989 0.967 0.949 0.940 0.900 0.893 Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
20. Y39E4B.2 snpc-1.2 5800 7.56 0.943 0.977 0.966 0.977 0.961 0.906 0.941 0.889 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
21. C02B10.2 snpn-1 5519 7.556 0.932 0.970 0.969 0.970 0.917 0.955 0.960 0.883 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
22. D2030.8 D2030.8 2645 7.55 0.930 0.981 0.959 0.981 0.922 0.931 0.924 0.922
23. ZC395.8 ztf-8 5521 7.547 0.972 0.976 0.981 0.976 0.918 0.938 0.916 0.870 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_498124]
24. Y41D4B.13 ced-2 10100 7.545 0.974 0.967 0.978 0.967 0.966 0.886 0.935 0.872 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
25. R10E11.4 sqv-3 5431 7.544 0.962 0.952 0.967 0.952 0.942 0.924 0.957 0.888 Probable galactosyltransferase sqv-3 [Source:UniProtKB/Swiss-Prot;Acc:P34548]
26. T09A5.8 cec-3 5813 7.544 0.957 0.958 0.953 0.958 0.954 0.920 0.920 0.924 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
27. Y39G10AL.3 cdk-7 3495 7.543 0.972 0.981 0.954 0.981 0.950 0.950 0.928 0.827 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
28. Y23H5B.6 Y23H5B.6 5886 7.542 0.949 0.950 0.950 0.950 0.959 0.934 0.933 0.917
29. R06A4.4 imb-2 10302 7.54 0.968 0.969 0.977 0.969 0.952 0.909 0.922 0.874 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
30. F23F1.1 nfyc-1 9983 7.536 0.980 0.966 0.982 0.966 0.967 0.916 0.931 0.828 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
31. ZK1320.12 taf-8 3558 7.535 0.964 0.952 0.956 0.952 0.963 0.957 0.912 0.879 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
32. W01A8.5 tofu-5 5678 7.535 0.960 0.975 0.966 0.975 0.943 0.878 0.936 0.902 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
33. F18A1.3 lir-1 2995 7.534 0.947 0.979 0.968 0.979 0.952 0.893 0.935 0.881 LIn-26 Related [Source:RefSeq peptide;Acc:NP_001022093]
34. C34D4.12 cyn-12 7363 7.534 0.925 0.977 0.960 0.977 0.953 0.930 0.918 0.894 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
35. C05C8.5 C05C8.5 2655 7.533 0.944 0.982 0.894 0.982 0.964 0.890 0.927 0.950
36. F10E9.7 F10E9.7 1842 7.532 0.964 0.944 0.958 0.944 0.964 0.927 0.936 0.895
37. R119.7 rnp-8 5640 7.529 0.965 0.942 0.966 0.942 0.981 0.944 0.896 0.893 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_001293232]
38. Y14H12B.2 Y14H12B.2 6496 7.529 0.976 0.955 0.981 0.955 0.946 0.862 0.934 0.920
39. R07E5.14 rnp-4 11659 7.529 0.960 0.976 0.976 0.976 0.944 0.873 0.940 0.884 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
40. ZK1128.6 ttll-4 6059 7.529 0.960 0.969 0.967 0.969 0.966 0.883 0.935 0.880 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
41. C09H6.3 mau-2 3280 7.527 0.967 0.962 0.949 0.962 0.957 0.926 0.933 0.871 Maternal uncoordinated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O17581]
42. F59A2.1 npp-9 34375 7.527 0.986 0.946 0.966 0.946 0.970 0.895 0.955 0.863 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
43. T19B4.2 npp-7 13073 7.527 0.957 0.973 0.972 0.973 0.943 0.914 0.953 0.842 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
44. T20B12.2 tbp-1 9014 7.526 0.954 0.952 0.984 0.952 0.897 0.940 0.928 0.919 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
45. F21C3.4 rde-2 6286 7.526 0.931 0.969 0.956 0.969 0.968 0.904 0.943 0.886
46. K01G5.2 hpl-2 6781 7.525 0.953 0.959 0.972 0.959 0.958 0.897 0.934 0.893 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
47. B0035.12 sart-3 7188 7.525 0.966 0.965 0.954 0.965 0.964 0.916 0.952 0.843 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
48. C36A4.8 brc-1 1664 7.525 0.952 0.966 0.949 0.966 0.926 0.965 0.947 0.854 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_001254881]
49. T28D9.2 rsp-5 6460 7.525 0.980 0.949 0.963 0.949 0.950 0.918 0.950 0.866 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
50. Y53C10A.12 hsf-1 7899 7.523 0.950 0.973 0.977 0.973 0.916 0.879 0.945 0.910 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
51. F10G7.3 unc-85 5206 7.52 0.965 0.969 0.968 0.969 0.941 0.899 0.930 0.879 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
52. F52F12.4 lsl-1 4055 7.519 0.957 0.954 0.975 0.954 0.957 0.871 0.930 0.921 LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
53. F28B3.8 imb-1 7515 7.515 0.969 0.955 0.942 0.955 0.942 0.929 0.928 0.895 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
54. E01A2.4 let-504 9788 7.515 0.956 0.966 0.959 0.966 0.973 0.921 0.936 0.838
55. Y110A7A.8 prp-31 4436 7.514 0.975 0.961 0.934 0.961 0.908 0.913 0.942 0.920 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
56. K11D12.2 pqn-51 15951 7.514 0.956 0.973 0.975 0.973 0.959 0.901 0.924 0.853 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
57. F57B1.2 sun-1 5721 7.512 0.974 0.974 0.962 0.974 0.941 0.867 0.920 0.900 Sun domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20924]
58. K01G5.4 ran-1 32379 7.511 0.978 0.963 0.964 0.963 0.930 0.892 0.950 0.871 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
59. C23G10.8 C23G10.8 4642 7.51 0.935 0.975 0.967 0.975 0.946 0.917 0.934 0.861
60. Y55F3AM.12 dcap-1 8679 7.509 0.948 0.980 0.982 0.980 0.948 0.899 0.929 0.843 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
61. Y73B6BL.3 exos-2 2624 7.509 0.942 0.970 0.963 0.970 0.949 0.901 0.940 0.874 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
62. C46A5.9 hcf-1 6295 7.508 0.960 0.978 0.965 0.978 0.952 0.915 0.930 0.830 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
63. Y75B8A.22 tim-1 2124 7.508 0.955 0.923 0.957 0.923 0.961 0.941 0.937 0.911 Protein timeless homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EDN3]
64. T05H4.14 gad-1 7979 7.507 0.973 0.983 0.985 0.983 0.942 0.905 0.876 0.860 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
65. T24D1.5 har-2 2882 7.503 0.949 0.951 0.986 0.951 0.905 0.917 0.931 0.913
66. Y105E8A.17 ekl-4 4732 7.503 0.963 0.981 0.976 0.981 0.932 0.912 0.904 0.854
67. M01E11.5 cey-3 20931 7.501 0.953 0.964 0.981 0.964 0.950 0.895 0.924 0.870 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
68. C18E9.3 szy-20 6819 7.5 0.962 0.972 0.976 0.972 0.964 0.903 0.926 0.825 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
69. K07A1.12 lin-53 15817 7.5 0.964 0.972 0.985 0.972 0.962 0.852 0.936 0.857 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
70. T22C1.3 T22C1.3 2305 7.5 0.965 0.960 0.980 0.960 0.962 0.921 0.906 0.846
71. C08B11.5 sap-49 10553 7.498 0.950 0.962 0.945 0.962 0.943 0.893 0.931 0.912 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
72. ZK1127.4 ZK1127.4 3088 7.498 0.950 0.955 0.967 0.955 0.949 0.941 0.912 0.869 Protein BCCIP homolog [Source:UniProtKB/Swiss-Prot;Acc:Q23402]
73. C16A11.6 fbxc-44 1910 7.497 0.958 0.960 0.955 0.960 0.924 0.956 0.899 0.885 F-box C protein [Source:RefSeq peptide;Acc:NP_494746]
74. R12C12.2 ran-5 14517 7.496 0.975 0.966 0.987 0.966 0.943 0.880 0.959 0.820 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
75. F32H2.1 snpc-4 7581 7.495 0.969 0.968 0.961 0.968 0.944 0.891 0.923 0.871 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
76. C02F5.4 cids-1 3125 7.493 0.960 0.971 0.962 0.971 0.928 0.903 0.941 0.857 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
77. B0240.4 npp-22 5510 7.493 0.928 0.942 0.970 0.942 0.939 0.922 0.912 0.938 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
78. C18G1.5 hil-4 21692 7.49 0.969 0.964 0.970 0.964 0.940 0.905 0.900 0.878 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
79. ZK1248.13 ZK1248.13 1528 7.487 0.925 0.973 0.967 0.973 0.962 0.953 0.821 0.913
80. R119.4 pqn-59 16065 7.487 0.971 0.964 0.974 0.964 0.922 0.951 0.869 0.872 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
81. T12D8.3 acbp-5 6816 7.486 0.937 0.965 0.966 0.965 0.914 0.910 0.939 0.890 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
82. EEED8.1 tofu-6 3962 7.486 0.975 0.941 0.952 0.941 0.942 0.888 0.943 0.904 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
83. R05D11.8 edc-3 5244 7.485 0.946 0.979 0.961 0.979 0.969 0.920 0.948 0.783 yeast Enhancer of DeCapping homolog [Source:RefSeq peptide;Acc:NP_492328]
84. Y48G1A.5 xpo-2 11748 7.485 0.924 0.923 0.959 0.923 0.974 0.929 0.944 0.909 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
85. W02F12.6 sna-1 7338 7.484 0.972 0.973 0.957 0.973 0.946 0.932 0.924 0.807 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
86. F32E10.6 cec-5 10643 7.484 0.978 0.947 0.972 0.947 0.959 0.943 0.899 0.839 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
87. T20G5.11 rde-4 3966 7.484 0.977 0.956 0.963 0.956 0.921 0.931 0.922 0.858 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
88. C50A2.2 cec-2 4169 7.484 0.960 0.969 0.985 0.969 0.913 0.880 0.922 0.886 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
89. F32A5.7 lsm-4 3785 7.483 0.968 0.955 0.967 0.955 0.947 0.871 0.950 0.870 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
90. Y54E5A.4 npp-4 6288 7.483 0.949 0.964 0.977 0.964 0.965 0.887 0.936 0.841 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
91. ZK177.8 ZK177.8 3403 7.482 0.982 0.956 0.975 0.956 0.926 0.891 0.938 0.858
92. C34E10.2 gop-2 5684 7.48 0.969 0.955 0.966 0.955 0.940 0.897 0.910 0.888 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
93. F46F11.2 cey-2 47143 7.479 0.968 0.974 0.961 0.974 0.927 0.896 0.930 0.849 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
94. C07H6.5 cgh-1 60576 7.479 0.953 0.933 0.970 0.933 0.957 0.937 0.942 0.854 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
95. Y55F3AM.7 egrh-2 2072 7.478 0.931 0.933 0.979 0.933 0.945 0.941 0.954 0.862 EGR (Early Growth factor Response factor) Homolog [Source:RefSeq peptide;Acc:NP_001294399]
96. B0205.1 B0205.1 2403 7.478 0.946 0.961 0.961 0.961 0.922 0.905 0.915 0.907
97. C25D7.8 otub-1 7941 7.477 0.952 0.975 0.960 0.975 0.959 0.915 0.918 0.823 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
98. T26A5.7 set-1 6948 7.475 0.930 0.947 0.973 0.947 0.966 0.908 0.944 0.860 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
99. W06E11.4 sbds-1 6701 7.472 0.950 0.970 0.959 0.970 0.944 0.901 0.910 0.868 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
100. ZK328.2 eftu-2 7040 7.472 0.954 0.964 0.963 0.964 0.934 0.901 0.878 0.914 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA