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Results for Y56A3A.28

Gene ID Gene Name Reads Transcripts Annotation
Y56A3A.28 Y56A3A.28 1917 Y56A3A.28

Genes with expression patterns similar to Y56A3A.28

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y56A3A.28 Y56A3A.28 1917 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. T06A10.4 lsy-13 7631 7.492 0.909 0.921 0.950 0.921 0.978 0.940 0.900 0.973
3. T20G5.10 blos-1 2172 7.483 0.900 0.934 0.925 0.934 0.967 0.964 0.906 0.953 Biogenesis of lysosome-related organelles complex 1 subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q22616]
4. B0035.3 B0035.3 4118 7.479 0.941 0.918 0.947 0.918 0.972 0.952 0.932 0.899
5. C13G5.2 C13G5.2 3532 7.478 0.931 0.942 0.949 0.942 0.960 0.927 0.906 0.921
6. C27B7.1 spr-2 14958 7.471 0.949 0.920 0.937 0.920 0.974 0.956 0.881 0.934 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
7. Y65B4BL.2 deps-1 18277 7.465 0.920 0.941 0.954 0.941 0.955 0.926 0.882 0.946
8. Y71F9B.16 dnj-30 4262 7.461 0.924 0.927 0.956 0.927 0.919 0.953 0.923 0.932 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
9. C02B10.5 C02B10.5 9171 7.459 0.931 0.904 0.932 0.904 0.968 0.947 0.918 0.955
10. T10C6.4 srx-44 8454 7.457 0.932 0.930 0.961 0.930 0.948 0.953 0.894 0.909 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
11. F22D6.3 nars-1 18624 7.451 0.944 0.919 0.923 0.919 0.970 0.927 0.900 0.949 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
12. K01G5.4 ran-1 32379 7.446 0.951 0.923 0.928 0.923 0.963 0.902 0.906 0.950 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
13. C33H5.12 rsp-6 23342 7.441 0.954 0.915 0.936 0.915 0.969 0.864 0.924 0.964 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
14. Y38A8.3 ulp-2 7403 7.438 0.932 0.908 0.948 0.908 0.973 0.939 0.886 0.944 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
15. B0511.13 B0511.13 4689 7.438 0.938 0.924 0.920 0.924 0.966 0.951 0.900 0.915 Metallophosphoesterase 1 homolog [Source:RefSeq peptide;Acc:NP_001251442]
16. C52E4.6 cyl-1 6405 7.438 0.931 0.922 0.932 0.922 0.950 0.941 0.900 0.940 CYclin L [Source:RefSeq peptide;Acc:NP_506007]
17. W01G7.3 rpb-11 7826 7.437 0.902 0.926 0.955 0.926 0.976 0.921 0.884 0.947 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
18. F23B12.6 fntb-1 4392 7.437 0.938 0.920 0.945 0.920 0.953 0.937 0.895 0.929 FarNesylTransferase, Beta subunit [Source:RefSeq peptide;Acc:NP_506580]
19. B0495.6 moa-2 6366 7.435 0.928 0.932 0.945 0.932 0.970 0.932 0.871 0.925
20. F37E3.1 ncbp-1 5649 7.428 0.940 0.905 0.952 0.905 0.961 0.923 0.902 0.940 Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
21. C05C8.6 hpo-9 8263 7.426 0.941 0.914 0.952 0.914 0.951 0.950 0.893 0.911
22. F32E10.6 cec-5 10643 7.425 0.942 0.885 0.939 0.885 0.966 0.925 0.921 0.962 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
23. T12D8.3 acbp-5 6816 7.423 0.934 0.923 0.932 0.923 0.967 0.945 0.901 0.898 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
24. M01D7.6 emr-1 4358 7.421 0.918 0.917 0.924 0.917 0.972 0.924 0.920 0.929 Emerin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01971]
25. T19B4.2 npp-7 13073 7.421 0.937 0.899 0.925 0.899 0.975 0.964 0.912 0.910 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
26. F28B3.7 him-1 18274 7.421 0.916 0.909 0.965 0.909 0.926 0.941 0.901 0.954 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
27. F23F1.1 nfyc-1 9983 7.42 0.956 0.916 0.953 0.916 0.918 0.902 0.911 0.948 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
28. ZK686.4 snu-23 9040 7.409 0.937 0.898 0.924 0.898 0.968 0.952 0.920 0.912 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
29. Y37A1B.1 lst-3 10739 7.407 0.895 0.924 0.937 0.924 0.964 0.923 0.923 0.917 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
30. Y73F8A.34 tag-349 7966 7.407 0.930 0.906 0.944 0.906 0.955 0.940 0.896 0.930
31. ZK616.6 perm-3 16186 7.403 0.925 0.895 0.925 0.895 0.970 0.952 0.887 0.954 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
32. C36B1.8 gls-1 8617 7.402 0.914 0.904 0.921 0.904 0.962 0.944 0.929 0.924 Germline survival defective-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4M5]
33. F10G8.3 rae-1 7542 7.4 0.922 0.894 0.924 0.894 0.960 0.966 0.896 0.944 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
34. T05H4.14 gad-1 7979 7.4 0.936 0.916 0.936 0.916 0.959 0.936 0.917 0.884 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
35. R12C12.2 ran-5 14517 7.395 0.928 0.875 0.959 0.875 0.964 0.946 0.922 0.926 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
36. C15H11.4 dhs-22 21674 7.395 0.934 0.918 0.930 0.918 0.967 0.909 0.904 0.915 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
37. Y54E5A.4 npp-4 6288 7.393 0.931 0.878 0.942 0.878 0.962 0.972 0.888 0.942 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
38. F42A6.7 hrp-1 28201 7.393 0.954 0.901 0.924 0.901 0.978 0.886 0.930 0.919 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
39. C25D7.8 otub-1 7941 7.39 0.927 0.924 0.940 0.924 0.961 0.915 0.896 0.903 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
40. T04A8.14 emb-5 11746 7.39 0.918 0.900 0.935 0.900 0.973 0.941 0.877 0.946 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
41. Y54E2A.3 tac-1 6308 7.389 0.914 0.907 0.921 0.907 0.956 0.950 0.890 0.944 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
42. Y97E10AR.5 rpb-9 3598 7.387 0.944 0.929 0.897 0.929 0.975 0.939 0.830 0.944 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_505062]
43. Y61A9LA.8 sut-2 11388 7.386 0.915 0.927 0.931 0.927 0.944 0.906 0.886 0.950 Zinc finger CCCH domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q95XU6]
44. B0261.4 mrpl-47 8210 7.384 0.877 0.931 0.948 0.931 0.972 0.886 0.923 0.916 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
45. T10F2.1 gars-1 7204 7.382 0.942 0.910 0.931 0.910 0.951 0.939 0.857 0.942 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
46. D2089.1 rsp-7 11057 7.38 0.899 0.915 0.951 0.915 0.920 0.954 0.876 0.950 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
47. W04D2.5 mrps-11 5757 7.38 0.932 0.894 0.919 0.894 0.955 0.920 0.902 0.964 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
48. ZK1098.7 mrps-23 2365 7.378 0.934 0.914 0.893 0.914 0.961 0.907 0.928 0.927 Probable 28S ribosomal protein S23, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34748]
49. F45F2.11 F45F2.11 6741 7.375 0.900 0.921 0.943 0.921 0.969 0.913 0.896 0.912
50. H19N07.1 erfa-3 19869 7.373 0.944 0.905 0.929 0.905 0.965 0.917 0.887 0.921 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
51. T01G1.3 sec-31 10504 7.372 0.937 0.931 0.931 0.931 0.955 0.918 0.817 0.952 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
52. C36B1.3 rpb-3 4442 7.372 0.933 0.905 0.948 0.905 0.944 0.949 0.838 0.950 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
53. T20G5.11 rde-4 3966 7.372 0.902 0.901 0.959 0.901 0.953 0.952 0.881 0.923 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
54. F18A1.3 lir-1 2995 7.371 0.891 0.911 0.922 0.911 0.945 0.965 0.919 0.907 LIn-26 Related [Source:RefSeq peptide;Acc:NP_001022093]
55. F28B3.8 imb-1 7515 7.37 0.932 0.898 0.938 0.898 0.936 0.954 0.910 0.904 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
56. D1054.14 prp-38 6504 7.369 0.905 0.924 0.936 0.924 0.935 0.950 0.859 0.936 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
57. F32H2.4 thoc-3 3861 7.368 0.898 0.894 0.954 0.894 0.951 0.958 0.895 0.924 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
58. F18E2.3 scc-3 13464 7.368 0.926 0.924 0.958 0.924 0.903 0.925 0.886 0.922 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
59. F32H2.1 snpc-4 7581 7.366 0.927 0.918 0.933 0.918 0.966 0.886 0.928 0.890 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
60. T16G1.11 eif-3.K 14014 7.365 0.927 0.898 0.892 0.898 0.965 0.908 0.917 0.960 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
61. C05D11.3 txdc-9 4903 7.365 0.899 0.917 0.930 0.917 0.970 0.923 0.840 0.969 Thioredoxin domain-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q11183]
62. F39H2.2 sig-7 1819 7.364 0.879 0.949 0.954 0.949 0.960 0.953 0.855 0.865
63. C18D11.4 rsp-8 18308 7.364 0.951 0.887 0.897 0.887 0.964 0.909 0.918 0.951 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
64. F58E10.3 ddx-17 15107 7.363 0.953 0.910 0.942 0.910 0.951 0.877 0.872 0.948 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
65. F46B6.3 smg-4 4959 7.363 0.950 0.888 0.936 0.888 0.946 0.926 0.903 0.926 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
66. C50C3.6 prp-8 19582 7.362 0.954 0.893 0.946 0.893 0.950 0.925 0.875 0.926 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
67. K04C2.4 brd-1 2439 7.361 0.914 0.908 0.958 0.908 0.936 0.932 0.880 0.925 BRCA1-associated RING domain protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21209]
68. F26F4.10 rars-1 9971 7.361 0.949 0.882 0.928 0.882 0.958 0.940 0.920 0.902 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
69. K12D12.2 npp-3 6914 7.361 0.904 0.938 0.903 0.938 0.957 0.933 0.891 0.897 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
70. B0336.8 lgg-3 2417 7.36 0.909 0.911 0.962 0.911 0.959 0.923 0.865 0.920 Ubiquitin-like protein ATG12 [Source:RefSeq peptide;Acc:NP_498228]
71. Y47G6A.20 rnp-6 5542 7.36 0.957 0.898 0.943 0.898 0.917 0.951 0.888 0.908 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
72. W02B12.3 rsp-1 9235 7.359 0.951 0.884 0.944 0.884 0.953 0.897 0.891 0.955 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
73. Y56A3A.20 ccf-1 18463 7.359 0.904 0.914 0.929 0.914 0.962 0.917 0.874 0.945 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
74. ZK856.12 hpo-40 7855 7.357 0.891 0.923 0.929 0.923 0.953 0.940 0.910 0.888
75. Y40B1B.5 eif-3.J 15061 7.357 0.946 0.901 0.915 0.901 0.955 0.935 0.911 0.893 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
76. Y39G10AR.9 Y39G10AR.9 3972 7.356 0.925 0.931 0.882 0.931 0.956 0.944 0.883 0.904
77. T13F2.7 sna-2 4771 7.354 0.858 0.921 0.900 0.921 0.957 0.959 0.920 0.918 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_501744]
78. T10F2.4 prp-19 11298 7.354 0.926 0.889 0.938 0.889 0.973 0.937 0.899 0.903 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
79. T23H2.1 npp-12 12425 7.354 0.959 0.880 0.940 0.880 0.970 0.902 0.907 0.916 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
80. C34E10.5 prmt-5 12277 7.354 0.919 0.884 0.940 0.884 0.968 0.940 0.907 0.912 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
81. C26E6.4 rpb-2 7053 7.353 0.935 0.894 0.924 0.894 0.967 0.918 0.886 0.935 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
82. C48B4.11 C48B4.11 4384 7.352 0.927 0.922 0.933 0.922 0.954 0.869 0.897 0.928
83. T25G3.3 T25G3.3 7285 7.351 0.926 0.907 0.891 0.907 0.952 0.942 0.903 0.923
84. Y46G5A.4 snrp-200 13827 7.351 0.885 0.903 0.945 0.903 0.942 0.903 0.909 0.961 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
85. K10C3.2 ensa-1 19836 7.35 0.935 0.890 0.937 0.890 0.952 0.912 0.902 0.932 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
86. C18E9.6 tomm-40 13426 7.349 0.903 0.885 0.876 0.885 0.951 0.957 0.941 0.951 Mitochondrial import receptor subunit TOM40 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18090]
87. C18A3.5 tiar-1 25400 7.349 0.955 0.906 0.944 0.906 0.958 0.861 0.916 0.903 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
88. D1081.8 cdc-5L 8553 7.349 0.921 0.920 0.940 0.920 0.969 0.906 0.857 0.916 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
89. T19B10.4 pqn-70 5002 7.348 0.914 0.911 0.951 0.911 0.976 0.904 0.868 0.913 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_505850]
90. Y102A5A.1 cand-1 11808 7.348 0.895 0.903 0.922 0.903 0.960 0.926 0.921 0.918 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
91. ZK1010.3 frg-1 3533 7.348 0.959 0.906 0.938 0.906 0.941 0.919 0.827 0.952 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
92. W02F12.6 sna-1 7338 7.347 0.925 0.922 0.931 0.922 0.957 0.897 0.878 0.915 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
93. R09B3.4 ubc-12 7667 7.346 0.879 0.908 0.914 0.908 0.960 0.965 0.891 0.921 NEDD8-conjugating enzyme ubc-12 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVK5]
94. F32E10.4 ima-3 35579 7.346 0.923 0.907 0.919 0.907 0.953 0.908 0.883 0.946 Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19969]
95. T21D12.3 pqbp-1.1 5755 7.344 0.884 0.871 0.934 0.871 0.975 0.945 0.900 0.964 PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
96. T27F2.1 skp-1 3532 7.343 0.917 0.918 0.919 0.918 0.955 0.925 0.880 0.911 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
97. Y32F6A.1 set-22 2474 7.343 0.903 0.934 0.932 0.934 0.958 0.867 0.883 0.932 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_505681]
98. F35G12.9 apc-11 2538 7.342 0.884 0.935 0.939 0.935 0.966 0.940 0.868 0.875 Anaphase Promoting Complex; see also mat [Source:RefSeq peptide;Acc:NP_497937]
99. T17E9.2 nmt-1 8017 7.34 0.904 0.898 0.912 0.898 0.968 0.956 0.892 0.912 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
100. F41H10.4 F41H10.4 3295 7.34 0.913 0.885 0.938 0.885 0.963 0.921 0.917 0.918

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA