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Results for Y48E1A.1

Gene ID Gene Name Reads Transcripts Annotation
Y48E1A.1 rpoa-1 1960 Y48E1A.1a, Y48E1A.1b DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_001022450]

Genes with expression patterns similar to Y48E1A.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y48E1A.1 rpoa-1 1960 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_001022450]
2. Y53C12B.3 nos-3 20231 7.475 0.893 0.945 0.950 0.945 0.962 0.960 0.907 0.913 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
3. T23F6.4 rbd-1 5825 7.455 0.934 0.941 0.943 0.941 0.920 0.956 0.911 0.909 RBD (RNA binding domain) protein [Source:RefSeq peptide;Acc:NP_502432]
4. C25A1.10 dao-5 18351 7.454 0.923 0.951 0.909 0.951 0.964 0.962 0.878 0.916 Dauer or Aging adult Overexpression [Source:RefSeq peptide;Acc:NP_001021004]
5. Y113G7B.17 prmt-1 43709 7.452 0.917 0.941 0.940 0.941 0.968 0.927 0.900 0.918 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
6. C27H6.2 ruvb-1 6291 7.444 0.896 0.960 0.917 0.960 0.951 0.952 0.913 0.895 RuvB-like 1 [Source:UniProtKB/Swiss-Prot;Acc:O17607]
7. W06E11.4 sbds-1 6701 7.443 0.843 0.938 0.933 0.938 0.974 0.966 0.930 0.921 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
8. C49H3.10 xpo-3 9101 7.443 0.880 0.924 0.933 0.924 0.951 0.955 0.922 0.954 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001294153]
9. Y23H5B.6 Y23H5B.6 5886 7.427 0.868 0.933 0.936 0.933 0.964 0.968 0.905 0.920
10. K01C8.9 nst-1 4587 7.426 0.917 0.931 0.930 0.931 0.934 0.969 0.885 0.929 Guanine nucleotide-binding protein-like 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21086]
11. C15H11.9 rrbs-1 9177 7.423 0.917 0.947 0.929 0.947 0.969 0.941 0.895 0.878 Ribosome biogenesis regulatory protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVT0]
12. F10G7.1 tag-151 9031 7.417 0.916 0.932 0.951 0.932 0.972 0.955 0.886 0.873 Pre-rRNA-processing protein TSR1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19329]
13. F32H2.1 snpc-4 7581 7.416 0.877 0.936 0.920 0.936 0.948 0.965 0.933 0.901 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
14. Y39B6A.36 Y39B6A.36 1840 7.409 0.946 0.882 0.893 0.882 0.952 0.976 0.933 0.945 General transcription factor IIF subunit 2 [Source:RefSeq peptide;Acc:NP_741661]
15. R13F6.10 cra-1 11610 7.409 0.916 0.947 0.950 0.947 0.920 0.954 0.873 0.902 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
16. C07E3.2 pro-2 4193 7.405 0.914 0.938 0.947 0.938 0.947 0.971 0.855 0.895 Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
17. R144.7 larp-1 24669 7.404 0.910 0.941 0.935 0.941 0.909 0.953 0.923 0.892 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
18. Y46G5A.4 snrp-200 13827 7.4 0.876 0.948 0.950 0.948 0.927 0.961 0.903 0.887 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
19. Y105E8B.3 riok-2 5531 7.396 0.908 0.942 0.926 0.942 0.967 0.954 0.858 0.899 Serine/threonine-protein kinase RIO2 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q34]
20. F09F7.3 rpc-2 9751 7.395 0.912 0.946 0.917 0.946 0.954 0.960 0.902 0.858 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
21. D2096.8 nap-1 59459 7.394 0.900 0.943 0.901 0.943 0.975 0.953 0.839 0.940 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
22. Y54E5A.6 Y54E5A.6 770 7.39 0.874 0.899 0.946 0.899 0.966 0.966 0.922 0.918
23. ZK328.2 eftu-2 7040 7.388 0.892 0.918 0.944 0.918 0.964 0.944 0.920 0.888 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
24. Y54H5A.2 Y54H5A.2 2168 7.385 0.900 0.889 0.949 0.889 0.964 0.951 0.890 0.953
25. F14B4.3 rpoa-2 7549 7.382 0.913 0.916 0.929 0.916 0.955 0.963 0.890 0.900 DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
26. C34E10.5 prmt-5 12277 7.381 0.862 0.919 0.950 0.919 0.932 0.972 0.878 0.949 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
27. F56D2.6 ddx-15 12282 7.38 0.905 0.913 0.953 0.913 0.945 0.945 0.911 0.895 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
28. K07C5.6 K07C5.6 7375 7.377 0.935 0.888 0.927 0.888 0.963 0.943 0.923 0.910 Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/Swiss-Prot;Acc:Q21278]
29. F20A1.9 tofu-2 3341 7.377 0.859 0.943 0.928 0.943 0.967 0.944 0.899 0.894 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_504786]
30. Y47D3A.26 smc-3 6256 7.375 0.883 0.947 0.951 0.947 0.948 0.949 0.863 0.887 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
31. R13A5.12 lpd-7 10476 7.374 0.863 0.965 0.895 0.965 0.950 0.959 0.895 0.882 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
32. F56D12.5 vig-1 42594 7.369 0.863 0.948 0.921 0.948 0.940 0.950 0.932 0.867 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
33. T10B5.5 cct-7 24616 7.369 0.880 0.922 0.956 0.922 0.954 0.929 0.889 0.917 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
34. T01E8.6 mrps-14 9328 7.369 0.831 0.940 0.928 0.940 0.943 0.966 0.885 0.936 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
35. F55F8.3 F55F8.3 2107 7.368 0.928 0.899 0.941 0.899 0.957 0.934 0.904 0.906 Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
36. M88.5 zbp-1 11851 7.365 0.873 0.931 0.925 0.931 0.956 0.948 0.891 0.910 Zipcode Binding Protein homolog [Source:RefSeq peptide;Acc:NP_001022695]
37. H12I13.4 fbf-1 5587 7.36 0.869 0.955 0.928 0.955 0.962 0.918 0.929 0.844 Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]
38. B0464.2 ctr-9 7610 7.359 0.895 0.923 0.916 0.923 0.942 0.951 0.936 0.873 RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
39. T19A6.2 ngp-1 5884 7.359 0.911 0.944 0.900 0.944 0.951 0.965 0.834 0.910 Nuclear/nucleolar GTP-binding Protein family [Source:RefSeq peptide;Acc:NP_492275]
40. M01B12.5 riok-1 6698 7.357 0.896 0.955 0.923 0.955 0.931 0.953 0.877 0.867 Serine/threonine-protein kinase RIO1 [Source:UniProtKB/Swiss-Prot;Acc:O44959]
41. Y71G12B.8 ddx-27 3584 7.357 0.870 0.958 0.933 0.958 0.944 0.932 0.856 0.906 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_490891]
42. C04G2.6 dis-3 5048 7.356 0.897 0.928 0.952 0.928 0.966 0.949 0.869 0.867 Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
43. C14A4.4 crn-3 6558 7.355 0.928 0.913 0.929 0.913 0.928 0.955 0.892 0.897 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
44. F28B3.8 imb-1 7515 7.355 0.878 0.920 0.918 0.920 0.928 0.959 0.904 0.928 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
45. Y116A8C.42 snr-1 17062 7.355 0.866 0.930 0.935 0.930 0.982 0.934 0.891 0.887 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
46. C01F6.8 icln-1 6586 7.351 0.828 0.937 0.959 0.937 0.979 0.956 0.832 0.923 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
47. Y48B6A.3 xrn-2 4881 7.35 0.904 0.967 0.881 0.967 0.954 0.934 0.830 0.913 5'-3' exoribonuclease 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9U299]
48. Y71F9B.4 snr-7 13542 7.35 0.828 0.931 0.924 0.931 0.977 0.952 0.879 0.928 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
49. B0511.8 mrps-30 5050 7.35 0.877 0.932 0.912 0.932 0.935 0.958 0.890 0.914 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
50. Y18D10A.1 attf-6 6942 7.349 0.906 0.912 0.948 0.912 0.932 0.953 0.925 0.861 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
51. T01C3.7 fib-1 23572 7.347 0.923 0.925 0.920 0.925 0.967 0.939 0.856 0.892 rRNA 2'-O-methyltransferase fibrillarin [Source:UniProtKB/Swiss-Prot;Acc:Q22053]
52. Y111B2A.2 Y111B2A.2 21569 7.347 0.892 0.945 0.929 0.945 0.972 0.910 0.890 0.864
53. K09H9.6 lpd-6 5459 7.347 0.910 0.957 0.934 0.957 0.967 0.933 0.884 0.805 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491108]
54. M88.7 cisd-3.1 5713 7.346 0.831 0.936 0.939 0.936 0.935 0.950 0.901 0.918 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
55. F32E10.6 cec-5 10643 7.345 0.836 0.930 0.951 0.930 0.918 0.960 0.917 0.903 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
56. C14A4.14 mrps-22 7966 7.345 0.844 0.947 0.893 0.947 0.965 0.943 0.923 0.883 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_496281]
57. F42A10.1 abcf-3 5557 7.343 0.882 0.931 0.940 0.931 0.918 0.954 0.870 0.917 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_498339]
58. T13H5.5 mrps-18B 3430 7.338 0.834 0.919 0.875 0.919 0.976 0.953 0.928 0.934 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_495800]
59. B0035.12 sart-3 7188 7.337 0.888 0.903 0.932 0.903 0.962 0.973 0.861 0.915 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
60. C06A1.5 rpb-6 7515 7.336 0.849 0.932 0.902 0.932 0.968 0.919 0.910 0.924 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
61. K01G5.1 rnf-113 4336 7.33 0.869 0.912 0.945 0.912 0.928 0.961 0.937 0.866 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
62. K04C2.3 K04C2.3 23540 7.329 0.932 0.880 0.923 0.880 0.958 0.965 0.876 0.915
63. F57C9.5 htp-3 2363 7.329 0.899 0.935 0.951 0.935 0.950 0.904 0.920 0.835 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_491458]
64. T21B10.7 cct-2 13999 7.328 0.847 0.944 0.921 0.944 0.968 0.970 0.845 0.889 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
65. Y111B2A.17 elpc-2 3504 7.327 0.867 0.942 0.954 0.942 0.919 0.939 0.877 0.887 ELongator complex Protein Component [Source:RefSeq peptide;Acc:NP_499648]
66. H20J04.5 pfd-2 8082 7.327 0.873 0.921 0.892 0.921 0.955 0.934 0.886 0.945 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
67. F21C3.4 rde-2 6286 7.326 0.864 0.902 0.933 0.902 0.945 0.960 0.884 0.936
68. T21C9.12 scpl-4 14723 7.324 0.860 0.944 0.907 0.944 0.908 0.968 0.901 0.892 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
69. Y37D8A.11 cec-7 8801 7.322 0.886 0.922 0.956 0.922 0.962 0.944 0.878 0.852 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
70. ZK945.3 puf-12 6266 7.322 0.899 0.922 0.872 0.922 0.947 0.958 0.906 0.896 Pumilio domain-containing protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q09622]
71. C34E10.2 gop-2 5684 7.32 0.843 0.914 0.942 0.914 0.986 0.942 0.879 0.900 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
72. T28D9.2 rsp-5 6460 7.32 0.842 0.929 0.927 0.929 0.957 0.949 0.910 0.877 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
73. T09E8.2 him-17 4153 7.319 0.804 0.941 0.922 0.941 0.978 0.945 0.871 0.917 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_506277]
74. K08F4.2 gtbp-1 25222 7.318 0.854 0.918 0.941 0.918 0.966 0.963 0.852 0.906 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
75. F55H2.6 clu-1 21404 7.318 0.907 0.914 0.891 0.914 0.972 0.951 0.885 0.884 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
76. C04H5.6 mog-4 4517 7.317 0.845 0.926 0.947 0.926 0.958 0.959 0.911 0.845 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
77. C14A4.5 crn-5 1759 7.316 0.830 0.921 0.935 0.921 0.966 0.944 0.872 0.927 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
78. C01G8.6 hpo-32 7439 7.311 0.934 0.909 0.880 0.909 0.972 0.952 0.881 0.874
79. C03D6.8 rpl-24.2 5932 7.31 0.909 0.906 0.884 0.906 0.944 0.956 0.876 0.929 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
80. C27H6.3 tofu-1 2992 7.308 0.853 0.936 0.927 0.936 0.980 0.926 0.882 0.868 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
81. F23F1.1 nfyc-1 9983 7.308 0.835 0.930 0.914 0.930 0.955 0.961 0.916 0.867 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
82. B0564.1 tin-9.2 1799 7.308 0.851 0.937 0.911 0.937 0.959 0.930 0.872 0.911 Mitochondrial import inner membrane translocase subunit Tim10B [Source:UniProtKB/Swiss-Prot;Acc:Q9Y0V2]
83. T21B10.1 mrpl-50 14595 7.307 0.854 0.934 0.927 0.934 0.947 0.964 0.864 0.883 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
84. Y50D7A.9 taco-1 5949 7.306 0.851 0.919 0.879 0.919 0.966 0.943 0.901 0.928 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
85. F18C5.3 tag-184 4027 7.305 0.917 0.938 0.923 0.938 0.929 0.963 0.869 0.828
86. R09B3.5 mag-1 7496 7.304 0.816 0.911 0.939 0.911 0.951 0.944 0.928 0.904 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
87. C52E4.3 snr-4 19308 7.302 0.822 0.936 0.950 0.936 0.965 0.931 0.806 0.956 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
88. T04A8.11 mrpl-16 5998 7.302 0.827 0.924 0.920 0.924 0.961 0.958 0.943 0.845 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_497965]
89. K01G5.4 ran-1 32379 7.3 0.807 0.927 0.928 0.927 0.933 0.950 0.907 0.921 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
90. Y22D7AL.5 hsp-60 42542 7.299 0.888 0.913 0.879 0.913 0.934 0.907 0.905 0.960 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
91. D2030.6 prg-1 26751 7.298 0.917 0.919 0.945 0.919 0.883 0.951 0.915 0.849 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
92. W06H3.3 ctps-1 8363 7.296 0.814 0.910 0.923 0.910 0.977 0.950 0.888 0.924 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
93. W01B11.3 nol-5 23544 7.295 0.951 0.923 0.904 0.923 0.942 0.881 0.879 0.892 NucleOLar protein [Source:RefSeq peptide;Acc:NP_491134]
94. Y37D8A.18 mrps-10 4551 7.295 0.812 0.915 0.934 0.915 0.966 0.960 0.915 0.878 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
95. F29C4.6 tut-1 5637 7.291 0.872 0.921 0.940 0.921 0.959 0.948 0.888 0.842 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
96. Y62E10A.11 mdt-9 5971 7.291 0.840 0.929 0.916 0.929 0.976 0.941 0.878 0.882 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
97. W08D2.7 mtr-4 2699 7.287 0.838 0.961 0.936 0.961 0.936 0.932 0.896 0.827 mRNA transport homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23223]
98. F23B2.13 rpb-12 2738 7.287 0.815 0.933 0.878 0.933 0.962 0.938 0.930 0.898 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_001294129]
99. F53G2.7 mnat-1 10966 7.283 0.930 0.910 0.906 0.910 0.972 0.936 0.855 0.864 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
100. K08F11.3 cif-1 10218 7.281 0.856 0.900 0.927 0.900 0.912 0.953 0.896 0.937 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA