C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y56A3A.22

Gene ID Gene Name Reads Transcripts Annotation
Y56A3A.22 Y56A3A.22 2747 Y56A3A.22

Genes with expression patterns similar to Y56A3A.22

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y56A3A.22 Y56A3A.22 2747 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. H06H21.3 eif-1.A 40990 7.689 0.965 0.947 0.955 0.947 0.978 0.982 0.950 0.965 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
3. F39B2.2 uev-1 13597 7.678 0.946 0.955 0.970 0.955 0.991 0.968 0.965 0.928 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
4. F39B2.10 dnj-12 35162 7.654 0.970 0.943 0.937 0.943 0.980 0.978 0.945 0.958 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493570]
5. F35G12.2 idhg-1 30065 7.65 0.954 0.942 0.942 0.942 0.970 0.983 0.959 0.958 Isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_497927]
6. B0205.7 kin-3 29775 7.636 0.960 0.935 0.949 0.935 0.970 0.989 0.953 0.945 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
7. T27F7.3 eif-1 28176 7.629 0.965 0.922 0.945 0.922 0.984 0.980 0.968 0.943 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
8. Y73B6BL.6 sqd-1 41708 7.629 0.948 0.949 0.949 0.949 0.963 0.972 0.948 0.951 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
9. C33A12.3 C33A12.3 8034 7.628 0.975 0.949 0.942 0.949 0.978 0.962 0.894 0.979
10. K05C4.1 pbs-5 17648 7.621 0.948 0.957 0.925 0.957 0.985 0.976 0.917 0.956 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493558]
11. B0511.10 eif-3.E 10041 7.616 0.966 0.959 0.910 0.959 0.966 0.971 0.953 0.932 Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
12. Y38A8.2 pbs-3 18117 7.614 0.935 0.946 0.929 0.946 0.985 0.987 0.934 0.952 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
13. M117.2 par-5 64868 7.609 0.970 0.921 0.940 0.921 0.968 0.979 0.951 0.959 14-3-3-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41932]
14. F21C3.3 hint-1 7078 7.605 0.975 0.931 0.915 0.931 0.974 0.976 0.948 0.955 Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P53795]
15. C47B2.4 pbs-2 19805 7.604 0.954 0.946 0.920 0.946 0.990 0.980 0.940 0.928 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_493271]
16. C08B11.7 ubh-4 3186 7.603 0.978 0.970 0.931 0.970 0.966 0.953 0.916 0.919 Probable ubiquitin carboxyl-terminal hydrolase ubh-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09444]
17. F25G6.9 F25G6.9 3071 7.599 0.958 0.939 0.954 0.939 0.972 0.970 0.959 0.908
18. K04G2.1 iftb-1 12590 7.597 0.956 0.939 0.934 0.939 0.982 0.967 0.962 0.918 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
19. Y54E2A.11 eif-3.B 13795 7.594 0.945 0.941 0.950 0.941 0.968 0.951 0.955 0.943 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
20. T01G9.6 kin-10 27360 7.594 0.941 0.956 0.953 0.956 0.976 0.979 0.917 0.916 Casein kinase II subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P28548]
21. F38H4.9 let-92 25368 7.593 0.952 0.962 0.952 0.962 0.978 0.958 0.900 0.929 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
22. Y116A8C.35 uaf-2 13808 7.592 0.951 0.955 0.937 0.955 0.978 0.968 0.932 0.916 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
23. T27E9.7 abcf-2 40273 7.59 0.938 0.931 0.937 0.931 0.977 0.973 0.946 0.957 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
24. Y62E10A.10 emc-3 8138 7.59 0.955 0.959 0.930 0.959 0.967 0.958 0.956 0.906 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_502575]
25. C34E10.1 gop-3 11393 7.588 0.934 0.961 0.952 0.961 0.965 0.981 0.929 0.905 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
26. C41D11.2 eif-3.H 7520 7.585 0.968 0.938 0.950 0.938 0.969 0.962 0.954 0.906 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
27. F33D11.11 vpr-1 18001 7.582 0.901 0.957 0.944 0.957 0.976 0.988 0.940 0.919 Major sperm protein [Source:RefSeq peptide;Acc:NP_491704]
28. Y102A5A.1 cand-1 11808 7.579 0.958 0.934 0.933 0.934 0.966 0.981 0.931 0.942 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
29. ZK616.6 perm-3 16186 7.579 0.949 0.961 0.941 0.961 0.946 0.956 0.969 0.896 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
30. C17E4.5 pabp-2 12843 7.576 0.944 0.963 0.938 0.963 0.961 0.968 0.916 0.923 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
31. Y113G7B.23 swsn-1 13766 7.574 0.916 0.959 0.924 0.959 0.965 0.979 0.949 0.923 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
32. Y49E10.2 glrx-5 9672 7.573 0.954 0.942 0.932 0.942 0.971 0.976 0.929 0.927 Glutaredoxin [Source:RefSeq peptide;Acc:NP_499610]
33. D2013.7 eif-3.F 21004 7.573 0.959 0.929 0.947 0.929 0.969 0.960 0.947 0.933 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
34. T05H4.6 erfa-1 12542 7.569 0.958 0.948 0.937 0.948 0.949 0.956 0.957 0.916 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
35. Y40B1B.5 eif-3.J 15061 7.565 0.955 0.941 0.944 0.941 0.970 0.963 0.949 0.902 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
36. F57B9.5 byn-1 58236 7.565 0.947 0.933 0.927 0.933 0.975 0.972 0.962 0.916 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
37. T20D3.8 T20D3.8 6782 7.563 0.959 0.947 0.913 0.947 0.980 0.976 0.928 0.913
38. F39H11.5 pbs-7 13631 7.561 0.920 0.954 0.914 0.954 0.983 0.970 0.954 0.912 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
39. T12D8.8 hip-1 18283 7.56 0.943 0.932 0.919 0.932 0.985 0.968 0.953 0.928 Hsp-70 Interacting Protein homolog [Source:RefSeq peptide;Acc:NP_499811]
40. F39B2.11 mtx-1 8526 7.559 0.933 0.970 0.933 0.970 0.955 0.975 0.940 0.883 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
41. F23H11.3 sucl-2 9009 7.559 0.946 0.944 0.927 0.944 0.982 0.965 0.961 0.890 SUCcinyl-CoA Ligase, alpha subunit [Source:RefSeq peptide;Acc:NP_497288]
42. T08B2.9 fars-1 12650 7.556 0.955 0.950 0.964 0.950 0.929 0.956 0.951 0.901 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
43. T17E9.2 nmt-1 8017 7.555 0.976 0.964 0.952 0.964 0.958 0.935 0.922 0.884 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
44. K08D12.1 pbs-1 21677 7.554 0.942 0.955 0.904 0.955 0.959 0.972 0.925 0.942 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
45. Y54E10A.9 vbh-1 28746 7.553 0.955 0.932 0.936 0.932 0.979 0.964 0.947 0.908 Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
46. Y65B4BR.5 icd-2 58321 7.551 0.952 0.926 0.946 0.926 0.960 0.958 0.955 0.928 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
47. C18D11.4 rsp-8 18308 7.55 0.922 0.948 0.948 0.948 0.975 0.972 0.954 0.883 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
48. F10D11.1 sod-2 7480 7.549 0.959 0.925 0.955 0.925 0.971 0.988 0.909 0.917 Superoxide dismutase [Mn] 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P31161]
49. T12D8.6 mlc-5 19567 7.548 0.931 0.935 0.944 0.935 0.983 0.976 0.920 0.924 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
50. T06D8.6 cchl-1 26292 7.548 0.923 0.948 0.953 0.948 0.974 0.931 0.930 0.941 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
51. F26F4.10 rars-1 9971 7.548 0.930 0.946 0.935 0.946 0.963 0.964 0.946 0.918 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
52. R05D11.3 ran-4 15494 7.546 0.953 0.955 0.948 0.955 0.950 0.963 0.921 0.901 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
53. Y111B2A.18 rsp-3 43731 7.545 0.937 0.945 0.941 0.945 0.972 0.951 0.964 0.890 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
54. T20F5.2 pbs-4 8985 7.541 0.957 0.958 0.921 0.958 0.962 0.938 0.906 0.941 Proteasome subunit beta type-2 [Source:UniProtKB/Swiss-Prot;Acc:P91477]
55. R07G3.5 pgam-5 11646 7.54 0.926 0.945 0.935 0.945 0.958 0.963 0.947 0.921 Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
56. H19N07.1 erfa-3 19869 7.538 0.957 0.962 0.958 0.962 0.958 0.964 0.904 0.873 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
57. ZK809.5 ZK809.5 5228 7.537 0.952 0.946 0.931 0.946 0.952 0.966 0.924 0.920
58. K01C8.10 cct-4 15077 7.536 0.924 0.955 0.935 0.955 0.947 0.940 0.943 0.937 T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:P47208]
59. M7.1 let-70 85699 7.534 0.929 0.923 0.950 0.923 0.957 0.964 0.936 0.952 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
60. F08F8.3 kap-1 31437 7.529 0.949 0.933 0.932 0.933 0.971 0.965 0.935 0.911 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
61. F19B6.2 ufd-1 15357 7.528 0.933 0.936 0.959 0.936 0.962 0.942 0.936 0.924 Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
62. B0035.14 dnj-1 5412 7.526 0.918 0.945 0.941 0.945 0.978 0.957 0.946 0.896 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001263785]
63. T05H10.5 ufd-2 30044 7.525 0.946 0.941 0.956 0.941 0.970 0.969 0.880 0.922 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
64. F31D4.3 fkb-6 21313 7.524 0.957 0.949 0.923 0.949 0.977 0.925 0.926 0.918 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
65. C09G12.9 tsg-101 9451 7.522 0.948 0.949 0.896 0.949 0.949 0.965 0.958 0.908 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
66. C06G3.11 tin-9.1 7773 7.521 0.950 0.943 0.946 0.943 0.949 0.947 0.934 0.909 Mitochondrial import inner membrane translocase subunit Tim9 [Source:UniProtKB/Swiss-Prot;Acc:Q17754]
67. C47D12.6 tars-1 23488 7.516 0.937 0.944 0.955 0.944 0.961 0.951 0.908 0.916 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
68. C36B1.4 pas-4 13140 7.516 0.953 0.946 0.932 0.946 0.974 0.968 0.906 0.891 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
69. Y110A7A.14 pas-3 6831 7.515 0.938 0.949 0.888 0.949 0.973 0.969 0.923 0.926 Proteasome subunit alpha type-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N599]
70. Y47G6A.20 rnp-6 5542 7.513 0.934 0.949 0.896 0.949 0.969 0.958 0.944 0.914 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
71. F22D6.3 nars-1 18624 7.511 0.964 0.972 0.919 0.972 0.955 0.928 0.933 0.868 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
72. T10F2.1 gars-1 7204 7.51 0.928 0.952 0.942 0.952 0.954 0.960 0.918 0.904 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
73. F40G9.3 ubc-20 16785 7.509 0.955 0.929 0.951 0.929 0.955 0.967 0.915 0.908 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_497174]
74. F13G3.4 dylt-1 21345 7.508 0.942 0.957 0.959 0.957 0.932 0.957 0.947 0.857 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
75. T20H4.3 pars-1 8167 7.507 0.923 0.944 0.890 0.944 0.974 0.974 0.940 0.918 Prolyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_001022777]
76. C15H11.4 dhs-22 21674 7.506 0.924 0.953 0.929 0.953 0.960 0.966 0.948 0.873 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
77. Y39A1C.3 cey-4 50694 7.506 0.961 0.921 0.926 0.921 0.962 0.952 0.939 0.924 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
78. Y92C3B.2 uaf-1 14981 7.506 0.927 0.948 0.950 0.948 0.965 0.948 0.905 0.915 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
79. ZK20.3 rad-23 35070 7.503 0.943 0.926 0.935 0.926 0.960 0.971 0.913 0.929
80. M106.4 gmps-1 12232 7.502 0.909 0.943 0.917 0.943 0.955 0.978 0.930 0.927 Probable GMP synthase [glutamine-hydrolyzing] [Source:UniProtKB/Swiss-Prot;Acc:Q09580]
81. F23B12.6 fntb-1 4392 7.501 0.931 0.947 0.911 0.947 0.963 0.959 0.924 0.919 FarNesylTransferase, Beta subunit [Source:RefSeq peptide;Acc:NP_506580]
82. D2005.4 D2005.4 4322 7.501 0.951 0.926 0.917 0.926 0.960 0.969 0.916 0.936
83. F26E4.1 sur-6 16191 7.5 0.889 0.964 0.900 0.964 0.966 0.961 0.944 0.912 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B [Source:RefSeq peptide;Acc:NP_492591]
84. ZK256.1 pmr-1 6290 7.5 0.897 0.967 0.936 0.967 0.961 0.973 0.889 0.910 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_001021860]
85. T16G1.11 eif-3.K 14014 7.499 0.968 0.947 0.972 0.947 0.939 0.930 0.929 0.867 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
86. Y57A10A.18 pqn-87 31844 7.498 0.873 0.947 0.942 0.947 0.974 0.982 0.919 0.914 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_496594]
87. Y56A3A.20 ccf-1 18463 7.497 0.926 0.943 0.926 0.943 0.967 0.974 0.957 0.861 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
88. F58G11.1 letm-1 13414 7.495 0.903 0.939 0.955 0.939 0.959 0.985 0.897 0.918 LETM1 (Leucine zipper, EF-hand, TransMembrane mitochondrial protein) homolog [Source:RefSeq peptide;Acc:NP_506381]
89. Y119D3B.15 dss-1 19116 7.492 0.965 0.928 0.953 0.928 0.966 0.942 0.877 0.933 Probable 26S proteasome complex subunit dss-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y72]
90. F43E2.7 mtch-1 30689 7.492 0.926 0.928 0.965 0.928 0.968 0.947 0.922 0.908 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
91. Y48G8AL.6 smg-2 12561 7.491 0.904 0.958 0.897 0.958 0.971 0.970 0.947 0.886 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
92. K04G7.10 rnp-7 11219 7.491 0.950 0.935 0.930 0.935 0.963 0.967 0.946 0.865 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_498565]
93. Y39G10AR.9 Y39G10AR.9 3972 7.49 0.948 0.930 0.921 0.930 0.955 0.953 0.954 0.899
94. Y63D3A.8 Y63D3A.8 9808 7.489 0.959 0.948 0.939 0.948 0.964 0.950 0.884 0.897
95. ZK637.3 lnkn-1 16095 7.488 0.916 0.958 0.960 0.958 0.942 0.952 0.878 0.924 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
96. Y77E11A.13 npp-20 5777 7.487 0.947 0.935 0.935 0.935 0.973 0.959 0.888 0.915 Protein SEC13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N4A7]
97. W02B12.9 mfn-1 7309 7.487 0.949 0.916 0.927 0.916 0.978 0.961 0.943 0.897 Mitoferrin [Source:UniProtKB/Swiss-Prot;Acc:Q23125]
98. C25H3.8 C25H3.8 7043 7.486 0.932 0.955 0.962 0.955 0.972 0.961 0.875 0.874
99. ZK652.3 ufm-1 12647 7.485 0.935 0.937 0.932 0.937 0.966 0.950 0.901 0.927 Ubiquitin-fold modifier 1 [Source:UniProtKB/Swiss-Prot;Acc:P34661]
100. Y47D3A.29 Y47D3A.29 9472 7.485 0.867 0.924 0.916 0.924 0.974 0.971 0.943 0.966 DNA polymerase [Source:RefSeq peptide;Acc:NP_001255109]

There are 1503 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA