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Results for R07E5.10

Gene ID Gene Name Reads Transcripts Annotation
R07E5.10 pdcd-2 5211 R07E5.10a, R07E5.10b.1, R07E5.10b.2, R07E5.10b.3 Vacuolar ATPase assembly integral membrane protein VMA21 homolog [Source:UniProtKB/Swiss-Prot;Acc:A5JYQ9]

Genes with expression patterns similar to R07E5.10

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R07E5.10 pdcd-2 5211 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Vacuolar ATPase assembly integral membrane protein VMA21 homolog [Source:UniProtKB/Swiss-Prot;Acc:A5JYQ9]
2. ZK637.3 lnkn-1 16095 7.641 0.948 0.975 0.956 0.975 0.960 0.946 0.937 0.944 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
3. Y54G2A.31 ubc-13 22367 7.612 0.947 0.954 0.979 0.954 0.955 0.954 0.949 0.920 Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
4. T26A5.9 dlc-1 59038 7.598 0.945 0.948 0.960 0.948 0.937 0.965 0.922 0.973 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
5. H21P03.1 mbf-1 25586 7.579 0.968 0.955 0.957 0.955 0.950 0.921 0.927 0.946 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
6. T05C12.7 cct-1 41264 7.564 0.953 0.964 0.976 0.964 0.958 0.930 0.883 0.936 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
7. C15H11.4 dhs-22 21674 7.542 0.959 0.962 0.964 0.962 0.928 0.914 0.904 0.949 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
8. Y73B6BL.6 sqd-1 41708 7.536 0.963 0.971 0.970 0.971 0.901 0.929 0.892 0.939 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
9. T03F6.5 lis-1 8818 7.533 0.958 0.969 0.940 0.969 0.954 0.913 0.900 0.930 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
10. F08F8.3 kap-1 31437 7.528 0.973 0.947 0.946 0.947 0.936 0.910 0.911 0.958 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
11. Y79H2A.6 arx-3 17398 7.525 0.949 0.960 0.949 0.960 0.933 0.942 0.872 0.960 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
12. T19A6.3 nepr-1 6606 7.523 0.935 0.967 0.963 0.967 0.911 0.911 0.947 0.922 Nuclear envelope phosphatase-regulatory subunit 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXN3]
13. K07C5.1 arx-2 20142 7.517 0.958 0.966 0.931 0.966 0.962 0.927 0.914 0.893 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
14. R07B7.3 pqn-53 10459 7.514 0.964 0.958 0.959 0.958 0.946 0.926 0.885 0.918 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
15. T24F1.1 raga-1 16171 7.512 0.932 0.959 0.942 0.959 0.955 0.931 0.902 0.932 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
16. T08B2.9 fars-1 12650 7.499 0.956 0.973 0.968 0.973 0.951 0.870 0.879 0.929 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
17. R05D11.3 ran-4 15494 7.499 0.953 0.960 0.962 0.960 0.911 0.904 0.907 0.942 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
18. F38A5.1 odr-8 5283 7.497 0.950 0.964 0.943 0.964 0.941 0.942 0.877 0.916 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
19. C47E12.1 sars-1 4942 7.495 0.920 0.973 0.968 0.973 0.920 0.872 0.939 0.930 Probable serine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q18678]
20. K05C4.11 sol-2 16560 7.493 0.958 0.938 0.958 0.938 0.954 0.944 0.852 0.951 Suppressor Of Lurcher movement defect [Source:RefSeq peptide;Acc:NP_493560]
21. R07G3.1 cdc-42 35737 7.493 0.944 0.960 0.960 0.960 0.873 0.947 0.877 0.972 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
22. C07G2.3 cct-5 44703 7.491 0.947 0.941 0.960 0.941 0.965 0.891 0.911 0.935 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
23. E01A2.2 E01A2.2 12356 7.49 0.950 0.947 0.947 0.947 0.935 0.920 0.913 0.931 Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
24. K11D12.2 pqn-51 15951 7.488 0.961 0.966 0.948 0.966 0.943 0.873 0.921 0.910 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
25. F33D4.7 emc-6 6534 7.485 0.953 0.957 0.956 0.957 0.945 0.907 0.890 0.920 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
26. F47D12.4 hmg-1.2 13779 7.483 0.945 0.965 0.938 0.965 0.923 0.954 0.846 0.947 High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]
27. F54A3.3 cct-3 25183 7.478 0.958 0.939 0.960 0.939 0.948 0.895 0.890 0.949 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
28. C35D10.16 arx-6 8242 7.475 0.945 0.920 0.943 0.920 0.968 0.926 0.931 0.922 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
29. B0285.1 cdk-12 5900 7.474 0.941 0.952 0.946 0.952 0.965 0.924 0.847 0.947 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
30. T05H4.6 erfa-1 12542 7.473 0.976 0.975 0.968 0.975 0.896 0.860 0.897 0.926 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
31. Y39A1C.3 cey-4 50694 7.47 0.950 0.937 0.950 0.937 0.931 0.915 0.903 0.947 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
32. Y71F9AL.16 arx-1 7692 7.465 0.945 0.959 0.947 0.959 0.939 0.940 0.862 0.914 Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I0]
33. W04D2.5 mrps-11 5757 7.462 0.974 0.956 0.965 0.956 0.935 0.867 0.897 0.912 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
34. T05H10.5 ufd-2 30044 7.462 0.960 0.964 0.965 0.964 0.908 0.922 0.853 0.926 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
35. D2096.2 praf-3 18471 7.459 0.961 0.969 0.948 0.969 0.923 0.966 0.826 0.897 Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
36. F53G12.1 rab-11.1 28814 7.459 0.951 0.955 0.946 0.955 0.916 0.950 0.846 0.940 RAB family [Source:RefSeq peptide;Acc:NP_490675]
37. D2013.7 eif-3.F 21004 7.458 0.962 0.946 0.965 0.946 0.932 0.899 0.883 0.925 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
38. T21B10.1 mrpl-50 14595 7.454 0.949 0.966 0.970 0.966 0.965 0.807 0.901 0.930 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
39. F43E2.7 mtch-1 30689 7.448 0.936 0.957 0.958 0.957 0.935 0.888 0.858 0.959 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
40. F13G3.4 dylt-1 21345 7.447 0.947 0.951 0.959 0.951 0.952 0.908 0.882 0.897 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
41. R151.9 pfd-5 6951 7.443 0.967 0.923 0.932 0.923 0.953 0.885 0.910 0.950 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
42. D2024.6 cap-1 13880 7.443 0.953 0.962 0.955 0.962 0.935 0.947 0.850 0.879 F-actin-capping protein subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P34685]
43. ZK863.6 dpy-30 16177 7.44 0.937 0.950 0.947 0.950 0.970 0.875 0.892 0.919 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
44. F08F8.2 hmgr-1 6483 7.44 0.938 0.973 0.954 0.973 0.901 0.928 0.883 0.890 3-hydroxy-3-methylglutaryl coenzyme A reductase [Source:RefSeq peptide;Acc:NP_498626]
45. W08E3.3 ola-1 20885 7.436 0.943 0.928 0.983 0.928 0.951 0.903 0.866 0.934 Obg-like ATPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P91917]
46. F55C5.7 rskd-1 4814 7.435 0.943 0.954 0.904 0.954 0.928 0.962 0.920 0.870 Ribosomal protein S6 Kinase Delta homolog [Source:RefSeq peptide;Acc:NP_506082]
47. C53A5.3 hda-1 18413 7.434 0.912 0.954 0.912 0.954 0.949 0.911 0.942 0.900 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
48. F01F1.8 cct-6 29460 7.434 0.937 0.963 0.975 0.963 0.966 0.815 0.871 0.944 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
49. M7.1 let-70 85699 7.434 0.901 0.945 0.960 0.945 0.898 0.938 0.903 0.944 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
50. C34E10.1 gop-3 11393 7.432 0.964 0.972 0.946 0.972 0.905 0.876 0.831 0.966 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
51. F39B2.2 uev-1 13597 7.428 0.962 0.964 0.943 0.964 0.876 0.923 0.885 0.911 Ubiquitin-conjugating enzyme E2 variant 1 [Source:UniProtKB/Swiss-Prot;Acc:O45495]
52. T10B5.5 cct-7 24616 7.427 0.916 0.958 0.973 0.958 0.949 0.860 0.885 0.928 Chaperonin Containing TCP-1 [Source:RefSeq peptide;Acc:NP_503522]
53. Y37E3.9 phb-1 29211 7.425 0.951 0.946 0.920 0.946 0.961 0.889 0.876 0.936 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
54. Y75B12B.5 cyn-3 34388 7.424 0.955 0.934 0.953 0.934 0.928 0.917 0.864 0.939 Peptidyl-prolyl cis-trans isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:P52011]
55. F26H11.2 nurf-1 13015 7.421 0.925 0.951 0.963 0.951 0.925 0.888 0.897 0.921 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
56. R74.1 lars-1 8467 7.419 0.924 0.940 0.953 0.940 0.945 0.919 0.849 0.949 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
57. Y62E10A.1 rla-2 59665 7.419 0.937 0.936 0.931 0.936 0.941 0.898 0.890 0.950 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
58. B0280.1 ggtb-1 3076 7.416 0.943 0.953 0.903 0.953 0.945 0.961 0.887 0.871 Probable geranylgeranyl transferase type-2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P41992]
59. M106.5 cap-2 11395 7.412 0.949 0.965 0.963 0.965 0.943 0.911 0.827 0.889 F-actin-capping protein subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P34686]
60. Y6D11A.2 arx-4 3777 7.412 0.961 0.969 0.906 0.969 0.937 0.891 0.891 0.888 Probable actin-related protein 2/3 complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8WTM6]
61. C52E4.3 snr-4 19308 7.412 0.962 0.965 0.953 0.965 0.954 0.875 0.827 0.911 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
62. ZK1058.4 ccdc-47 8879 7.411 0.923 0.967 0.966 0.967 0.948 0.860 0.868 0.912 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
63. M01B12.3 arx-7 7584 7.411 0.946 0.922 0.945 0.922 0.937 0.958 0.875 0.906 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
64. C39E9.14 dli-1 5650 7.41 0.926 0.969 0.964 0.969 0.922 0.909 0.828 0.923 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
65. ZK1128.8 vps-29 5118 7.408 0.930 0.948 0.923 0.948 0.921 0.971 0.814 0.953 Vacuolar protein sorting-associated protein 29 [Source:RefSeq peptide;Acc:NP_001022987]
66. F26F4.10 rars-1 9971 7.408 0.927 0.973 0.974 0.973 0.910 0.836 0.885 0.930 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
67. T09A5.11 ostb-1 29365 7.407 0.969 0.975 0.943 0.975 0.924 0.942 0.860 0.819 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P45971]
68. F28H1.3 aars-2 13537 7.401 0.929 0.950 0.976 0.950 0.935 0.864 0.913 0.884 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
69. Y59A8B.22 snx-6 9350 7.401 0.951 0.955 0.966 0.955 0.920 0.951 0.813 0.890 Sorting NeXin [Source:RefSeq peptide;Acc:NP_001256763]
70. T06G6.9 pfd-3 10945 7.398 0.941 0.927 0.929 0.927 0.965 0.894 0.891 0.924 Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:O18054]
71. F53G2.7 mnat-1 10966 7.398 0.883 0.963 0.964 0.963 0.958 0.859 0.884 0.924 MNAT (menage a trois) TFIIH subunit [Source:RefSeq peptide;Acc:NP_494280]
72. T22D1.4 ribo-1 11776 7.398 0.941 0.965 0.976 0.965 0.925 0.918 0.851 0.857 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH4]
73. Y92C3B.3 rab-18 12556 7.398 0.950 0.944 0.937 0.944 0.922 0.954 0.849 0.898 Ras-related protein Rab-18 [Source:UniProtKB/Swiss-Prot;Acc:Q8MXS1]
74. B0205.11 mrpl-9 9162 7.398 0.974 0.966 0.954 0.966 0.964 0.847 0.863 0.864 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
75. D2013.2 wdfy-2 7286 7.397 0.960 0.950 0.939 0.950 0.935 0.864 0.931 0.868 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
76. ZK616.6 perm-3 16186 7.397 0.966 0.973 0.961 0.973 0.919 0.839 0.872 0.894 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
77. F57B9.10 rpn-6.1 20218 7.394 0.922 0.925 0.942 0.925 0.922 0.953 0.864 0.941 Probable 26S proteasome regulatory subunit rpn-6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20938]
78. K07D4.3 rpn-11 8834 7.39 0.908 0.936 0.945 0.936 0.970 0.886 0.895 0.914 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
79. Y65B4A.3 vps-20 8612 7.389 0.938 0.921 0.959 0.921 0.876 0.949 0.889 0.936 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_490762]
80. ZC376.7 atfs-1 7905 7.388 0.903 0.950 0.929 0.950 0.927 0.919 0.890 0.920 Activating Transcription Factor associated with Stress [Source:RefSeq peptide;Acc:NP_506515]
81. C08F8.1 pfd-1 10199 7.387 0.964 0.935 0.931 0.935 0.956 0.862 0.859 0.945 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
82. D2023.6 D2023.6 5595 7.387 0.956 0.971 0.942 0.971 0.909 0.896 0.870 0.872
83. H19N07.1 erfa-3 19869 7.386 0.951 0.974 0.960 0.974 0.924 0.864 0.818 0.921 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
84. Y48A6B.13 spat-2 21773 7.384 0.904 0.940 0.950 0.940 0.939 0.925 0.844 0.942 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
85. Y102A5A.1 cand-1 11808 7.384 0.968 0.957 0.947 0.957 0.905 0.882 0.868 0.900 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
86. C30C11.4 hsp-110 27892 7.382 0.950 0.964 0.955 0.964 0.855 0.878 0.875 0.941 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_498868]
87. Y56A3A.21 trap-4 58702 7.381 0.954 0.942 0.949 0.942 0.905 0.955 0.822 0.912 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
88. C07G2.2 atf-7 17768 7.381 0.937 0.956 0.956 0.956 0.957 0.837 0.887 0.895 ATF (cAMP-dependent transcription factor) family [Source:RefSeq peptide;Acc:NP_497914]
89. F43C1.2 mpk-1 13166 7.379 0.926 0.946 0.927 0.946 0.950 0.916 0.844 0.924 Mitogen-activated protein kinase mpk-1 [Source:UniProtKB/Swiss-Prot;Acc:P39745]
90. T27F7.3 eif-1 28176 7.379 0.948 0.933 0.957 0.933 0.910 0.855 0.887 0.956 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
91. H20J04.5 pfd-2 8082 7.375 0.938 0.936 0.936 0.936 0.961 0.852 0.887 0.929 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
92. T11G6.1 hars-1 7908 7.375 0.956 0.959 0.970 0.959 0.908 0.851 0.851 0.921 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
93. Y54E5B.4 ubc-16 8386 7.373 0.879 0.934 0.897 0.934 0.971 0.913 0.923 0.922 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_493587]
94. Y49A3A.1 cept-2 8916 7.372 0.935 0.926 0.920 0.926 0.961 0.905 0.856 0.943 Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
95. F17C11.9 eef-1G 37911 7.371 0.944 0.943 0.923 0.943 0.931 0.831 0.887 0.969 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
96. F36H1.2 kdin-1 6118 7.371 0.929 0.961 0.957 0.961 0.922 0.915 0.897 0.829 KiDINs220 (vertebrate scaffold protein) homolog [Source:RefSeq peptide;Acc:NP_001040942]
97. C15H11.3 nxf-1 9528 7.368 0.967 0.920 0.903 0.920 0.901 0.926 0.868 0.963 Nuclear RNA export factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS7]
98. Y32H12A.4 szy-2 7927 7.367 0.903 0.952 0.955 0.952 0.946 0.931 0.803 0.925 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_498147]
99. Y37A1B.2 lst-4 11343 7.364 0.853 0.940 0.941 0.940 0.952 0.960 0.930 0.848 Sorting nexin lst-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4E2]
100. H21P03.3 sms-1 7737 7.364 0.868 0.961 0.920 0.961 0.912 0.969 0.903 0.870 Phosphatidylcholine:ceramide cholinephosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3D4]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA