C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R119.6

Gene ID Gene Name Reads Transcripts Annotation
R119.6 taf-4 1100 R119.6 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_490728]

Genes with expression patterns similar to R119.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R119.6 taf-4 1100 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_490728]
2. D1081.8 cdc-5L 8553 7.362 0.950 0.902 0.919 0.902 0.866 0.949 0.920 0.954 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
3. ZK970.3 mdt-22 1925 7.361 0.941 0.904 0.928 0.904 0.909 0.942 0.862 0.971 Mediator of RNA polymerase II transcription subunit 22 [Source:UniProtKB/Swiss-Prot;Acc:Q23679]
4. B0035.3 B0035.3 4118 7.349 0.950 0.899 0.915 0.899 0.855 0.959 0.920 0.952
5. F36A2.1 cids-2 4551 7.326 0.932 0.884 0.869 0.884 0.896 0.961 0.948 0.952 pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
6. Y54E2A.3 tac-1 6308 7.324 0.951 0.904 0.875 0.904 0.903 0.936 0.937 0.914 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
7. F18E2.3 scc-3 13464 7.319 0.961 0.895 0.902 0.895 0.915 0.870 0.937 0.944 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
8. K12D12.2 npp-3 6914 7.302 0.940 0.847 0.950 0.847 0.933 0.930 0.925 0.930 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
9. ZK177.8 ZK177.8 3403 7.3 0.962 0.889 0.901 0.889 0.895 0.934 0.921 0.909
10. C08B11.6 arp-6 4646 7.29 0.916 0.857 0.890 0.857 0.921 0.927 0.956 0.966 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
11. F58A4.8 tbg-1 2839 7.289 0.948 0.904 0.878 0.904 0.934 0.914 0.953 0.854 Tubulin gamma chain [Source:UniProtKB/Swiss-Prot;Acc:P34475]
12. F25B5.2 nop-1 4127 7.286 0.966 0.859 0.924 0.859 0.892 0.936 0.912 0.938 Pseudocleavage protein nop-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09314]
13. F28B3.7 him-1 18274 7.283 0.938 0.885 0.906 0.885 0.891 0.948 0.957 0.873 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
14. Y41D4B.19 npp-8 12992 7.283 0.961 0.908 0.916 0.908 0.804 0.953 0.872 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
15. C53D5.6 imb-3 28921 7.28 0.904 0.898 0.883 0.898 0.907 0.912 0.959 0.919 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
16. F37A4.9 bath-41 2558 7.278 0.942 0.876 0.843 0.876 0.911 0.931 0.943 0.956 BTB and MATH domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:P41886]
17. R13F6.10 cra-1 11610 7.275 0.888 0.889 0.874 0.889 0.888 0.966 0.959 0.922 N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
18. Y46G5A.4 snrp-200 13827 7.27 0.914 0.888 0.909 0.888 0.870 0.965 0.939 0.897 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
19. R119.4 pqn-59 16065 7.265 0.943 0.835 0.933 0.835 0.886 0.944 0.939 0.950 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_490727]
20. F53A3.2 polh-1 2467 7.264 0.933 0.881 0.939 0.881 0.803 0.934 0.925 0.968 POLH (DNA polymerase eta) homolog [Source:RefSeq peptide;Acc:NP_497480]
21. C02B10.5 C02B10.5 9171 7.264 0.953 0.867 0.914 0.867 0.854 0.957 0.938 0.914
22. F22D6.3 nars-1 18624 7.259 0.918 0.884 0.873 0.884 0.909 0.962 0.941 0.888 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
23. C08B11.5 sap-49 10553 7.258 0.899 0.876 0.876 0.876 0.900 0.954 0.933 0.944 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
24. B0547.1 csn-5 3568 7.257 0.896 0.886 0.928 0.886 0.936 0.868 0.958 0.899 COP9 signalosome complex subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P91001]
25. C28H8.9 dpff-1 8684 7.254 0.954 0.850 0.907 0.850 0.934 0.928 0.891 0.940 Zinc finger protein dpff-1 [Source:UniProtKB/Swiss-Prot;Acc:Q09477]
26. T04A8.14 emb-5 11746 7.253 0.952 0.871 0.909 0.871 0.870 0.943 0.925 0.912 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
27. Y39G10AL.3 cdk-7 3495 7.252 0.930 0.890 0.908 0.890 0.886 0.905 0.891 0.952 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
28. T05F1.6 hsr-9 13312 7.251 0.937 0.864 0.933 0.864 0.900 0.900 0.951 0.902
29. Y47D3A.26 smc-3 6256 7.249 0.962 0.904 0.920 0.904 0.800 0.916 0.894 0.949 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
30. F56D1.7 daz-1 23684 7.249 0.919 0.864 0.928 0.864 0.885 0.916 0.954 0.919 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
31. T25G3.3 T25G3.3 7285 7.243 0.931 0.868 0.884 0.868 0.857 0.922 0.961 0.952
32. F35G12.8 smc-4 6202 7.241 0.950 0.906 0.892 0.906 0.919 0.870 0.869 0.929 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
33. T12D8.3 acbp-5 6816 7.241 0.918 0.878 0.884 0.878 0.900 0.898 0.933 0.952 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
34. K01G5.4 ran-1 32379 7.24 0.945 0.888 0.889 0.888 0.864 0.972 0.908 0.886 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
35. C26E6.5 fsn-1 6615 7.239 0.953 0.879 0.937 0.879 0.870 0.857 0.899 0.965 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]
36. F44B9.4 cit-1.1 4631 7.236 0.953 0.827 0.941 0.827 0.910 0.901 0.929 0.948 Cyclin-T1.1 [Source:UniProtKB/Swiss-Prot;Acc:P34425]
37. K02F2.4 ulp-5 3433 7.233 0.862 0.923 0.935 0.923 0.802 0.967 0.849 0.972 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
38. Y47G6A.8 crn-1 3494 7.23 0.905 0.854 0.870 0.854 0.916 0.947 0.929 0.955 Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3T2]
39. ZK507.6 cya-1 6807 7.23 0.942 0.846 0.902 0.846 0.868 0.959 0.914 0.953 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
40. ZK381.1 him-3 4913 7.23 0.896 0.864 0.907 0.864 0.840 0.941 0.946 0.972 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
41. B0464.9 B0464.9 2997 7.229 0.946 0.848 0.906 0.848 0.904 0.967 0.910 0.900 Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
42. Y110A7A.8 prp-31 4436 7.229 0.955 0.881 0.851 0.881 0.895 0.928 0.929 0.909 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
43. Y56A3A.17 npp-16 5391 7.228 0.937 0.880 0.892 0.880 0.882 0.957 0.860 0.940 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
44. K08F11.5 miro-1 4512 7.227 0.955 0.898 0.874 0.898 0.868 0.941 0.919 0.874 Mitochondrial Rho GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94263]
45. F52C9.7 mog-3 9880 7.226 0.954 0.865 0.908 0.865 0.826 0.945 0.916 0.947 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
46. Y18D10A.1 attf-6 6942 7.226 0.878 0.882 0.897 0.882 0.869 0.930 0.953 0.935 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
47. F56A3.3 npp-6 5425 7.223 0.917 0.906 0.903 0.906 0.876 0.859 0.978 0.878 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
48. K02F3.11 rnp-5 6205 7.223 0.940 0.867 0.915 0.867 0.921 0.951 0.878 0.884 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_497276]
49. Y17G9B.3 cyp-31A3 1709 7.221 0.928 0.834 0.914 0.834 0.889 0.934 0.932 0.956 CYtochrome P450 family [Source:RefSeq peptide;Acc:NP_500637]
50. T12D8.2 drr-2 16208 7.22 0.894 0.890 0.874 0.890 0.945 0.917 0.958 0.852 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
51. Y17G7A.1 hmg-12 29989 7.22 0.934 0.872 0.894 0.872 0.813 0.961 0.928 0.946 HMG [Source:RefSeq peptide;Acc:NP_496544]
52. Y54H5A.3 tag-262 4269 7.219 0.907 0.846 0.898 0.846 0.873 0.954 0.936 0.959
53. F23F1.1 nfyc-1 9983 7.217 0.931 0.868 0.886 0.868 0.842 0.954 0.955 0.913 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
54. K02F2.3 teg-4 3873 7.217 0.950 0.865 0.899 0.865 0.885 0.928 0.972 0.853 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_491953]
55. C48E7.3 lpd-2 10330 7.212 0.891 0.873 0.905 0.873 0.882 0.950 0.912 0.926 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
56. F56D2.6 ddx-15 12282 7.211 0.903 0.882 0.897 0.882 0.831 0.967 0.940 0.909 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
57. C43E11.1 acin-1 7781 7.21 0.909 0.888 0.917 0.888 0.893 0.935 0.950 0.830 ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
58. D2030.6 prg-1 26751 7.21 0.871 0.848 0.914 0.848 0.877 0.948 0.936 0.968 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
59. F28C6.6 suf-1 3642 7.209 0.923 0.886 0.870 0.886 0.825 0.958 0.916 0.945 SUppressor-of-Forked (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_495825]
60. T24F1.2 samp-1 8422 7.208 0.929 0.856 0.912 0.856 0.934 0.887 0.880 0.954 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
61. Y38A8.3 ulp-2 7403 7.208 0.941 0.883 0.885 0.883 0.884 0.957 0.885 0.890 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
62. C33H5.12 rsp-6 23342 7.204 0.941 0.868 0.892 0.868 0.899 0.953 0.917 0.866 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
63. T06A10.4 lsy-13 7631 7.204 0.862 0.903 0.899 0.903 0.890 0.955 0.918 0.874
64. T26A5.7 set-1 6948 7.204 0.925 0.836 0.936 0.836 0.872 0.950 0.914 0.935 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
65. W02B12.3 rsp-1 9235 7.202 0.934 0.860 0.901 0.860 0.851 0.964 0.954 0.878 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
66. F35G12.9 apc-11 2538 7.201 0.912 0.855 0.866 0.855 0.900 0.926 0.912 0.975 Anaphase Promoting Complex; see also mat [Source:RefSeq peptide;Acc:NP_497937]
67. C14C10.4 mma-1 3306 7.198 0.944 0.864 0.873 0.864 0.909 0.956 0.906 0.882
68. T17E9.1 kin-18 8172 7.196 0.949 0.855 0.939 0.855 0.962 0.836 0.922 0.878 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
69. F55G1.8 plk-3 12036 7.191 0.933 0.851 0.920 0.851 0.863 0.925 0.883 0.965 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
70. F57B10.11 bag-1 3395 7.189 0.874 0.858 0.936 0.858 0.888 0.951 0.945 0.879 BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:O44739]
71. F32E10.6 cec-5 10643 7.189 0.935 0.866 0.901 0.866 0.852 0.954 0.931 0.884 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
72. T23H2.1 npp-12 12425 7.186 0.934 0.874 0.880 0.874 0.828 0.975 0.887 0.934 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
73. F10G7.3 unc-85 5206 7.185 0.921 0.929 0.878 0.929 0.775 0.958 0.886 0.909 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
74. F10E9.8 sas-4 3703 7.184 0.938 0.867 0.898 0.867 0.843 0.958 0.876 0.937 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
75. ZK1320.12 taf-8 3558 7.184 0.932 0.857 0.927 0.857 0.806 0.893 0.939 0.973 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
76. F09E5.8 F09E5.8 2025 7.184 0.923 0.797 0.920 0.797 0.924 0.930 0.955 0.938 Proline synthase co-transcribed bacterial homolog protein [Source:UniProtKB/Swiss-Prot;Acc:P52057]
77. C36A4.8 brc-1 1664 7.18 0.932 0.845 0.868 0.845 0.872 0.913 0.940 0.965 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_001254881]
78. Y113G7B.5 fog-2 2753 7.179 0.908 0.891 0.927 0.891 0.799 0.917 0.880 0.966 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
79. C09H10.6 nasp-1 6094 7.178 0.943 0.854 0.885 0.854 0.883 0.955 0.891 0.913 NASP (human Nuclear Autoantigenic Sperm Protein) homolog [Source:RefSeq peptide;Acc:NP_496380]
80. M01D7.6 emr-1 4358 7.177 0.870 0.910 0.874 0.910 0.916 0.950 0.928 0.819 Emerin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01971]
81. T05H4.14 gad-1 7979 7.174 0.960 0.855 0.916 0.855 0.860 0.942 0.903 0.883 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
82. F56F3.1 ifet-1 25772 7.174 0.860 0.880 0.921 0.880 0.847 0.956 0.899 0.931 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
83. C43E11.3 met-1 7581 7.171 0.963 0.869 0.913 0.869 0.896 0.898 0.891 0.872 Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_491340]
84. R02D3.8 R02D3.8 1785 7.17 0.915 0.878 0.934 0.878 0.836 0.913 0.848 0.968
85. F32H2.1 snpc-4 7581 7.17 0.920 0.873 0.892 0.873 0.819 0.960 0.910 0.923 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
86. Y80D3A.2 emb-4 3717 7.169 0.896 0.847 0.880 0.847 0.881 0.949 0.907 0.962
87. Y53H1A.5 nfya-2 4166 7.169 0.951 0.848 0.923 0.848 0.898 0.886 0.895 0.920 Nuclear transcription Factor Y, A (alpha) subunit [Source:RefSeq peptide;Acc:NP_001251586]
88. F01G4.5 F01G4.5 2097 7.168 0.889 0.852 0.888 0.852 0.841 0.954 0.945 0.947
89. Y74C9A.4 rcor-1 4686 7.168 0.963 0.825 0.931 0.825 0.921 0.894 0.866 0.943 RCOR (REST CO-Repressor) homolog [Source:RefSeq peptide;Acc:NP_001293207]
90. T23B12.4 natc-1 7759 7.167 0.959 0.895 0.895 0.895 0.940 0.764 0.926 0.893 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
91. T16G1.11 eif-3.K 14014 7.167 0.901 0.893 0.847 0.893 0.893 0.959 0.935 0.846 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
92. F38B7.5 duo-1 3087 7.166 0.881 0.821 0.912 0.821 0.930 0.929 0.915 0.957 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_505931]
93. C16C10.2 C16C10.2 2303 7.166 0.938 0.870 0.903 0.870 0.943 0.787 0.952 0.903 Probable U3 small nucleolar RNA-associated protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q09462]
94. F28H1.3 aars-2 13537 7.163 0.916 0.873 0.904 0.873 0.842 0.965 0.886 0.904 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
95. R12C12.2 ran-5 14517 7.162 0.943 0.866 0.899 0.866 0.827 0.955 0.898 0.908 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
96. C04F5.1 sid-1 2761 7.159 0.936 0.853 0.874 0.853 0.820 0.970 0.932 0.921 Systemic RNA interference defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZC8]
97. ZK742.1 xpo-1 20741 7.159 0.944 0.880 0.893 0.880 0.859 0.963 0.857 0.883 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
98. F08B4.5 pole-2 8234 7.158 0.938 0.867 0.894 0.867 0.876 0.928 0.822 0.966 Probable DNA polymerase epsilon subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19196]
99. C25A1.4 C25A1.4 15507 7.158 0.907 0.877 0.927 0.877 0.813 0.920 0.863 0.974
100. C35D10.7 C35D10.7 2964 7.153 0.868 0.848 0.934 0.848 0.964 0.930 0.927 0.834

There are 597 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA