C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R05D3.9

Gene ID Gene Name Reads Transcripts Annotation
R05D3.9 R05D3.9 858 R05D3.9

Genes with expression patterns similar to R05D3.9

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R05D3.9 R05D3.9 858 7 1.000 1.000 1.000 1.000 1.000 1.000 1.000 -
2. C34B2.8 C34B2.8 15876 6.345 0.842 0.863 0.917 0.863 0.960 0.970 0.930 -
3. ZK177.8 ZK177.8 3403 6.3 0.901 0.821 0.935 0.821 0.972 0.967 0.883 -
4. F26F4.10 rars-1 9971 6.276 0.924 0.808 0.940 0.808 0.944 0.965 0.887 - Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
5. D2030.4 D2030.4 13261 6.275 0.855 0.847 0.919 0.847 0.945 0.965 0.897 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:P90789]
6. W03B1.4 sars-2 2356 6.268 0.816 0.843 0.907 0.843 0.981 0.962 0.916 - Seryl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_500549]
7. B0304.4 B0304.4 382 6.265 0.905 0.788 0.950 0.788 0.952 0.939 0.943 -
8. ZK1058.4 ccdc-47 8879 6.241 0.915 0.798 0.910 0.798 0.967 0.965 0.888 - CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
9. R07E5.11 R07E5.11 1170 6.237 0.916 0.808 0.953 0.808 0.968 0.888 0.896 -
10. C33H5.12 rsp-6 23342 6.231 0.934 0.755 0.933 0.755 0.969 0.976 0.909 - Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
11. Y38E10A.6 ceh-100 5505 6.226 0.850 0.782 0.934 0.782 0.969 0.969 0.940 - C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]
12. F54B3.3 atad-3 9583 6.225 0.860 0.838 0.822 0.838 0.972 0.968 0.927 - ATPase family AAA domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q20748]
13. B0511.7 B0511.7 1070 6.224 0.879 0.779 0.910 0.779 0.976 0.978 0.923 -
14. C46A5.9 hcf-1 6295 6.221 0.921 0.780 0.936 0.780 0.986 0.932 0.886 - human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
15. Y38A8.3 ulp-2 7403 6.221 0.902 0.761 0.950 0.761 0.969 0.966 0.912 - Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
16. F56D2.6 ddx-15 12282 6.219 0.870 0.769 0.931 0.769 0.965 0.984 0.931 - Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
17. Y71G12B.9 lin-65 7476 6.219 0.920 0.747 0.942 0.747 0.976 0.978 0.909 - LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
18. F57A10.3 haf-3 6896 6.217 0.887 0.795 0.924 0.795 0.955 0.953 0.908 - HAlF transporter (PGP related) [Source:RefSeq peptide;Acc:NP_506927]
19. Y110A7A.19 let-630 3830 6.214 0.900 0.797 0.943 0.797 0.968 0.926 0.883 -
20. T21B10.4 T21B10.4 11648 6.211 0.922 0.753 0.927 0.753 0.974 0.946 0.936 -
21. Y56A3A.29 ung-1 1900 6.21 0.909 0.759 0.943 0.759 0.977 0.958 0.905 - Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
22. F36A2.1 cids-2 4551 6.204 0.915 0.766 0.952 0.766 0.944 0.964 0.897 - pol II C-terminal Interaction Domain Suppressor [Source:RefSeq peptide;Acc:NP_492380]
23. C17E4.10 C17E4.10 7034 6.201 0.942 0.762 0.936 0.762 0.924 0.958 0.917 -
24. F28B3.8 imb-1 7515 6.198 0.923 0.760 0.937 0.760 0.980 0.946 0.892 - IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
25. Y69A2AR.3 Y69A2AR.3 12519 6.198 0.893 0.819 0.874 0.819 0.950 0.963 0.880 -
26. Y34D9A.1 mrpl-38 5291 6.197 0.906 0.752 0.925 0.752 0.945 0.985 0.932 - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
27. F54C1.2 dom-3 1244 6.194 0.899 0.812 0.928 0.812 0.931 0.951 0.861 - Decapping nuclease dom-3 [Source:UniProtKB/Swiss-Prot;Acc:Q10660]
28. M01G5.3 M01G5.3 1834 6.192 0.841 0.793 0.919 0.793 0.989 0.961 0.896 -
29. F58E10.3 ddx-17 15107 6.187 0.942 0.758 0.936 0.758 0.965 0.958 0.870 - DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
30. C06A1.5 rpb-6 7515 6.187 0.896 0.762 0.922 0.762 0.987 0.962 0.896 - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
31. F58D5.1 hrp-2 17211 6.181 0.912 0.745 0.923 0.745 0.960 0.979 0.917 - human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
32. Y51H1A.6 mcd-1 3250 6.181 0.914 0.737 0.903 0.737 0.973 0.986 0.931 - Modifier of Cell Death phenotype [Source:RefSeq peptide;Acc:NP_001254412]
33. T25G3.4 T25G3.4 9394 6.179 0.879 0.758 0.938 0.758 0.974 0.983 0.889 - Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
34. H20J04.2 athp-2 5149 6.179 0.926 0.768 0.940 0.768 0.913 0.960 0.904 - AT Hook plus PHD finger transcription factor [Source:RefSeq peptide;Acc:NP_494767]
35. H19N07.1 erfa-3 19869 6.176 0.883 0.772 0.948 0.772 0.948 0.968 0.885 - Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
36. F37C12.13 exos-9 2660 6.175 0.848 0.788 0.919 0.788 0.965 0.966 0.901 - EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_741217]
37. T08B2.9 fars-1 12650 6.174 0.879 0.777 0.904 0.777 0.969 0.967 0.901 - Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
38. F23F1.1 nfyc-1 9983 6.171 0.914 0.716 0.936 0.716 0.989 0.983 0.917 - Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
39. C04F5.1 sid-1 2761 6.17 0.965 0.778 0.914 0.778 0.942 0.980 0.813 - Systemic RNA interference defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZC8]
40. C34E10.5 prmt-5 12277 6.17 0.856 0.760 0.940 0.760 0.963 0.973 0.918 - Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
41. F57B10.11 bag-1 3395 6.164 0.895 0.760 0.912 0.760 0.967 0.974 0.896 - BAG family molecular chaperone regulator 1 [Source:UniProtKB/Swiss-Prot;Acc:O44739]
42. Y74C10AR.3 abtm-1 4152 6.164 0.865 0.795 0.921 0.795 0.936 0.957 0.895 - ABC Transporter, Mitochondrial [Source:RefSeq peptide;Acc:NP_001293285]
43. F10C2.2 kup-1 3852 6.163 0.928 0.744 0.932 0.744 0.966 0.931 0.918 -
44. F10E9.7 F10E9.7 1842 6.163 0.900 0.730 0.943 0.730 0.977 0.953 0.930 -
45. C52E4.6 cyl-1 6405 6.162 0.914 0.742 0.931 0.742 0.957 0.966 0.910 - CYclin L [Source:RefSeq peptide;Acc:NP_506007]
46. F32E10.6 cec-5 10643 6.161 0.932 0.703 0.950 0.703 0.959 0.965 0.949 - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
47. ZK616.6 perm-3 16186 6.161 0.866 0.808 0.931 0.808 0.936 0.970 0.842 - PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
48. C45B11.1 pak-2 6114 6.16 0.919 0.764 0.891 0.764 0.968 0.940 0.914 - Serine/threonine-protein kinase pak-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFU0]
49. C17G10.4 cdc-14 6262 6.159 0.894 0.763 0.950 0.763 0.970 0.945 0.874 - Probable tyrosine-protein phosphatase cdc-14 [Source:UniProtKB/Swiss-Prot;Acc:P81299]
50. ZK686.4 snu-23 9040 6.157 0.917 0.724 0.915 0.724 0.966 0.964 0.947 - Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
51. Y105E8A.17 ekl-4 4732 6.156 0.905 0.751 0.931 0.751 0.924 0.955 0.939 -
52. F37D6.1 mus-101 1886 6.156 0.890 0.790 0.921 0.790 0.964 0.939 0.862 -
53. C49H3.8 arp-11 1815 6.156 0.847 0.780 0.916 0.780 0.953 0.974 0.906 - Actin-Related Proteins [Source:RefSeq peptide;Acc:NP_501314]
54. F33D4.5 mrpl-1 5337 6.156 0.848 0.742 0.941 0.742 0.990 0.967 0.926 - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
55. F22D6.3 nars-1 18624 6.156 0.904 0.740 0.943 0.740 0.958 0.986 0.885 - Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
56. B0464.9 B0464.9 2997 6.155 0.933 0.732 0.905 0.732 0.957 0.982 0.914 - Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
57. B0035.11 leo-1 2968 6.155 0.868 0.759 0.929 0.759 0.942 0.954 0.944 - RNA polymerase-associated protein LEO1 [Source:UniProtKB/Swiss-Prot;Acc:Q17431]
58. Y54H5A.3 tag-262 4269 6.155 0.916 0.738 0.910 0.738 0.951 0.966 0.936 -
59. ZK353.1 cyy-1 5745 6.155 0.916 0.786 0.890 0.786 0.970 0.951 0.856 - Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
60. R02D3.8 R02D3.8 1785 6.154 0.920 0.747 0.938 0.747 0.972 0.922 0.908 -
61. F33D4.7 emc-6 6534 6.154 0.863 0.805 0.946 0.805 0.955 0.946 0.834 - EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
62. C06G3.11 tin-9.1 7773 6.153 0.875 0.808 0.867 0.808 0.938 0.962 0.895 - Mitochondrial import inner membrane translocase subunit Tim9 [Source:UniProtKB/Swiss-Prot;Acc:Q17754]
63. T16G1.11 eif-3.K 14014 6.153 0.887 0.745 0.935 0.745 0.952 0.982 0.907 - Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
64. ZC404.8 spn-4 45220 6.153 0.870 0.808 0.805 0.808 0.982 0.968 0.912 - PIP-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF02]
65. Y54G9A.7 Y54G9A.7 6281 6.151 0.907 0.731 0.909 0.731 0.988 0.957 0.928 - 2O16; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EC67]
66. F37E3.1 ncbp-1 5649 6.151 0.926 0.761 0.922 0.761 0.910 0.962 0.909 - Nuclear cap-binding protein subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O01763]
67. R12C12.2 ran-5 14517 6.151 0.922 0.706 0.940 0.706 0.969 0.957 0.951 - associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
68. F25B3.6 rtfo-1 11965 6.151 0.916 0.728 0.919 0.728 0.982 0.962 0.916 - RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
69. Y37D8A.9 mrg-1 14369 6.15 0.915 0.740 0.915 0.740 0.981 0.982 0.877 - human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
70. D2030.8 D2030.8 2645 6.15 0.860 0.738 0.949 0.738 0.959 0.968 0.938 -
71. T22C1.3 T22C1.3 2305 6.15 0.914 0.760 0.931 0.760 0.977 0.909 0.899 -
72. W06E11.4 sbds-1 6701 6.149 0.924 0.732 0.951 0.732 0.973 0.968 0.869 - Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
73. W01G7.3 rpb-11 7826 6.149 0.891 0.735 0.939 0.735 0.960 0.983 0.906 - Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
74. F57B10.5 F57B10.5 10176 6.148 0.846 0.796 0.925 0.796 0.969 0.924 0.892 -
75. F59E12.2 zyg-1 1718 6.148 0.876 0.761 0.901 0.761 0.963 0.951 0.935 - Probable serine/threonine-protein kinase zyg-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GT24]
76. ZC434.7 ZC434.7 2308 6.147 0.917 0.792 0.905 0.792 0.964 0.941 0.836 -
77. ZK973.11 ZK973.11 2422 6.145 0.900 0.800 0.908 0.800 0.952 0.955 0.830 -
78. T02G5.9 kars-1 9763 6.145 0.837 0.795 0.915 0.795 0.982 0.984 0.837 - Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
79. F26A3.4 F26A3.4 11358 6.145 0.831 0.811 0.903 0.811 0.960 0.899 0.930 -
80. C01B10.9 C01B10.9 4049 6.145 0.921 0.747 0.957 0.747 0.981 0.958 0.834 -
81. K08F11.3 cif-1 10218 6.144 0.889 0.754 0.910 0.754 0.958 0.976 0.903 - COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
82. Y46G5A.4 snrp-200 13827 6.144 0.881 0.723 0.931 0.723 0.970 0.981 0.935 - Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
83. M01D7.6 emr-1 4358 6.144 0.886 0.744 0.939 0.744 0.943 0.976 0.912 - Emerin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01971]
84. F54A3.5 F54A3.5 12028 6.144 0.819 0.829 0.875 0.829 0.971 0.952 0.869 - MICOS complex subunit Mic10 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4K0]
85. ZK742.1 xpo-1 20741 6.143 0.935 0.723 0.931 0.723 0.982 0.965 0.884 - eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
86. C16C10.6 ccdc-55 3581 6.142 0.877 0.716 0.948 0.716 0.972 0.972 0.941 - Nuclear speckle splicing regulatory protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09252]
87. F32A7.5 maph-1.1 5695 6.14 0.921 0.770 0.908 0.770 0.971 0.900 0.900 - Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_001021436]
88. F28H1.3 aars-2 13537 6.14 0.923 0.731 0.935 0.731 0.975 0.977 0.868 - Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
89. F18C5.2 wrn-1 3792 6.14 0.879 0.732 0.922 0.732 0.987 0.948 0.940 - Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
90. T07G12.6 zim-1 1330 6.138 0.795 0.800 0.917 0.800 0.958 0.947 0.921 - Zinc finger In Meiosis [Source:RefSeq peptide;Acc:NP_501948]
91. F55F8.3 F55F8.3 2107 6.138 0.727 0.807 0.932 0.807 0.958 0.964 0.943 - Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
92. F25H9.7 F25H9.7 2281 6.132 0.846 0.822 0.955 0.822 0.963 0.926 0.798 -
93. T21D12.3 pqbp-1.1 5755 6.131 0.906 0.739 0.964 0.739 0.940 0.962 0.881 - PQBP1 (polyglutamine tract-binding neurodegeneration protein) homolog [Source:RefSeq peptide;Acc:NP_499890]
94. H43I07.3 H43I07.3 5227 6.131 0.892 0.794 0.956 0.794 0.881 0.958 0.856 -
95. R53.2 dtmk-1 6821 6.131 0.926 0.704 0.948 0.704 0.977 0.959 0.913 - Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
96. T11G6.1 hars-1 7908 6.13 0.876 0.737 0.943 0.737 0.948 0.985 0.904 - Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
97. ZK686.3 ZK686.3 23487 6.127 0.861 0.803 0.898 0.803 0.950 0.920 0.892 - Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34669]
98. Y56A3A.17 npp-16 5391 6.127 0.952 0.694 0.920 0.694 0.967 0.972 0.928 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
99. C48E7.3 lpd-2 10330 6.126 0.891 0.756 0.941 0.756 0.926 0.959 0.897 - LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
100. F02A9.6 glp-1 5613 6.126 0.884 0.742 0.940 0.742 0.931 0.961 0.926 -

There are 1385 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA