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Results for R06C1.1

Gene ID Gene Name Reads Transcripts Annotation
R06C1.1 hda-3 1998 R06C1.1.1, R06C1.1.2 Histone deacetylase [Source:RefSeq peptide;Acc:NP_493026]

Genes with expression patterns similar to R06C1.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R06C1.1 hda-3 1998 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Histone deacetylase [Source:RefSeq peptide;Acc:NP_493026]
2. C25A1.5 C25A1.5 9135 7.673 0.945 0.963 0.970 0.963 0.973 0.965 0.971 0.923
3. K12D12.1 top-2 18694 7.673 0.942 0.964 0.955 0.964 0.974 0.977 0.948 0.949 Probable DNA topoisomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23670]
4. B0334.5 B0334.5 4713 7.659 0.932 0.963 0.946 0.963 0.970 0.943 0.969 0.973
5. C14B9.4 plk-1 18785 7.653 0.933 0.960 0.974 0.960 0.952 0.970 0.930 0.974 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]
6. ZK328.5 npp-10 7652 7.646 0.949 0.966 0.956 0.966 0.977 0.955 0.947 0.930 Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96 [Source:UniProtKB/Swiss-Prot;Acc:G5EEH9]
7. F18E2.3 scc-3 13464 7.644 0.959 0.967 0.954 0.967 0.966 0.926 0.947 0.958 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
8. C08C3.4 cyk-7 12075 7.632 0.946 0.947 0.967 0.947 0.968 0.947 0.951 0.959 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
9. F56A3.3 npp-6 5425 7.625 0.971 0.966 0.963 0.966 0.959 0.968 0.903 0.929 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_740844]
10. F17C11.10 F17C11.10 4355 7.614 0.949 0.952 0.945 0.952 0.966 0.979 0.943 0.928
11. Y55D9A.1 efa-6 10012 7.612 0.922 0.965 0.971 0.965 0.952 0.960 0.942 0.935 Exchange Factor for Arf [Source:RefSeq peptide;Acc:NP_502417]
12. D2089.1 rsp-7 11057 7.61 0.929 0.966 0.962 0.966 0.984 0.952 0.895 0.956 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
13. T06D8.6 cchl-1 26292 7.607 0.930 0.968 0.962 0.968 0.977 0.951 0.928 0.923 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
14. Y71D11A.2 smr-1 4976 7.607 0.940 0.965 0.956 0.965 0.968 0.962 0.900 0.951 SMN (Survival of Motor Neuron protein) Related [Source:RefSeq peptide;Acc:NP_001022932]
15. K08D12.1 pbs-1 21677 7.606 0.951 0.972 0.960 0.972 0.961 0.935 0.919 0.936 Proteasome subunit beta type [Source:RefSeq peptide;Acc:NP_500125]
16. F41E6.4 smk-1 22394 7.604 0.937 0.963 0.940 0.963 0.959 0.955 0.945 0.942 SMEK (Dictyostelium Suppressor of MEK null) homolog [Source:RefSeq peptide;Acc:NP_001023911]
17. EEED8.7 rsp-4 13043 7.602 0.942 0.947 0.970 0.947 0.939 0.964 0.921 0.972 Probable splicing factor, arginine/serine-rich 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09511]
18. C09G4.3 cks-1 17852 7.6 0.944 0.951 0.971 0.951 0.954 0.955 0.916 0.958 Cyclin-dependent kinases regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q17868]
19. F38A5.13 dnj-11 19678 7.599 0.933 0.966 0.942 0.966 0.969 0.941 0.924 0.958 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_501006]
20. C29E4.2 kle-2 5527 7.598 0.938 0.952 0.940 0.952 0.965 0.961 0.944 0.946 Kleisin, abnormal closure, protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34341]
21. R06F6.5 npp-19 5067 7.595 0.904 0.970 0.980 0.970 0.986 0.925 0.948 0.912 Nucleoporin NUP53 [Source:UniProtKB/Swiss-Prot;Acc:Q09601]
22. Y54G9A.6 bub-3 9123 7.595 0.939 0.964 0.960 0.964 0.943 0.925 0.930 0.970 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
23. T05G5.3 cdk-1 14112 7.594 0.966 0.958 0.962 0.958 0.952 0.909 0.953 0.936 Cyclin-dependent kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:P34556]
24. T23B12.4 natc-1 7759 7.591 0.947 0.964 0.965 0.964 0.957 0.905 0.928 0.961 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_505179]
25. F37A4.8 isw-1 9337 7.588 0.973 0.955 0.950 0.955 0.962 0.955 0.895 0.943 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
26. Y49E10.19 ani-1 12757 7.587 0.941 0.969 0.982 0.969 0.954 0.943 0.925 0.904 Anillin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTT4]
27. C13B4.2 usp-14 9000 7.583 0.957 0.949 0.962 0.949 0.957 0.916 0.958 0.935 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
28. W05B10.1 his-74 21926 7.583 0.952 0.957 0.970 0.957 0.950 0.952 0.939 0.906 Histone H3.3-like type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27532]
29. T20F5.7 T20F5.7 5210 7.578 0.948 0.939 0.959 0.939 0.979 0.962 0.903 0.949
30. F55B12.3 sel-10 10304 7.575 0.941 0.966 0.955 0.966 0.929 0.942 0.929 0.947 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
31. D1081.9 D1081.9 3792 7.573 0.940 0.964 0.943 0.964 0.962 0.963 0.950 0.887
32. F59B2.7 rab-6.1 10749 7.572 0.934 0.949 0.960 0.949 0.977 0.907 0.937 0.959 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
33. W03F9.5 ttb-1 8682 7.571 0.938 0.972 0.957 0.972 0.967 0.957 0.888 0.920 Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
34. Y43C5A.6 rad-51 5327 7.57 0.957 0.951 0.943 0.951 0.973 0.955 0.919 0.921 RAD51 short isoform; RecA/Rad51/Dmc1-like protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGG8]
35. D1007.7 nrd-1 6738 7.567 0.940 0.962 0.968 0.962 0.952 0.949 0.949 0.885 NRD (yeast Nuclear pre-mRNA Down-regulation) homolog [Source:RefSeq peptide;Acc:NP_491403]
36. Y92C3B.2 uaf-1 14981 7.566 0.929 0.947 0.958 0.947 0.958 0.941 0.956 0.930 Splicing factor U2AF 65 kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:P90978]
37. F35G12.8 smc-4 6202 7.566 0.940 0.958 0.950 0.958 0.948 0.971 0.922 0.919 Structural maintenance of chromosomes protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20060]
38. F58B6.3 par-2 3914 7.563 0.927 0.961 0.953 0.961 0.977 0.961 0.916 0.907
39. Y113G7B.23 swsn-1 13766 7.562 0.948 0.969 0.942 0.969 0.958 0.929 0.915 0.932 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
40. B0348.6 ife-3 26859 7.56 0.904 0.960 0.965 0.960 0.936 0.948 0.949 0.938 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
41. T17E9.1 kin-18 8172 7.56 0.953 0.963 0.963 0.963 0.939 0.936 0.921 0.922 Serine/threonine-protein kinase SULU [Source:UniProtKB/Swiss-Prot;Acc:P46549]
42. T20H4.4 adr-2 5495 7.559 0.946 0.937 0.930 0.937 0.964 0.937 0.954 0.954 Probable double-stranded RNA-specific adenosine deaminase [Source:UniProtKB/Swiss-Prot;Acc:Q22618]
43. T01G1.3 sec-31 10504 7.558 0.939 0.963 0.952 0.963 0.975 0.963 0.888 0.915 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502144]
44. Y53C12A.4 mop-25.2 7481 7.557 0.929 0.965 0.966 0.965 0.973 0.944 0.907 0.908 MO25-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O18211]
45. F11A10.1 lex-1 13720 7.556 0.943 0.961 0.966 0.961 0.943 0.908 0.949 0.925 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
46. K07C5.8 cash-1 10523 7.555 0.960 0.955 0.949 0.955 0.930 0.956 0.897 0.953 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
47. R06C7.1 wago-1 4303 7.554 0.933 0.936 0.944 0.936 0.961 0.968 0.956 0.920 Argonaute protein wago-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21770]
48. C17E4.5 pabp-2 12843 7.553 0.931 0.945 0.963 0.945 0.976 0.952 0.936 0.905 PolyA Binding Protein (nuclear) [Source:RefSeq peptide;Acc:NP_492504]
49. K02F2.1 dpf-3 11465 7.552 0.954 0.955 0.964 0.955 0.970 0.957 0.938 0.859 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
50. C09G4.1 hyl-1 8815 7.551 0.899 0.961 0.945 0.961 0.977 0.963 0.921 0.924 Ceramide synthase hyl-1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED45]
51. F57C2.6 spat-1 5615 7.551 0.932 0.965 0.948 0.965 0.939 0.934 0.952 0.916 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001254434]
52. F46F11.10 F46F11.10 968 7.551 0.942 0.938 0.956 0.938 0.947 0.928 0.927 0.975
53. F26H11.1 kbp-3 4177 7.547 0.942 0.919 0.975 0.919 0.948 0.960 0.927 0.957 Kinetochore-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O45406]
54. T05F1.6 hsr-9 13312 7.546 0.959 0.962 0.964 0.962 0.963 0.944 0.884 0.908
55. ZK287.5 rbx-1 13546 7.546 0.959 0.955 0.965 0.955 0.948 0.928 0.911 0.925 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
56. C02F5.9 pbs-6 20120 7.544 0.924 0.968 0.957 0.968 0.942 0.923 0.913 0.949 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
57. C36B1.4 pas-4 13140 7.543 0.885 0.952 0.963 0.952 0.973 0.951 0.942 0.925 Proteasome subunit alpha type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q95005]
58. F57B1.2 sun-1 5721 7.542 0.930 0.959 0.943 0.959 0.954 0.961 0.905 0.931 Sun domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20924]
59. C07G1.4 wsp-1 11226 7.54 0.952 0.967 0.963 0.967 0.913 0.935 0.898 0.945 WASP (actin cytoskeleton modulator) homolog [Source:RefSeq peptide;Acc:NP_741459]
60. T01G9.4 npp-2 5361 7.539 0.945 0.971 0.961 0.971 0.948 0.886 0.903 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
61. F53G2.6 tsr-1 4088 7.539 0.884 0.943 0.966 0.943 0.970 0.964 0.941 0.928 Transporter of SR proteins [Source:RefSeq peptide;Acc:NP_494279]
62. ZK1127.12 ZK1127.12 2029 7.538 0.923 0.941 0.948 0.941 0.962 0.966 0.945 0.912
63. Y56A3A.1 ntl-3 10450 7.538 0.932 0.958 0.949 0.958 0.963 0.946 0.927 0.905 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
64. T10C6.4 srx-44 8454 7.537 0.941 0.959 0.934 0.959 0.971 0.946 0.870 0.957 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
65. C05C8.4 gei-6 6026 7.536 0.911 0.949 0.921 0.949 0.955 0.974 0.933 0.944 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_504836]
66. R01H2.6 ubc-18 13394 7.535 0.926 0.964 0.938 0.964 0.968 0.928 0.909 0.938 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_498541]
67. T10F2.3 ulp-1 8351 7.533 0.938 0.960 0.955 0.960 0.958 0.935 0.889 0.938 Sentrin-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q09353]
68. F12F6.3 rib-1 10524 7.532 0.930 0.965 0.947 0.965 0.959 0.925 0.908 0.933 Multiple exostoses homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01704]
69. F31D4.3 fkb-6 21313 7.531 0.929 0.939 0.916 0.939 0.964 0.966 0.964 0.914 FK506-Binding protein family [Source:RefSeq peptide;Acc:NP_508026]
70. C50C3.6 prp-8 19582 7.531 0.952 0.942 0.927 0.942 0.970 0.965 0.883 0.950 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
71. Y55F3AM.9 Y55F3AM.9 2179 7.531 0.944 0.943 0.955 0.943 0.953 0.949 0.943 0.901
72. T21E12.4 dhc-1 20370 7.528 0.955 0.938 0.948 0.938 0.967 0.930 0.919 0.933 Dynein heavy chain, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19020]
73. F16D3.2 rsd-6 8211 7.525 0.932 0.952 0.948 0.952 0.954 0.942 0.925 0.920
74. Y81G3A.3 gcn-2 5831 7.524 0.929 0.951 0.958 0.951 0.963 0.963 0.898 0.911 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
75. Y38A8.2 pbs-3 18117 7.522 0.919 0.967 0.957 0.967 0.968 0.935 0.894 0.915 Proteasome subunit beta type-3 [Source:UniProtKB/Swiss-Prot;Acc:Q23237]
76. Y39G10AL.3 cdk-7 3495 7.52 0.961 0.979 0.952 0.979 0.904 0.929 0.879 0.937 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
77. Y116A8C.35 uaf-2 13808 7.52 0.917 0.971 0.961 0.971 0.972 0.909 0.899 0.920 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
78. DY3.2 lmn-1 22449 7.519 0.952 0.976 0.950 0.976 0.950 0.908 0.890 0.917 Lamin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21443]
79. Y47G6A.20 rnp-6 5542 7.519 0.941 0.959 0.929 0.959 0.949 0.951 0.910 0.921 RNP (RRM RNA binding domain) containing [Source:RefSeq peptide;Acc:NP_491177]
80. F39H11.5 pbs-7 13631 7.519 0.896 0.962 0.962 0.962 0.966 0.936 0.899 0.936 Proteasome Beta Subunit [Source:RefSeq peptide;Acc:NP_492354]
81. C47D12.1 trr-1 4646 7.518 0.946 0.952 0.952 0.952 0.958 0.873 0.933 0.952 Transcription-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EEV2]
82. W01B6.9 ndc-80 4670 7.518 0.955 0.948 0.956 0.948 0.945 0.947 0.879 0.940 Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
83. M7.2 klc-1 4706 7.517 0.960 0.961 0.933 0.961 0.930 0.920 0.927 0.925 Kinesin Light Chain [Source:RefSeq peptide;Acc:NP_001255535]
84. F23F1.8 rpt-4 14303 7.516 0.940 0.959 0.959 0.959 0.932 0.933 0.915 0.919 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
85. D1054.14 prp-38 6504 7.515 0.930 0.971 0.930 0.971 0.963 0.932 0.869 0.949 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_505762]
86. Y50E8A.4 unc-61 8599 7.514 0.918 0.959 0.952 0.959 0.956 0.949 0.927 0.894
87. Y111B2A.14 pqn-80 6445 7.513 0.924 0.930 0.960 0.930 0.949 0.950 0.922 0.948 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_001255178]
88. T12D8.3 acbp-5 6816 7.513 0.948 0.967 0.955 0.967 0.945 0.937 0.864 0.930 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
89. CD4.6 pas-6 18332 7.513 0.937 0.962 0.933 0.962 0.961 0.928 0.878 0.952 Proteasome subunit alpha type-1 [Source:UniProtKB/Swiss-Prot;Acc:O44156]
90. C25H3.7 C25H3.7 6334 7.513 0.945 0.934 0.964 0.934 0.964 0.954 0.899 0.919
91. T10F2.1 gars-1 7204 7.513 0.922 0.939 0.937 0.939 0.958 0.947 0.936 0.935 Glycine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q10039]
92. F28B3.7 him-1 18274 7.512 0.954 0.967 0.952 0.967 0.939 0.912 0.892 0.929 Structural maintenance of chromosomes protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O01789]
93. F44A2.1 tag-153 16535 7.511 0.940 0.955 0.936 0.955 0.937 0.921 0.931 0.936
94. ZK1098.8 mut-7 4940 7.51 0.947 0.937 0.949 0.937 0.956 0.929 0.913 0.942 Exonuclease mut-7 [Source:UniProtKB/Swiss-Prot;Acc:P34607]
95. R02D3.5 fnta-1 5258 7.51 0.942 0.948 0.962 0.948 0.959 0.939 0.872 0.940 FarNesylTransferase, Alpha subunit [Source:RefSeq peptide;Acc:NP_499882]
96. C36B1.3 rpb-3 4442 7.51 0.919 0.972 0.953 0.972 0.954 0.924 0.898 0.918 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
97. F01G4.3 skih-2 3353 7.51 0.937 0.950 0.978 0.950 0.960 0.938 0.859 0.938 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
98. W02B12.2 rsp-2 14764 7.51 0.890 0.956 0.944 0.956 0.949 0.937 0.935 0.943 Probable splicing factor, arginine/serine-rich 2 [Source:UniProtKB/Swiss-Prot;Acc:Q23120]
99. C12D8.10 akt-1 12100 7.509 0.960 0.958 0.959 0.958 0.920 0.920 0.926 0.908 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
100. C26E6.5 fsn-1 6615 7.509 0.953 0.957 0.934 0.957 0.904 0.957 0.919 0.928 F-box/SPRY domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18223]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA