C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R10E11.4

Gene ID Gene Name Reads Transcripts Annotation
R10E11.4 sqv-3 5431 R10E11.4 Probable galactosyltransferase sqv-3 [Source:UniProtKB/Swiss-Prot;Acc:P34548]

Genes with expression patterns similar to R10E11.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R10E11.4 sqv-3 5431 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable galactosyltransferase sqv-3 [Source:UniProtKB/Swiss-Prot;Acc:P34548]
2. C09H6.3 mau-2 3280 7.584 0.936 0.957 0.958 0.957 0.971 0.958 0.899 0.948 Maternal uncoordinated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O17581]
3. Y41D4B.13 ced-2 10100 7.581 0.966 0.981 0.975 0.981 0.951 0.874 0.915 0.938 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
4. T20D3.7 vps-26 9349 7.55 0.970 0.964 0.979 0.964 0.943 0.894 0.946 0.890 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
5. R05D11.7 snrp-27 4159 7.549 0.966 0.972 0.960 0.972 0.911 0.951 0.888 0.929 Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
6. T20B12.2 tbp-1 9014 7.545 0.956 0.973 0.980 0.973 0.891 0.899 0.915 0.958 TATA-box-binding protein [Source:UniProtKB/Swiss-Prot;Acc:P32085]
7. F28B12.3 vrk-1 7133 7.544 0.962 0.952 0.967 0.952 0.942 0.924 0.957 0.888 Serine/threonine-protein kinase VRK1 [Source:UniProtKB/Swiss-Prot;Acc:Q19848]
8. Y51H1A.4 ing-3 8617 7.54 0.950 0.970 0.983 0.970 0.963 0.882 0.921 0.901 Inhibitor of growth protein [Source:RefSeq peptide;Acc:NP_496909]
9. T22C1.3 T22C1.3 2305 7.53 0.979 0.968 0.971 0.968 0.964 0.886 0.852 0.942
10. C10C6.5 wht-2 3408 7.522 0.952 0.969 0.985 0.969 0.964 0.899 0.899 0.885 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_502164]
11. F55G1.8 plk-3 12036 7.514 0.940 0.952 0.961 0.952 0.950 0.864 0.929 0.966 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
12. Y57E12AL.5 mdt-6 3828 7.495 0.974 0.960 0.968 0.960 0.936 0.839 0.907 0.951 Mediator of RNA polymerase II transcription subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N337]
13. ZK1320.12 taf-8 3558 7.493 0.962 0.954 0.966 0.954 0.964 0.864 0.858 0.971 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
14. C38C10.2 slc-17.2 6819 7.49 0.965 0.976 0.971 0.976 0.904 0.857 0.919 0.922 Uncharacterized transporter slc-17.2 [Source:UniProtKB/Swiss-Prot;Acc:Q03567]
15. C25A1.4 C25A1.4 15507 7.489 0.970 0.948 0.973 0.948 0.942 0.880 0.892 0.936
16. W04D2.6 W04D2.6 7330 7.486 0.942 0.956 0.937 0.956 0.926 0.952 0.920 0.897
17. F21D5.6 F21D5.6 1798 7.478 0.961 0.980 0.970 0.980 0.937 0.833 0.938 0.879
18. Y41D4B.19 npp-8 12992 7.475 0.959 0.933 0.961 0.933 0.964 0.854 0.921 0.950 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
19. C38D4.6 pal-1 7627 7.471 0.932 0.977 0.960 0.977 0.933 0.916 0.869 0.907 Homeobox protein pal-1 [Source:UniProtKB/Swiss-Prot;Acc:P34766]
20. C48E7.3 lpd-2 10330 7.47 0.955 0.961 0.974 0.961 0.926 0.831 0.943 0.919 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
21. R06A4.4 imb-2 10302 7.461 0.973 0.973 0.981 0.973 0.953 0.817 0.896 0.895 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
22. F56F3.1 ifet-1 25772 7.457 0.950 0.936 0.934 0.936 0.952 0.879 0.925 0.945 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
23. K11D12.2 pqn-51 15951 7.455 0.973 0.969 0.969 0.969 0.933 0.835 0.897 0.910 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
24. C48D1.2 ced-3 4123 7.454 0.973 0.962 0.972 0.962 0.963 0.857 0.863 0.902 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
25. Y38C9A.2 cgp-1 11756 7.453 0.971 0.971 0.965 0.971 0.945 0.841 0.889 0.900 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
26. T12D8.3 acbp-5 6816 7.451 0.947 0.972 0.969 0.972 0.876 0.869 0.905 0.941 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
27. C37A2.2 pqn-20 10913 7.447 0.974 0.955 0.967 0.955 0.912 0.864 0.901 0.919 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491945]
28. B0205.9 B0205.9 3651 7.446 0.949 0.963 0.935 0.963 0.930 0.851 0.923 0.932
29. C02B10.2 snpn-1 5519 7.443 0.953 0.946 0.956 0.946 0.876 0.902 0.925 0.939 SNAPIN protein homolog [Source:UniProtKB/Swiss-Prot;Acc:O44445]
30. Y54E10A.4 fog-1 3560 7.44 0.937 0.965 0.952 0.965 0.944 0.861 0.880 0.936 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001021791]
31. C53A5.3 hda-1 18413 7.437 0.967 0.978 0.978 0.978 0.927 0.852 0.897 0.860 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
32. B0336.6 abi-1 3184 7.437 0.941 0.956 0.940 0.956 0.950 0.885 0.895 0.914 ABl Interactor homolog [Source:RefSeq peptide;Acc:NP_498224]
33. Y73B6A.5 lin-45 10864 7.436 0.973 0.973 0.985 0.973 0.955 0.833 0.900 0.844 Raf homolog serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q07292]
34. T19B4.2 npp-7 13073 7.434 0.960 0.967 0.958 0.967 0.909 0.845 0.919 0.909 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
35. W01A8.5 tofu-5 5678 7.434 0.966 0.980 0.955 0.980 0.934 0.836 0.885 0.898 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
36. T24D1.5 har-2 2882 7.433 0.947 0.960 0.961 0.960 0.951 0.856 0.875 0.923
37. F43G9.5 cfim-1 9169 7.432 0.972 0.969 0.982 0.969 0.951 0.804 0.868 0.917 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
38. R06F6.1 cdl-1 14167 7.43 0.930 0.977 0.968 0.977 0.932 0.808 0.887 0.951 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
39. Y53C10A.12 hsf-1 7899 7.425 0.954 0.963 0.971 0.963 0.948 0.789 0.917 0.920 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
40. F26H9.1 prom-1 6444 7.424 0.963 0.954 0.975 0.954 0.959 0.820 0.898 0.901 PRogression Of Meiosis [Source:RefSeq peptide;Acc:NP_492477]
41. R12C12.2 ran-5 14517 7.418 0.973 0.965 0.966 0.965 0.921 0.804 0.921 0.903 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
42. ZK353.1 cyy-1 5745 7.418 0.966 0.979 0.954 0.979 0.928 0.830 0.846 0.936 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
43. C16A11.3 C16A11.3 3250 7.416 0.934 0.945 0.963 0.945 0.946 0.878 0.880 0.925
44. F45E12.2 brf-1 4667 7.414 0.940 0.976 0.970 0.976 0.944 0.796 0.920 0.892 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
45. F35H8.3 zfp-2 2599 7.413 0.949 0.954 0.980 0.954 0.936 0.862 0.897 0.881 Zinc Finger Protein [Source:RefSeq peptide;Acc:NP_496055]
46. B0240.4 npp-22 5510 7.412 0.920 0.975 0.953 0.975 0.932 0.838 0.874 0.945 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
47. C36A4.5 maph-1.3 15493 7.411 0.949 0.940 0.979 0.940 0.946 0.847 0.905 0.905 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
48. F46F11.2 cey-2 47143 7.41 0.955 0.953 0.938 0.953 0.947 0.839 0.895 0.930 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
49. C26E6.7 eri-9 8069 7.408 0.967 0.961 0.947 0.961 0.935 0.834 0.888 0.915 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
50. C36A4.8 brc-1 1664 7.407 0.954 0.958 0.916 0.958 0.931 0.861 0.897 0.932 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_001254881]
51. T26A5.7 set-1 6948 7.406 0.931 0.973 0.973 0.973 0.918 0.803 0.909 0.926 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
52. F39H2.4 syp-3 2647 7.406 0.956 0.915 0.955 0.915 0.985 0.935 0.841 0.904
53. Y42G9A.6 wht-7 2348 7.406 0.959 0.961 0.964 0.961 0.943 0.829 0.866 0.923 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_001040881]
54. R07E5.14 rnp-4 11659 7.403 0.970 0.964 0.948 0.964 0.944 0.807 0.902 0.904 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
55. Y43F4B.4 npp-18 4780 7.4 0.975 0.960 0.958 0.960 0.924 0.798 0.910 0.915 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
56. C33H5.15 sgo-1 3674 7.4 0.960 0.975 0.956 0.975 0.884 0.826 0.907 0.917 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
57. K08E7.1 eak-7 18960 7.4 0.968 0.961 0.961 0.961 0.916 0.819 0.899 0.915 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
58. F25B3.1 ehbp-1 6409 7.398 0.959 0.966 0.972 0.966 0.929 0.884 0.861 0.861 EH (Eps-15-homology) domain Binding Protein family [Source:RefSeq peptide;Acc:NP_505468]
59. F53F4.3 tbcb-1 6442 7.396 0.960 0.950 0.946 0.950 0.946 0.794 0.913 0.937 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
60. T14G10.6 tsp-12 10308 7.395 0.952 0.978 0.963 0.978 0.944 0.835 0.884 0.861 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
61. F28D1.10 gex-3 5286 7.394 0.908 0.968 0.975 0.968 0.961 0.869 0.891 0.854 Membrane-associated protein gex-3 [Source:UniProtKB/Swiss-Prot;Acc:P55163]
62. Y37D8A.9 mrg-1 14369 7.393 0.960 0.968 0.973 0.968 0.932 0.771 0.908 0.913 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
63. F54D5.11 F54D5.11 2756 7.392 0.964 0.940 0.968 0.940 0.931 0.817 0.883 0.949 Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
64. CC4.3 smu-1 4169 7.392 0.951 0.948 0.972 0.948 0.943 0.816 0.897 0.917 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
65. C23G10.8 C23G10.8 4642 7.391 0.884 0.963 0.931 0.963 0.968 0.850 0.886 0.946
66. Y43E12A.1 cyb-2.1 12500 7.39 0.910 0.960 0.941 0.960 0.945 0.883 0.872 0.919 CYclin B [Source:RefSeq peptide;Acc:NP_502047]
67. M03C11.4 hat-1 3839 7.389 0.919 0.932 0.927 0.932 0.966 0.830 0.919 0.964 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
68. F36H1.4 lin-3 6043 7.388 0.962 0.969 0.973 0.969 0.874 0.878 0.862 0.901
69. Y39G10AL.3 cdk-7 3495 7.388 0.953 0.944 0.949 0.944 0.879 0.900 0.893 0.926 Cyclin-dependent kinase 7 [Source:UniProtKB/Swiss-Prot;Acc:G5EFV5]
70. F43G6.9 patr-1 23000 7.386 0.950 0.981 0.966 0.981 0.923 0.804 0.915 0.866 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
71. C18E9.3 szy-20 6819 7.385 0.961 0.931 0.962 0.931 0.949 0.841 0.908 0.902 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
72. C46A5.9 hcf-1 6295 7.383 0.948 0.959 0.944 0.959 0.926 0.843 0.888 0.916 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]
73. F59E10.1 orc-2 4698 7.383 0.936 0.965 0.951 0.965 0.959 0.787 0.885 0.935 Origin recognition complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21037]
74. Y47D3A.26 smc-3 6256 7.383 0.894 0.925 0.956 0.925 0.952 0.882 0.899 0.950 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
75. C29E4.3 ran-2 3933 7.383 0.964 0.946 0.951 0.946 0.935 0.955 0.809 0.877 Ran GTPase-activating protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34342]
76. F52C9.7 mog-3 9880 7.382 0.953 0.970 0.955 0.970 0.951 0.800 0.866 0.917 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
77. K07C5.8 cash-1 10523 7.381 0.982 0.969 0.955 0.969 0.855 0.862 0.865 0.924 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
78. K07C5.1 arx-2 20142 7.379 0.980 0.974 0.971 0.974 0.953 0.802 0.888 0.837 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
79. JC8.6 lin-54 5789 7.377 0.941 0.944 0.948 0.944 0.963 0.782 0.908 0.947
80. Y54E5A.4 npp-4 6288 7.376 0.970 0.959 0.974 0.959 0.906 0.804 0.898 0.906 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
81. R03D7.7 nos-1 8407 7.376 0.970 0.970 0.977 0.970 0.925 0.804 0.862 0.898 NanOS related [Source:RefSeq peptide;Acc:NP_496358]
82. T05H10.2 apn-1 5628 7.375 0.946 0.961 0.971 0.961 0.899 0.872 0.831 0.934 DNA-(apurinic or apyrimidinic site) lyase [Source:UniProtKB/Swiss-Prot;Acc:Q10002]
83. T21E3.1 egg-4 7194 7.374 0.940 0.962 0.945 0.962 0.939 0.831 0.875 0.920 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_491269]
84. W02D9.3 hmg-20 2693 7.369 0.945 0.939 0.966 0.939 0.933 0.868 0.891 0.888 HMG [Source:RefSeq peptide;Acc:NP_493178]
85. F32H2.4 thoc-3 3861 7.369 0.951 0.968 0.965 0.968 0.904 0.843 0.840 0.930 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
86. F18A1.3 lir-1 2995 7.369 0.935 0.960 0.939 0.960 0.917 0.859 0.888 0.911 LIn-26 Related [Source:RefSeq peptide;Acc:NP_001022093]
87. F25B3.6 rtfo-1 11965 7.367 0.919 0.980 0.958 0.980 0.932 0.837 0.904 0.857 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
88. ZK1010.3 frg-1 3533 7.366 0.948 0.970 0.968 0.970 0.921 0.838 0.906 0.845 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
89. T19C3.8 fem-2 9225 7.366 0.970 0.976 0.978 0.976 0.931 0.840 0.870 0.825 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
90. C05C8.6 hpo-9 8263 7.365 0.956 0.959 0.962 0.959 0.931 0.836 0.865 0.897
91. T07F8.3 gld-3 9324 7.365 0.952 0.968 0.971 0.968 0.882 0.818 0.857 0.949 Defective in germ line development protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZK7]
92. Y55F3AM.12 dcap-1 8679 7.365 0.951 0.972 0.978 0.972 0.932 0.785 0.885 0.890 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
93. C08B11.5 sap-49 10553 7.365 0.955 0.961 0.921 0.961 0.893 0.822 0.888 0.964 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
94. R07H5.1 prx-14 5489 7.363 0.944 0.974 0.978 0.974 0.937 0.815 0.839 0.902 PeRoXisome assembly factor [Source:RefSeq peptide;Acc:NP_502097]
95. C25D7.8 otub-1 7941 7.362 0.952 0.956 0.937 0.956 0.919 0.850 0.894 0.898 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
96. C35D10.9 ced-4 3446 7.361 0.947 0.959 0.950 0.959 0.943 0.787 0.883 0.933 Cell death protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P30429]
97. F41H10.11 sand-1 5039 7.361 0.947 0.975 0.967 0.975 0.883 0.817 0.898 0.899 SAND endocytosis protein family [Source:RefSeq peptide;Acc:NP_500791]
98. T24D1.3 T24D1.3 5300 7.359 0.935 0.898 0.971 0.898 0.944 0.855 0.912 0.946
99. Y46G5A.5 pisy-1 13040 7.359 0.975 0.952 0.979 0.952 0.942 0.802 0.875 0.882 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
100. B0035.3 B0035.3 4118 7.358 0.964 0.954 0.963 0.954 0.901 0.835 0.868 0.919

There are 2282 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA