C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for F25H9.6

Gene ID Gene Name Reads Transcripts Annotation
F25H9.6 F25H9.6 2437 F25H9.6

Genes with expression patterns similar to F25H9.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F25H9.6 F25H9.6 2437 2 - 1.000 - 1.000 - - - -
2. F32D1.9 fipp-1 10239 1.942 - 0.971 - 0.971 - - - - Factor Interacting with Poly(A) Polymerase [Source:RefSeq peptide;Acc:NP_504203]
3. F19F10.10 ets-6 1342 1.934 - 0.967 - 0.967 - - - - ETS class transcription factor [Source:RefSeq peptide;Acc:NP_504954]
4. C16A3.4 C16A3.4 10030 1.932 - 0.966 - 0.966 - - - -
5. F41G3.14 exos-8 2300 1.93 - 0.965 - 0.965 - - - - EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_495376]
6. C36B1.5 prp-4 2714 1.93 - 0.965 - 0.965 - - - - yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492363]
7. F19B6.2 ufd-1 15357 1.928 - 0.964 - 0.964 - - - - Ubiquitin fusion degradation protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19584]
8. B0261.1 B0261.1 5979 1.928 - 0.964 - 0.964 - - - -
9. R07G3.5 pgam-5 11646 1.926 - 0.963 - 0.963 - - - - Serine/threonine-protein phosphatase Pgam5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09422]
10. T10B11.3 ztf-4 5161 1.926 - 0.963 - 0.963 - - - - Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_491976]
11. C03D6.3 cel-1 2793 1.924 - 0.962 - 0.962 - - - - mRNA-capping enzyme Polynucleotide 5'-triphosphatase mRNA guanylyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q17607]
12. F12F6.7 F12F6.7 5217 1.924 - 0.962 - 0.962 - - - - Probable DNA polymerase delta small subunit [Source:UniProtKB/Swiss-Prot;Acc:Q19366]
13. W02B12.3 rsp-1 9235 1.924 - 0.962 - 0.962 - - - - Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
14. R12E2.1 R12E2.1 4421 1.924 - 0.962 - 0.962 - - - -
15. F57B10.6 xpg-1 2000 1.922 - 0.961 - 0.961 - - - - XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_491891]
16. Y54E5A.4 npp-4 6288 1.922 - 0.961 - 0.961 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
17. Y54E10A.9 vbh-1 28746 1.922 - 0.961 - 0.961 - - - - Vasa-and Belle-like Helicase [Source:RefSeq peptide;Acc:NP_491113]
18. ZK328.1 cyk-3 2554 1.922 - 0.961 - 0.961 - - - - CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_498311]
19. F25B4.5 F25B4.5 6550 1.92 - 0.960 - 0.960 - - - -
20. T01B7.5 T01B7.5 4540 1.92 - 0.960 - 0.960 - - - -
21. B0564.11 rde-11 3664 1.92 - 0.960 - 0.960 - - - - RNA interference defective protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q6BET5]
22. Y49F6B.4 smu-2 4164 1.92 - 0.960 - 0.960 - - - - Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_494559]
23. F56C9.6 F56C9.6 4303 1.92 - 0.960 - 0.960 - - - -
24. T04A8.14 emb-5 11746 1.92 - 0.960 - 0.960 - - - - Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
25. W01B6.9 ndc-80 4670 1.92 - 0.960 - 0.960 - - - - Kinetochore protein ndc-80 [Source:UniProtKB/Swiss-Prot;Acc:Q17635]
26. R148.4 R148.4 2351 1.92 - 0.960 - 0.960 - - - -
27. K06H7.3 vms-1 4583 1.92 - 0.960 - 0.960 - - - -
28. Y102E9.2 Y102E9.2 15286 1.92 - 0.960 - 0.960 - - - - tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q23232]
29. C34E10.10 C34E10.10 4236 1.918 - 0.959 - 0.959 - - - -
30. Y47H9C.8 Y47H9C.8 2467 1.918 - 0.959 - 0.959 - - - -
31. R07G3.3 npp-21 3792 1.918 - 0.959 - 0.959 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_741024]
32. C26C6.5 dcp-66 9828 1.918 - 0.959 - 0.959 - - - - Deacetylase Complex Protein [Source:RefSeq peptide;Acc:NP_492111]
33. ZK546.14 ZK546.14 9848 1.916 - 0.958 - 0.958 - - - -
34. F29B9.5 F29B9.5 31560 1.916 - 0.958 - 0.958 - - - -
35. M7.1 let-70 85699 1.916 - 0.958 - 0.958 - - - - Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
36. M142.8 M142.8 1816 1.916 - 0.958 - 0.958 - - - - Protein-lysine N-methyltransferase M142.8 [Source:UniProtKB/Swiss-Prot;Acc:Q5WRN3]
37. T26A5.9 dlc-1 59038 1.916 - 0.958 - 0.958 - - - - Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
38. H04D03.2 H04D03.2 3123 1.916 - 0.958 - 0.958 - - - -
39. Y37D8A.10 hpo-21 14222 1.916 - 0.958 - 0.958 - - - - Probable signal peptidase complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWW1]
40. ZK858.7 ZK858.7 2817 1.916 - 0.958 - 0.958 - - - -
41. R12C12.2 ran-5 14517 1.914 - 0.957 - 0.957 - - - - associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
42. D2089.1 rsp-7 11057 1.914 - 0.957 - 0.957 - - - - Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
43. Y43F8C.6 Y43F8C.6 4090 1.914 - 0.957 - 0.957 - - - -
44. R11A8.2 R11A8.2 3420 1.914 - 0.957 - 0.957 - - - - Protein mos-2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21924]
45. ZK742.1 xpo-1 20741 1.914 - 0.957 - 0.957 - - - - eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
46. C05C8.2 C05C8.2 4314 1.914 - 0.957 - 0.957 - - - - KRR1 small subunit processome component [Source:RefSeq peptide;Acc:NP_504837]
47. T10G3.6 gut-2 3374 1.914 - 0.957 - 0.957 - - - -
48. ZK792.6 let-60 16967 1.914 - 0.957 - 0.957 - - - - Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
49. K11D12.2 pqn-51 15951 1.912 - 0.956 - 0.956 - - - - Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
50. T06G6.9 pfd-3 10945 1.912 - 0.956 - 0.956 - - - - Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:O18054]
51. T22C1.1 T22C1.1 7329 1.912 - 0.956 - 0.956 - - - -
52. T07F8.4 T07F8.4 6137 1.912 - 0.956 - 0.956 - - - -
53. ZK1128.6 ttll-4 6059 1.91 - 0.955 - 0.955 - - - - Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
54. ZK973.1 ZK973.1 4334 1.91 - 0.955 - 0.955 - - - -
55. Y47G6A.2 inx-22 3576 1.91 - 0.955 - 0.955 - - - - Innexin [Source:RefSeq peptide;Acc:NP_491186]
56. C07H6.4 C07H6.4 6595 1.91 - 0.955 - 0.955 - - - -
57. E04D5.1 E04D5.1 17275 1.91 - 0.955 - 0.955 - - - - Eukaryotic translation initiation factor 2A [Source:UniProtKB/Swiss-Prot;Acc:Q19052]
58. C03B8.4 lin-13 7489 1.91 - 0.955 - 0.955 - - - - Zinc finger protein lin-13 [Source:UniProtKB/Swiss-Prot;Acc:Q11107]
59. Y47G6A.9 Y47G6A.9 4606 1.91 - 0.955 - 0.955 - - - -
60. H27M09.2 rpb-5 4744 1.91 - 0.955 - 0.955 - - - - DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
61. F09G2.9 attf-2 14771 1.91 - 0.955 - 0.955 - - - - AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
62. C47B2.3 tba-2 31086 1.91 - 0.955 - 0.955 - - - - Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:P34690]
63. F25B5.6 F25B5.6 10665 1.91 - 0.955 - 0.955 - - - - Putative folylpolyglutamate synthase [Source:UniProtKB/Swiss-Prot;Acc:Q09509]
64. K07A1.12 lin-53 15817 1.91 - 0.955 - 0.955 - - - - Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
65. Y48E1C.1 Y48E1C.1 3141 1.908 - 0.954 - 0.954 - - - -
66. F15D4.1 btf-1 2519 1.908 - 0.954 - 0.954 - - - - BTAF (TBP-associated factor) homolog [Source:RefSeq peptide;Acc:NP_496802]
67. F35G12.10 asb-1 9077 1.908 - 0.954 - 0.954 - - - - ATP Synthase B homolog [Source:RefSeq peptide;Acc:NP_497938]
68. C43E11.1 acin-1 7781 1.908 - 0.954 - 0.954 - - - - ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
69. F52B11.1 cfp-1 8570 1.908 - 0.954 - 0.954 - - - - CFP1 (CpG-binding protein, CXXC Finger Protein 1) homolog [Source:RefSeq peptide;Acc:NP_001023214]
70. B0001.5 B0001.5 2145 1.908 - 0.954 - 0.954 - - - -
71. C26E6.4 rpb-2 7053 1.908 - 0.954 - 0.954 - - - - DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
72. T10B5.3 T10B5.3 15788 1.908 - 0.954 - 0.954 - - - -
73. F25D7.1 cup-2 14977 1.908 - 0.954 - 0.954 - - - - Derlin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93561]
74. R06A4.9 pfs-2 4733 1.906 - 0.953 - 0.953 - - - - Polyadenylation Factor Subunit homolog [Source:RefSeq peptide;Acc:NP_001293597]
75. B0025.2 csn-2 5205 1.906 - 0.953 - 0.953 - - - - COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
76. Y47D3A.14 Y47D3A.14 1513 1.906 - 0.953 - 0.953 - - - -
77. C32E8.5 C32E8.5 5536 1.906 - 0.953 - 0.953 - - - -
78. T23H2.1 npp-12 12425 1.906 - 0.953 - 0.953 - - - - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
79. Y54G11A.11 Y54G11A.11 14933 1.906 - 0.953 - 0.953 - - - - Transcription elongation factor 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVZ8]
80. ZK20.3 rad-23 35070 1.906 - 0.953 - 0.953 - - - -
81. F32A5.7 lsm-4 3785 1.906 - 0.953 - 0.953 - - - - Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
82. F45E12.3 cul-4 3393 1.906 - 0.953 - 0.953 - - - - Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q17392]
83. M04F3.1 rpa-2 4944 1.906 - 0.953 - 0.953 - - - - Replication Protein A homolog [Source:RefSeq peptide;Acc:NP_491446]
84. W03G1.6 pig-1 5015 1.906 - 0.953 - 0.953 - - - - Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
85. F54C8.4 F54C8.4 5943 1.906 - 0.953 - 0.953 - - - - Probable tyrosine-protein phosphatase F54C8.4 [Source:UniProtKB/Swiss-Prot;Acc:P34442]
86. C04G6.3 pld-1 6341 1.906 - 0.953 - 0.953 - - - - PhosphoLipase D [Source:RefSeq peptide;Acc:NP_494939]
87. C17H12.13 anat-1 12995 1.906 - 0.953 - 0.953 - - - - AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
88. C08B11.5 sap-49 10553 1.906 - 0.953 - 0.953 - - - - Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
89. T24B1.1 T24B1.1 6744 1.904 - 0.952 - 0.952 - - - - Golgin-84 [Source:UniProtKB/Swiss-Prot;Acc:P90970]
90. C48B4.10 C48B4.10 8867 1.904 - 0.952 - 0.952 - - - -
91. Y48G8AL.1 herc-1 3873 1.904 - 0.952 - 0.952 - - - - HECT and RCC domain E3 ubiquitin ligase [Source:RefSeq peptide;Acc:NP_001293432]
92. W08F4.8 cdc-37 23424 1.904 - 0.952 - 0.952 - - - - Probable Hsp90 co-chaperone cdc37 [Source:UniProtKB/Swiss-Prot;Acc:O02108]
93. ZK632.6 cnx-1 7807 1.904 - 0.952 - 0.952 - - - - Calnexin [Source:UniProtKB/Swiss-Prot;Acc:P34652]
94. H35B03.2 H35B03.2 3335 1.904 - 0.952 - 0.952 - - - -
95. Y71G12B.15 ubc-3 9409 1.904 - 0.952 - 0.952 - - - - UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001293441]
96. H12C20.2 pms-2 1722 1.904 - 0.952 - 0.952 - - - - PMS (Post Meiotic Segregation) family [Source:RefSeq peptide;Acc:NP_505934]
97. ZK381.4 pgl-1 20651 1.904 - 0.952 - 0.952 - - - - P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
98. F28H1.3 aars-2 13537 1.904 - 0.952 - 0.952 - - - - Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
99. K02B12.8 zhp-3 1310 1.904 - 0.952 - 0.952 - - - - Zip (yeast meiotic zipper) Homologous Protein [Source:RefSeq peptide;Acc:NP_001250801]
100. F26E4.8 tba-1 26935 1.904 - 0.952 - 0.952 - - - - TuBulin, Alpha [Source:RefSeq peptide;Acc:NP_001251213]

There are 38 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA