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Results for B0564.11

Gene ID Gene Name Reads Transcripts Annotation
B0564.11 rde-11 3664 B0564.11.1, B0564.11.2 RNA interference defective protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q6BET5]

Genes with expression patterns similar to B0564.11

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0564.11 rde-11 3664 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA interference defective protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q6BET5]
2. F59A3.4 F59A3.4 11625 7.562 0.936 0.961 0.963 0.961 0.977 0.970 0.903 0.891
3. C47D12.8 xpf-1 6173 7.53 0.884 0.973 0.934 0.973 0.970 0.950 0.967 0.879 (Xeroderma Pigmentosum group F) DNA repair gene homolog [Source:RefSeq peptide;Acc:NP_496498]
4. T07E3.5 brc-2 3212 7.525 0.941 0.959 0.964 0.959 0.953 0.945 0.931 0.873 BRCa homolog (tumor suppressor gene Brca1) [Source:RefSeq peptide;Acc:NP_498502]
5. T05A6.2 cki-2 13153 7.521 0.943 0.957 0.957 0.957 0.969 0.967 0.932 0.839 CKI family (Cyclin-dependent Kinase Inhibitor) [Source:RefSeq peptide;Acc:NP_001022309]
6. C03B8.4 lin-13 7489 7.511 0.931 0.973 0.964 0.973 0.917 0.924 0.924 0.905 Zinc finger protein lin-13 [Source:UniProtKB/Swiss-Prot;Acc:Q11107]
7. W03G9.3 enu-3.3 3586 7.506 0.924 0.922 0.921 0.922 0.954 0.981 0.951 0.931 ENhancer of Uncoordination [Source:RefSeq peptide;Acc:NP_491487]
8. F20G4.3 nmy-2 27210 7.504 0.924 0.966 0.961 0.966 0.978 0.945 0.880 0.884 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
9. C50C3.8 bath-42 18053 7.494 0.924 0.969 0.962 0.969 0.956 0.945 0.921 0.848 BTB and MATH domain-containing protein 42 [Source:UniProtKB/Swiss-Prot;Acc:P34371]
10. F56H1.4 rpt-5 16849 7.491 0.928 0.959 0.955 0.959 0.958 0.966 0.913 0.853 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_491672]
11. R12E2.3 rpn-8 11194 7.489 0.905 0.960 0.959 0.960 0.968 0.967 0.901 0.869 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_491319]
12. M03D4.1 zen-4 8185 7.488 0.941 0.947 0.932 0.947 0.958 0.961 0.916 0.886 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
13. F30A10.10 usp-48 11536 7.487 0.919 0.956 0.963 0.956 0.968 0.970 0.908 0.847 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_492524]
14. T12E12.1 T12E12.1 7629 7.479 0.940 0.972 0.955 0.972 0.963 0.941 0.927 0.809 Probable protein ariadne-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22431]
15. C52E4.4 rpt-1 16724 7.474 0.932 0.941 0.974 0.941 0.979 0.953 0.889 0.865 26S protease regulatory subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q18787]
16. K08E3.3 toca-2 2060 7.466 0.874 0.940 0.945 0.940 0.943 0.981 0.927 0.916 TOCA (Transducer Of Cdc42-dependent Actin assembly) homolog [Source:RefSeq peptide;Acc:NP_499839]
17. Y49E10.1 rpt-6 7806 7.465 0.914 0.971 0.942 0.971 0.973 0.936 0.913 0.845 proteasome Regulatory Particle, ATPase-like [Source:RefSeq peptide;Acc:NP_499609]
18. F11A10.4 mon-2 6726 7.459 0.914 0.965 0.951 0.965 0.941 0.948 0.914 0.861 Monensin-resistant homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19338]
19. R04F11.5 R04F11.5 4201 7.458 0.945 0.920 0.962 0.920 0.979 0.942 0.875 0.915
20. E01A2.6 akir-1 25022 7.455 0.924 0.979 0.954 0.979 0.955 0.986 0.812 0.866 AKIRin (conserved nuclear protein family) homolog [Source:RefSeq peptide;Acc:NP_491304]
21. C04A2.7 dnj-5 9618 7.455 0.902 0.939 0.935 0.939 0.975 0.964 0.939 0.862 DnaJ homolog dnj-5 [Source:UniProtKB/Swiss-Prot;Acc:Q09446]
22. Y53C12A.1 wee-1.3 16766 7.449 0.935 0.986 0.947 0.986 0.961 0.972 0.800 0.862 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase wee-1.3 [Source:UniProtKB/Swiss-Prot;Acc:O18209]
23. F23F12.6 rpt-3 6433 7.449 0.892 0.967 0.943 0.967 0.961 0.971 0.855 0.893 Probable 26S protease regulatory subunit 6B [Source:UniProtKB/Swiss-Prot;Acc:P46502]
24. Y45F10D.9 sas-6 9563 7.448 0.887 0.965 0.948 0.965 0.970 0.964 0.892 0.857 Spindle assembly abnormal protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O62479]
25. F10G7.8 rpn-5 16014 7.444 0.918 0.962 0.966 0.962 0.959 0.970 0.906 0.801 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_494835]
26. F44A2.1 tag-153 16535 7.443 0.947 0.949 0.984 0.949 0.944 0.885 0.924 0.861
27. W09D10.2 tat-3 11820 7.441 0.950 0.959 0.952 0.959 0.930 0.944 0.815 0.932 Phospholipid-transporting ATPase [Source:RefSeq peptide;Acc:NP_499363]
28. T27A3.2 usp-5 11388 7.441 0.955 0.971 0.959 0.971 0.957 0.943 0.916 0.769 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_491765]
29. F55B12.3 sel-10 10304 7.439 0.906 0.960 0.916 0.960 0.960 0.943 0.944 0.850 F-box/WD repeat-containing protein sel-10 [Source:UniProtKB/Swiss-Prot;Acc:Q93794]
30. F49C12.8 rpn-7 15688 7.438 0.921 0.949 0.957 0.949 0.973 0.970 0.873 0.846 26S proteasome non-ATPase regulatory subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20585]
31. B0348.6 ife-3 26859 7.438 0.901 0.964 0.933 0.964 0.955 0.948 0.930 0.843 Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:O61955]
32. C34C12.3 pph-6 12139 7.436 0.919 0.925 0.941 0.925 0.962 0.979 0.887 0.898 Putative serine/threonine-protein phosphatase pph-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09496]
33. ZK520.4 cul-2 6732 7.435 0.956 0.980 0.919 0.980 0.967 0.943 0.885 0.805 Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q17390]
34. ZK632.7 panl-3 5387 7.434 0.924 0.949 0.925 0.949 0.971 0.958 0.831 0.927 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 [Source:UniProtKB/Swiss-Prot;Acc:P34653]
35. F23F1.8 rpt-4 14303 7.433 0.903 0.954 0.962 0.954 0.958 0.935 0.900 0.867 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
36. F11A10.1 lex-1 13720 7.431 0.903 0.966 0.933 0.966 0.953 0.919 0.888 0.903 Tat-binding homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:P54816]
37. F59E12.5 npl-4.2 5567 7.429 0.913 0.971 0.935 0.971 0.965 0.971 0.855 0.848 NPL (yeast Nuclear Protein Localization) homolog [Source:RefSeq peptide;Acc:NP_495094]
38. Y71F9B.7 plk-2 6594 7.427 0.938 0.940 0.940 0.940 0.955 0.971 0.883 0.860 Serine/threonine-protein kinase plk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N2L7]
39. C03E10.4 gly-20 10739 7.425 0.931 0.957 0.947 0.957 0.965 0.961 0.913 0.794 GLYcosylation related [Source:RefSeq peptide;Acc:NP_505864]
40. F25B4.7 F25B4.7 2461 7.425 0.933 0.940 0.955 0.940 0.949 0.913 0.904 0.891
41. F23C8.4 ubxn-1 25368 7.424 0.907 0.958 0.881 0.958 0.969 0.976 0.867 0.908 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
42. C54G10.2 rfc-1 8814 7.423 0.920 0.944 0.948 0.944 0.957 0.909 0.908 0.893 RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_001256606]
43. T16H12.5 bath-43 10021 7.423 0.907 0.947 0.949 0.947 0.977 0.961 0.903 0.832 BTB and MATH domain-containing protein 43 [Source:UniProtKB/Swiss-Prot;Acc:P34568]
44. Y110A7A.17 mat-1 3797 7.423 0.925 0.971 0.950 0.971 0.922 0.953 0.917 0.814 Metaphase-to-Anaphase Transition defect [Source:RefSeq peptide;Acc:NP_001021714]
45. K09H11.3 rga-3 6319 7.421 0.914 0.950 0.933 0.950 0.960 0.979 0.838 0.897 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_504503]
46. F54D5.14 smc-6 10569 7.42 0.890 0.976 0.958 0.976 0.949 0.975 0.812 0.884 SMC (structural maintenance of chromosomes) family [Source:RefSeq peptide;Acc:NP_496476]
47. F37A4.8 isw-1 9337 7.419 0.920 0.970 0.949 0.970 0.932 0.928 0.894 0.856 Chromatin-remodeling complex ATPase chain isw-1 [Source:UniProtKB/Swiss-Prot;Acc:P41877]
48. K07C11.2 air-1 13838 7.418 0.902 0.955 0.942 0.955 0.960 0.985 0.830 0.889 Aurora/Ipl1 Related kinase [Source:RefSeq peptide;Acc:NP_505119]
49. D1037.4 rab-8 14097 7.418 0.913 0.961 0.959 0.961 0.975 0.933 0.872 0.844 RAB family [Source:RefSeq peptide;Acc:NP_491199]
50. T03F1.9 hcp-4 4908 7.417 0.906 0.940 0.947 0.940 0.976 0.975 0.848 0.885 HoloCentric chromosome binding Protein [Source:RefSeq peptide;Acc:NP_491244]
51. F29D11.2 capg-1 9440 7.416 0.940 0.976 0.920 0.976 0.960 0.977 0.792 0.875 CAP-G condensin subunit [Source:RefSeq peptide;Acc:NP_492128]
52. ZK1248.10 tbc-2 5875 7.415 0.877 0.960 0.919 0.960 0.962 0.951 0.935 0.851 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_495156]
53. Y110A2AR.3 Y110A2AR.3 7003 7.414 0.888 0.944 0.913 0.944 0.963 0.976 0.871 0.915
54. C23G10.4 rpn-2 17587 7.414 0.917 0.931 0.945 0.931 0.971 0.988 0.810 0.921 26S proteasome non-ATPase regulatory subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18115]
55. C41C4.8 cdc-48.2 7843 7.414 0.923 0.951 0.951 0.951 0.936 0.963 0.868 0.871 Transitional endoplasmic reticulum ATPase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P54812]
56. Y97E10AL.3 Y97E10AL.3 3022 7.413 0.943 0.918 0.931 0.918 0.961 0.969 0.860 0.913
57. F32B6.8 tbc-3 9252 7.412 0.923 0.955 0.950 0.955 0.934 0.937 0.867 0.891 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
58. F52E1.13 lmd-3 25047 7.412 0.925 0.955 0.956 0.955 0.960 0.957 0.847 0.857 LysM Domain (peptidoglycan binding) protein [Source:RefSeq peptide;Acc:NP_872149]
59. C30C11.2 rpn-3 14437 7.411 0.937 0.964 0.965 0.964 0.948 0.937 0.876 0.820 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
60. T22D1.9 rpn-1 25674 7.411 0.929 0.964 0.937 0.964 0.952 0.962 0.820 0.883 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_501064]
61. M04F3.1 rpa-2 4944 7.41 0.935 0.971 0.945 0.971 0.934 0.965 0.840 0.849 Replication Protein A homolog [Source:RefSeq peptide;Acc:NP_491446]
62. ZK20.5 rpn-12 9173 7.408 0.909 0.950 0.891 0.950 0.969 0.952 0.880 0.907 26S proteasome non-ATPase regulatory subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q23449]
63. C02F5.9 pbs-6 20120 7.404 0.895 0.955 0.954 0.955 0.959 0.932 0.891 0.863 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
64. Y71F9AL.18 parp-1 3736 7.403 0.900 0.957 0.849 0.957 0.982 0.955 0.911 0.892 Poly(ADP-ribose) polymerase pme-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4H4]
65. K08F9.2 aipl-1 4352 7.403 0.904 0.951 0.952 0.951 0.951 0.971 0.846 0.877 AIP1 (Actin Interacting Protein 1) Like [Source:RefSeq peptide;Acc:NP_506733]
66. F30A10.6 sac-1 4596 7.399 0.900 0.940 0.958 0.940 0.973 0.970 0.831 0.887 SAC1 PIP phosphatase (yeast Suppressor of ACtin) homolog [Source:RefSeq peptide;Acc:NP_492518]
67. C07D10.2 bath-44 6288 7.397 0.927 0.973 0.934 0.973 0.957 0.953 0.895 0.785 BTB and MATH domain containing [Source:RefSeq peptide;Acc:NP_495550]
68. C50A2.2 cec-2 4169 7.397 0.964 0.964 0.956 0.964 0.889 0.909 0.942 0.809 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500047]
69. H04D03.1 enu-3.1 3447 7.396 0.847 0.920 0.925 0.920 0.959 0.961 0.909 0.955 ENhancer of Uncoordination [Source:RefSeq peptide;Acc:NP_499302]
70. F29G9.5 rpt-2 18618 7.396 0.913 0.946 0.972 0.946 0.956 0.957 0.858 0.848 Probable 26S protease regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368]
71. F22B5.7 zyg-9 6303 7.395 0.969 0.972 0.922 0.972 0.915 0.898 0.854 0.893 Zygote defective protein 9 [Source:UniProtKB/Swiss-Prot;Acc:G5EEM5]
72. Y43F4B.6 klp-19 13220 7.394 0.929 0.973 0.898 0.973 0.908 0.957 0.855 0.901 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_499742]
73. Y54G9A.6 bub-3 9123 7.393 0.890 0.954 0.942 0.954 0.951 0.964 0.897 0.841 yeast BUB homolog [Source:RefSeq peptide;Acc:NP_496879]
74. M7.2 klc-1 4706 7.39 0.911 0.960 0.932 0.960 0.945 0.919 0.884 0.879 Kinesin Light Chain [Source:RefSeq peptide;Acc:NP_001255535]
75. C12D8.10 akt-1 12100 7.39 0.939 0.970 0.944 0.970 0.962 0.921 0.875 0.809 Serine/threonine-protein kinase akt-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17941]
76. ZC404.3 spe-39 7397 7.39 0.926 0.967 0.924 0.967 0.915 0.936 0.896 0.859 Spermatogenesis-defective protein 39 [Source:UniProtKB/Swiss-Prot;Acc:Q23288]
77. T12A2.8 gen-1 10490 7.389 0.903 0.933 0.938 0.933 0.965 0.949 0.870 0.898 GEN1 Holliday junction resolvase homolog [Source:RefSeq peptide;Acc:NP_498361]
78. C05D11.7 atgl-1 4096 7.387 0.851 0.960 0.890 0.960 0.972 0.976 0.920 0.858 Adipose TriGlyceride Lipase [Source:RefSeq peptide;Acc:NP_741196]
79. F32D1.9 fipp-1 10239 7.385 0.921 0.974 0.939 0.974 0.943 0.931 0.934 0.769 Factor Interacting with Poly(A) Polymerase [Source:RefSeq peptide;Acc:NP_504203]
80. C06A1.1 cdc-48.1 52743 7.384 0.906 0.966 0.957 0.966 0.949 0.940 0.840 0.860 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
81. F59A6.6 rnh-1.0 8629 7.383 0.905 0.916 0.939 0.916 0.983 0.956 0.901 0.867 RNase H [Source:RefSeq peptide;Acc:NP_001040787]
82. K08E3.6 cyk-4 8158 7.382 0.957 0.960 0.954 0.960 0.904 0.953 0.847 0.847 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
83. T19A5.2 gck-1 7679 7.381 0.902 0.939 0.949 0.939 0.946 0.956 0.859 0.891 Germinal center kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:H2L099]
84. K07C5.8 cash-1 10523 7.379 0.939 0.971 0.936 0.971 0.939 0.925 0.929 0.769 CKA And Striatin Homolog [Source:RefSeq peptide;Acc:NP_505664]
85. B0205.3 rpn-10 16966 7.379 0.918 0.961 0.957 0.961 0.943 0.961 0.831 0.847 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_492809]
86. Y17G7B.2 ash-2 5452 7.378 0.926 0.955 0.932 0.955 0.923 0.890 0.862 0.935 ASH histone methyltransferase complex subunit (Drosophila absent, small or homeotic discs) [Source:RefSeq peptide;Acc:NP_496555]
87. ZK287.5 rbx-1 13546 7.375 0.925 0.949 0.940 0.949 0.954 0.937 0.911 0.810 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
88. W10D5.3 gei-17 8809 7.375 0.909 0.954 0.954 0.954 0.975 0.981 0.879 0.769 E3 SUMO-protein ligase gei-17 [Source:UniProtKB/Swiss-Prot;Acc:Q94361]
89. M18.7 aly-3 7342 7.373 0.914 0.930 0.959 0.930 0.949 0.983 0.846 0.862 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_001076697]
90. F41H10.6 hda-6 3325 7.369 0.911 0.954 0.971 0.954 0.947 0.905 0.905 0.822 Histone deacetylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20296]
91. H06H21.6 ubxn-6 9202 7.368 0.922 0.966 0.940 0.966 0.941 0.912 0.928 0.793 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_500648]
92. Y48B6A.14 hmg-1.1 88723 7.367 0.893 0.936 0.953 0.936 0.960 0.928 0.941 0.820 HMG [Source:RefSeq peptide;Acc:NP_496970]
93. Y40B10A.1 lbp-9 30119 7.366 0.894 0.938 0.958 0.938 0.962 0.937 0.921 0.818 Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
94. K02B2.3 mcu-1 20448 7.365 0.932 0.957 0.942 0.957 0.970 0.932 0.894 0.781 Mitochondrial Calcium Uniporter [Source:RefSeq peptide;Acc:NP_500892]
95. T10B5.6 knl-3 3516 7.358 0.930 0.974 0.964 0.974 0.908 0.936 0.888 0.784 Kinetochore NuLl [Source:RefSeq peptide;Acc:NP_503520]
96. T05G5.3 cdk-1 14112 7.357 0.914 0.966 0.940 0.966 0.915 0.936 0.912 0.808 Cyclin-dependent kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:P34556]
97. F43D2.1 ccnk-1 4008 7.357 0.856 0.930 0.943 0.930 0.962 0.972 0.885 0.879 CyCliN K [Source:RefSeq peptide;Acc:NP_506615]
98. Y94H6A.9 ubxn-2 7082 7.356 0.921 0.982 0.936 0.982 0.907 0.944 0.888 0.796 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001023590]
99. Y48A6B.11 rsa-2 1931 7.351 0.940 0.954 0.896 0.954 0.916 0.948 0.929 0.814 Regulator of Spindle Assembly [Source:RefSeq peptide;Acc:NP_001022886]
100. C14B9.4 plk-1 18785 7.351 0.934 0.972 0.948 0.972 0.908 0.924 0.900 0.793 Serine/threonine-protein kinase plk-1 [Source:UniProtKB/Swiss-Prot;Acc:P34331]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA