C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for ZK593.7

Gene ID Gene Name Reads Transcripts Annotation
ZK593.7 lsm-7 2443 ZK593.7.1, ZK593.7.2 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502034]

Genes with expression patterns similar to ZK593.7

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. ZK593.7 lsm-7 2443 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502034]
2. C06E7.1 sams-3 26921 7.603 0.936 0.940 0.958 0.940 0.976 0.958 0.947 0.948 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
3. Y17G7A.1 hmg-12 29989 7.598 0.932 0.930 0.963 0.930 0.951 0.973 0.975 0.944 HMG [Source:RefSeq peptide;Acc:NP_496544]
4. C48B4.11 C48B4.11 4384 7.58 0.931 0.918 0.947 0.918 0.975 0.962 0.970 0.959
5. K01G5.4 ran-1 32379 7.578 0.934 0.914 0.941 0.914 0.986 0.985 0.957 0.947 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
6. Y65B4BR.5 icd-2 58321 7.568 0.924 0.939 0.923 0.939 0.981 0.967 0.963 0.932 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
7. C26D10.2 hel-1 28697 7.564 0.942 0.911 0.937 0.911 0.964 0.963 0.976 0.960 Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
8. W01G7.3 rpb-11 7826 7.562 0.955 0.914 0.945 0.914 0.962 0.965 0.967 0.940 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
9. T02G5.9 kars-1 9763 7.555 0.919 0.920 0.890 0.920 0.980 0.976 0.974 0.976 Lysine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q22099]
10. W02B12.3 rsp-1 9235 7.554 0.946 0.904 0.944 0.904 0.981 0.982 0.961 0.932 Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
11. R13A5.12 lpd-7 10476 7.55 0.894 0.945 0.915 0.945 0.981 0.953 0.943 0.974 Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95Y89]
12. C53D5.6 imb-3 28921 7.549 0.941 0.914 0.925 0.914 0.969 0.948 0.976 0.962 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
13. C26E6.4 rpb-2 7053 7.548 0.903 0.926 0.924 0.926 0.973 0.984 0.958 0.954 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
14. F22D6.3 nars-1 18624 7.545 0.952 0.905 0.940 0.905 0.975 0.970 0.945 0.953 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
15. T28D9.10 snr-3 9995 7.545 0.958 0.931 0.923 0.931 0.967 0.960 0.894 0.981 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
16. T09A5.7 T09A5.7 5907 7.543 0.955 0.901 0.935 0.901 0.977 0.929 0.977 0.968
17. T10F2.4 prp-19 11298 7.542 0.937 0.901 0.940 0.901 0.974 0.951 0.972 0.966 Pre-mRNA-processing factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q10051]
18. DY3.1 tin-13 5225 7.539 0.944 0.908 0.917 0.908 0.979 0.967 0.960 0.956 Mitochondrial import inner membrane translocase subunit tim-13 [Source:UniProtKB/Swiss-Prot;Acc:O45319]
19. K08F11.3 cif-1 10218 7.538 0.948 0.894 0.933 0.894 0.983 0.958 0.975 0.953 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
20. B0511.8 mrps-30 5050 7.53 0.910 0.940 0.919 0.940 0.964 0.968 0.961 0.928 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_492783]
21. Y23H5B.6 Y23H5B.6 5886 7.53 0.928 0.925 0.952 0.925 0.945 0.968 0.928 0.959
22. F23F1.1 nfyc-1 9983 7.53 0.924 0.901 0.946 0.901 0.977 0.969 0.957 0.955 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
23. C56C10.8 icd-1 89788 7.528 0.904 0.936 0.913 0.936 0.973 0.958 0.954 0.954 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
24. C06A1.5 rpb-6 7515 7.525 0.933 0.918 0.940 0.918 0.966 0.952 0.960 0.938 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
25. T28D9.2 rsp-5 6460 7.525 0.942 0.921 0.910 0.921 0.959 0.951 0.963 0.958 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
26. F56D1.7 daz-1 23684 7.524 0.923 0.916 0.937 0.916 0.960 0.963 0.949 0.960 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
27. ZK381.4 pgl-1 20651 7.519 0.893 0.929 0.961 0.929 0.951 0.945 0.956 0.955 P granule abnormality protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZQ3]
28. B0252.4 cyn-10 3765 7.518 0.929 0.907 0.925 0.907 0.975 0.948 0.970 0.957 Peptidyl-prolyl cis-trans isomerase 10 [Source:UniProtKB/Swiss-Prot;Acc:P52017]
29. T05G5.10 iff-1 42569 7.517 0.913 0.924 0.923 0.924 0.973 0.951 0.969 0.940 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
30. F22B5.1 evl-20 2117 7.517 0.941 0.915 0.956 0.915 0.961 0.946 0.922 0.961 ADP-ribosylation factor-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19705]
31. K12C11.2 smo-1 12784 7.516 0.945 0.875 0.930 0.875 0.981 0.969 0.985 0.956 Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
32. T01E8.6 mrps-14 9328 7.514 0.962 0.911 0.894 0.911 0.966 0.943 0.977 0.950 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
33. ZK328.2 eftu-2 7040 7.509 0.880 0.918 0.952 0.918 0.979 0.970 0.938 0.954 Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
34. Y65B4BL.2 deps-1 18277 7.507 0.880 0.923 0.942 0.923 0.980 0.970 0.959 0.930
35. T22F3.4 rpl-11.1 68403 7.505 0.887 0.948 0.937 0.948 0.978 0.873 0.971 0.963 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
36. ZK652.1 snr-5 5993 7.504 0.941 0.889 0.934 0.889 0.977 0.961 0.950 0.963 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
37. D2030.6 prg-1 26751 7.504 0.890 0.928 0.925 0.928 0.960 0.973 0.970 0.930 Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
38. C08B11.6 arp-6 4646 7.503 0.942 0.918 0.936 0.918 0.950 0.958 0.957 0.924 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
39. Y46G5A.4 snrp-200 13827 7.498 0.862 0.910 0.928 0.910 0.982 0.985 0.963 0.958 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
40. T21G5.3 glh-1 16470 7.498 0.861 0.902 0.928 0.902 0.987 0.973 0.961 0.984 ATP-dependent RNA helicase glh-1 [Source:UniProtKB/Swiss-Prot;Acc:P34689]
41. Y73B6BL.32 lsm-8 11002 7.496 0.961 0.933 0.943 0.933 0.953 0.915 0.921 0.937 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
42. ZK381.1 him-3 4913 7.496 0.961 0.936 0.921 0.936 0.940 0.960 0.954 0.888 High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
43. C05D11.10 mrps-17 4613 7.496 0.922 0.920 0.910 0.920 0.970 0.938 0.951 0.965 28S ribosomal protein S17, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q11189]
44. Y66D12A.22 tin-10 6041 7.495 0.964 0.898 0.900 0.898 0.958 0.934 0.966 0.977 Mitochondrial import inner membrane translocase subunit Tim10 [Source:UniProtKB/Swiss-Prot;Acc:Q9Y0V6]
45. B0261.4 mrpl-47 8210 7.495 0.915 0.929 0.936 0.929 0.969 0.959 0.954 0.904 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
46. T16G1.11 eif-3.K 14014 7.493 0.947 0.912 0.885 0.912 0.967 0.959 0.980 0.931 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
47. Y37E3.15 npp-13 7250 7.492 0.928 0.893 0.930 0.893 0.950 0.980 0.952 0.966 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
48. F56D12.5 vig-1 42594 7.491 0.916 0.884 0.916 0.884 0.972 0.988 0.966 0.965 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
49. F29C4.6 tut-1 5637 7.489 0.927 0.919 0.946 0.919 0.975 0.949 0.922 0.932 Cytoplasmic tRNA 2-thiolation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O76365]
50. W02F12.6 sna-1 7338 7.489 0.923 0.901 0.930 0.901 0.971 0.975 0.947 0.941 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
51. Y18D10A.19 fkb-2 48128 7.488 0.913 0.898 0.894 0.898 0.984 0.962 0.975 0.964 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
52. F10E9.7 F10E9.7 1842 7.487 0.942 0.883 0.940 0.883 0.967 0.964 0.941 0.967
53. Y53C12B.3 nos-3 20231 7.483 0.914 0.915 0.922 0.915 0.944 0.973 0.934 0.966 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
54. Y40B1B.5 eif-3.J 15061 7.482 0.928 0.928 0.939 0.928 0.957 0.929 0.939 0.934 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
55. T17E9.2 nmt-1 8017 7.482 0.941 0.896 0.912 0.896 0.950 0.944 0.979 0.964 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
56. F58E10.3 ddx-17 15107 7.481 0.940 0.907 0.926 0.907 0.969 0.950 0.923 0.959 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
57. C36B1.3 rpb-3 4442 7.479 0.957 0.883 0.966 0.883 0.963 0.948 0.958 0.921 RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
58. F32H2.1 snpc-4 7581 7.478 0.934 0.886 0.900 0.886 0.967 0.975 0.965 0.965 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
59. R09B3.5 mag-1 7496 7.478 0.954 0.904 0.935 0.904 0.963 0.958 0.956 0.904 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
60. Y110A7A.8 prp-31 4436 7.477 0.909 0.899 0.967 0.899 0.972 0.952 0.920 0.959 yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_491527]
61. Y73F8A.34 tag-349 7966 7.476 0.934 0.902 0.931 0.902 0.951 0.951 0.971 0.934
62. Y37D8A.18 mrps-10 4551 7.476 0.940 0.898 0.943 0.898 0.967 0.964 0.954 0.912 Probable 28S ribosomal protein S10, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV5]
63. T08B2.9 fars-1 12650 7.475 0.953 0.916 0.901 0.916 0.984 0.936 0.964 0.905 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
64. F42A6.7 hrp-1 28201 7.474 0.936 0.880 0.915 0.880 0.973 0.965 0.970 0.955 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
65. T14B4.3 T14B4.3 2875 7.474 0.944 0.882 0.916 0.882 0.984 0.930 0.955 0.981
66. F56D2.6 ddx-15 12282 7.473 0.899 0.886 0.931 0.886 0.960 0.988 0.950 0.973 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
67. T03D8.2 mrps-12 8253 7.473 0.912 0.913 0.917 0.913 0.962 0.971 0.930 0.955 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]
68. Y37D8A.11 cec-7 8801 7.472 0.921 0.911 0.935 0.911 0.971 0.960 0.925 0.938 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
69. C08B11.5 sap-49 10553 7.472 0.939 0.874 0.903 0.874 0.985 0.964 0.971 0.962 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
70. C27H5.3 fust-1 6978 7.471 0.910 0.896 0.907 0.896 0.968 0.986 0.934 0.974 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
71. C34E10.5 prmt-5 12277 7.47 0.906 0.910 0.941 0.910 0.954 0.976 0.957 0.916 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
72. C25D7.8 otub-1 7941 7.47 0.946 0.898 0.941 0.898 0.975 0.947 0.954 0.911 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
73. T21C9.12 scpl-4 14723 7.469 0.902 0.923 0.903 0.923 0.973 0.981 0.951 0.913 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
74. T10C6.4 srx-44 8454 7.466 0.934 0.918 0.943 0.918 0.943 0.929 0.967 0.914 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
75. F28B3.8 imb-1 7515 7.466 0.876 0.911 0.937 0.911 0.983 0.949 0.963 0.936 IMportin Beta family [Source:RefSeq peptide;Acc:NP_491477]
76. Y111B2A.18 rsp-3 43731 7.465 0.928 0.887 0.938 0.887 0.976 0.944 0.965 0.940 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
77. C47B2.9 C47B2.9 4096 7.465 0.965 0.879 0.917 0.879 0.984 0.957 0.914 0.970
78. F56F3.1 ifet-1 25772 7.464 0.915 0.895 0.933 0.895 0.964 0.960 0.957 0.945 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
79. F46B6.3 smg-4 4959 7.463 0.932 0.892 0.961 0.892 0.960 0.959 0.927 0.940 Suppressor with Morphological effect on Genitalia [Source:RefSeq peptide;Acc:NP_741600]
80. F52C9.7 mog-3 9880 7.461 0.909 0.896 0.930 0.896 0.963 0.970 0.968 0.929 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
81. B0025.2 csn-2 5205 7.459 0.943 0.902 0.934 0.902 0.964 0.912 0.952 0.950 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
82. Y54E5A.4 npp-4 6288 7.458 0.941 0.875 0.924 0.875 0.975 0.954 0.960 0.954 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
83. C26B2.6 elpc-4 3600 7.458 0.950 0.925 0.933 0.925 0.967 0.923 0.948 0.887 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
84. C30C11.1 mrpl-32 5238 7.458 0.931 0.923 0.931 0.923 0.969 0.961 0.937 0.883 Probable 39S ribosomal protein L32, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q04907]
85. Y54H5A.2 Y54H5A.2 2168 7.457 0.911 0.925 0.944 0.925 0.953 0.929 0.919 0.951
86. F46A9.4 skr-2 16831 7.457 0.937 0.894 0.912 0.894 0.971 0.947 0.956 0.946 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
87. C49H3.4 C49H3.4 648 7.456 0.961 0.876 0.924 0.876 0.972 0.955 0.925 0.967
88. C08F8.1 pfd-1 10199 7.456 0.942 0.936 0.944 0.936 0.955 0.941 0.928 0.874 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
89. Y39G10AR.7 ekl-7 7072 7.455 0.913 0.870 0.937 0.870 0.984 0.969 0.959 0.953
90. Y116A8C.42 snr-1 17062 7.455 0.947 0.899 0.923 0.899 0.948 0.973 0.936 0.930 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
91. F33D4.5 mrpl-1 5337 7.454 0.960 0.863 0.926 0.863 0.973 0.971 0.946 0.952 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
92. Y18D10A.25 fkb-8 8968 7.453 0.922 0.910 0.894 0.910 0.980 0.932 0.980 0.925 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
93. W06H3.3 ctps-1 8363 7.452 0.953 0.891 0.903 0.891 0.946 0.976 0.941 0.951 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
94. H27M09.3 syp-4 5331 7.452 0.908 0.944 0.953 0.944 0.947 0.920 0.927 0.909
95. T12G3.5 mrpl-51 5192 7.451 0.966 0.899 0.909 0.899 0.941 0.943 0.927 0.967 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
96. ZK616.6 perm-3 16186 7.45 0.942 0.886 0.955 0.886 0.954 0.958 0.945 0.924 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
97. C15F1.4 ppp-1 1774 7.45 0.925 0.905 0.900 0.905 0.985 0.940 0.967 0.923 Probable translation initiation factor eIF-2B subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:P80361]
98. K08E3.8 mdt-29 4678 7.45 0.921 0.900 0.938 0.900 0.937 0.948 0.975 0.931 Mediator of RNA polymerase II transcription subunit 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUS2]
99. Y34D9A.1 mrpl-38 5291 7.45 0.937 0.895 0.917 0.895 0.970 0.966 0.963 0.907 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_490808]
100. T23B12.3 mrps-2 5434 7.446 0.939 0.901 0.911 0.901 0.964 0.945 0.923 0.962 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_505180]

There are 1385 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA