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Results for Y39B6A.40

Gene ID Gene Name Reads Transcripts Annotation
Y39B6A.40 sws-1 1067 Y39B6A.40a, Y39B6A.40b, Y39B6A.40c, Y39B6A.40d SWS1 homolog [Source:RefSeq peptide;Acc:NP_741657]

Genes with expression patterns similar to Y39B6A.40

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y39B6A.40 sws-1 1067 6 1.000 1.000 1.000 1.000 - 1.000 1.000 - SWS1 homolog [Source:RefSeq peptide;Acc:NP_741657]
2. Y56A3A.17 npp-16 5391 5.642 0.912 0.956 0.897 0.956 - 0.973 0.948 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
3. Y17G7A.1 hmg-12 29989 5.641 0.883 0.923 0.950 0.923 - 0.984 0.978 - HMG [Source:RefSeq peptide;Acc:NP_496544]
4. K01G5.4 ran-1 32379 5.634 0.905 0.936 0.925 0.936 - 0.958 0.974 - GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
5. ZK381.1 him-3 4913 5.631 0.937 0.912 0.940 0.912 - 0.965 0.965 - High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
6. C48B4.11 C48B4.11 4384 5.624 0.913 0.922 0.933 0.922 - 0.977 0.957 -
7. C33H5.12 rsp-6 23342 5.622 0.921 0.937 0.915 0.937 - 0.955 0.957 - Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
8. T23H2.1 npp-12 12425 5.62 0.897 0.930 0.940 0.930 - 0.962 0.961 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
9. K02F2.4 ulp-5 3433 5.606 0.913 0.917 0.947 0.917 - 0.983 0.929 - Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
10. Y113G7B.5 fog-2 2753 5.604 0.866 0.938 0.935 0.938 - 0.972 0.955 - Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
11. F59A2.1 npp-9 34375 5.6 0.925 0.922 0.947 0.922 - 0.964 0.920 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
12. F23F1.1 nfyc-1 9983 5.599 0.901 0.923 0.914 0.923 - 0.980 0.958 - Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
13. R53.2 dtmk-1 6821 5.594 0.896 0.933 0.911 0.933 - 0.958 0.963 - Thymidylate kinase [Source:UniProtKB/Swiss-Prot;Acc:Q22018]
14. T28D9.2 rsp-5 6460 5.594 0.913 0.919 0.914 0.919 - 0.971 0.958 - Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
15. F10G7.3 unc-85 5206 5.59 0.865 0.953 0.883 0.953 - 0.986 0.950 - Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
16. F32H2.1 snpc-4 7581 5.58 0.912 0.930 0.893 0.930 - 0.971 0.944 - snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
17. W02B12.3 rsp-1 9235 5.58 0.904 0.919 0.926 0.919 - 0.977 0.935 - Probable splicing factor, arginine/serine-rich 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23121]
18. C43E11.1 acin-1 7781 5.58 0.881 0.941 0.955 0.941 - 0.944 0.918 - ACINus (mammalian Apoptotic Chromatin condensation Inducer in the Nucleus) homolog [Source:RefSeq peptide;Acc:NP_491344]
19. F56D2.6 ddx-15 12282 5.574 0.885 0.918 0.941 0.918 - 0.967 0.945 - Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
20. Y116A8C.42 snr-1 17062 5.574 0.913 0.922 0.901 0.922 - 0.984 0.932 - Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
21. T23B5.1 prmt-3 10677 5.573 0.899 0.924 0.936 0.924 - 0.957 0.933 - PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
22. B0414.3 hil-5 10816 5.571 0.898 0.922 0.926 0.922 - 0.985 0.918 - Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
23. F35G12.12 F35G12.12 5761 5.57 0.917 0.911 0.933 0.911 - 0.972 0.926 -
24. K01G5.8 K01G5.8 4694 5.57 0.903 0.927 0.913 0.927 - 0.988 0.912 -
25. Y53C12B.3 nos-3 20231 5.569 0.890 0.937 0.915 0.937 - 0.956 0.934 - NanOS related [Source:RefSeq peptide;Acc:NP_496101]
26. F42A6.7 hrp-1 28201 5.569 0.905 0.923 0.924 0.923 - 0.936 0.958 - Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
27. C26D10.2 hel-1 28697 5.568 0.942 0.918 0.893 0.918 - 0.942 0.955 - Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]
28. Y46G5A.4 snrp-200 13827 5.567 0.867 0.924 0.918 0.924 - 0.966 0.968 - Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
29. C26E6.4 rpb-2 7053 5.565 0.918 0.920 0.918 0.920 - 0.951 0.938 - DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
30. B0464.9 B0464.9 2997 5.562 0.926 0.907 0.928 0.907 - 0.967 0.927 - Probable protein phosphatase methylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BIB3]
31. W06E11.4 sbds-1 6701 5.559 0.879 0.935 0.930 0.935 - 0.967 0.913 - Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
32. Y18D10A.16 Y18D10A.16 2881 5.559 0.887 0.910 0.933 0.910 - 0.985 0.934 -
33. C07E3.2 pro-2 4193 5.559 0.858 0.933 0.941 0.933 - 0.975 0.919 - Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
34. F21C3.4 rde-2 6286 5.558 0.930 0.915 0.914 0.915 - 0.966 0.918 -
35. Y37D8A.11 cec-7 8801 5.557 0.869 0.925 0.920 0.925 - 0.984 0.934 - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
36. M01D7.6 emr-1 4358 5.555 0.927 0.918 0.892 0.918 - 0.957 0.943 - Emerin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:O01971]
37. C04H5.6 mog-4 4517 5.555 0.847 0.938 0.906 0.938 - 0.970 0.956 - Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
38. Y37E3.3 rpb-10 4051 5.553 0.913 0.912 0.939 0.912 - 0.971 0.906 - DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Source:UniProtKB/Swiss-Prot;Acc:Q9GR61]
39. D1081.8 cdc-5L 8553 5.553 0.854 0.942 0.932 0.942 - 0.959 0.924 - Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_492303]
40. F32E10.6 cec-5 10643 5.553 0.918 0.913 0.916 0.913 - 0.957 0.936 - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
41. F02A9.6 glp-1 5613 5.552 0.850 0.924 0.913 0.924 - 0.985 0.956 -
42. F52C9.7 mog-3 9880 5.552 0.888 0.925 0.905 0.925 - 0.948 0.961 - Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
43. Y37D8A.9 mrg-1 14369 5.552 0.899 0.931 0.914 0.931 - 0.976 0.901 - human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
44. D2030.8 D2030.8 2645 5.551 0.861 0.934 0.944 0.934 - 0.956 0.922 -
45. F31C3.5 psf-2 1813 5.549 0.886 0.900 0.948 0.900 - 0.978 0.937 - Probable DNA replication complex GINS protein PSF2 [Source:UniProtKB/Swiss-Prot;Acc:O62193]
46. C27H6.3 tofu-1 2992 5.549 0.914 0.918 0.914 0.918 - 0.985 0.900 - Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_505568]
47. T01E8.6 mrps-14 9328 5.549 0.899 0.930 0.893 0.930 - 0.953 0.944 - Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
48. C36B1.3 rpb-3 4442 5.549 0.913 0.925 0.917 0.925 - 0.952 0.917 - RNA Polymerase II (B) subunit [Source:RefSeq peptide;Acc:NP_492361]
49. Y62E10A.11 mdt-9 5971 5.547 0.889 0.928 0.918 0.928 - 0.950 0.934 - MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
50. Y38A8.3 ulp-2 7403 5.546 0.865 0.931 0.929 0.931 - 0.957 0.933 - Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
51. Y65B4BL.2 deps-1 18277 5.543 0.860 0.919 0.935 0.919 - 0.962 0.948 -
52. T16G1.11 eif-3.K 14014 5.543 0.890 0.930 0.894 0.930 - 0.933 0.966 - Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
53. R13F6.10 cra-1 11610 5.539 0.861 0.927 0.921 0.927 - 0.966 0.937 - N-terminal acetyltransferase B complex subunit NAA25 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21986]
54. K12D12.2 npp-3 6914 5.539 0.879 0.928 0.906 0.928 - 0.948 0.950 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
55. Y23H5B.6 Y23H5B.6 5886 5.539 0.893 0.902 0.932 0.902 - 0.980 0.930 -
56. PAR2.1 mtss-1 4055 5.539 0.841 0.935 0.896 0.935 - 0.978 0.954 - Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
57. Y56A3A.29 ung-1 1900 5.539 0.877 0.913 0.916 0.913 - 0.981 0.939 - Uracil DNA N-Glycosylase [Source:RefSeq peptide;Acc:NP_001255149]
58. F25H8.2 F25H8.2 3019 5.536 0.925 0.935 0.919 0.935 - 0.958 0.864 -
59. C05C8.5 C05C8.5 2655 5.533 0.892 0.902 0.911 0.902 - 0.958 0.968 -
60. B0035.12 sart-3 7188 5.532 0.936 0.890 0.907 0.890 - 0.965 0.944 - human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
61. W08D2.7 mtr-4 2699 5.531 0.869 0.912 0.915 0.912 - 0.958 0.965 - mRNA transport homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23223]
62. F18C5.2 wrn-1 3792 5.53 0.862 0.924 0.929 0.924 - 0.965 0.926 - Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
63. R53.6 psf-1 4721 5.529 0.870 0.914 0.880 0.914 - 0.983 0.968 - Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
64. K12C11.2 smo-1 12784 5.528 0.894 0.906 0.901 0.906 - 0.971 0.950 - Small ubiquitin-related modifier [Source:UniProtKB/Swiss-Prot;Acc:P55853]
65. C04G2.6 dis-3 5048 5.526 0.902 0.920 0.925 0.920 - 0.970 0.889 - Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
66. Y39G10AR.7 ekl-7 7072 5.525 0.858 0.904 0.936 0.904 - 0.978 0.945 -
67. W02D9.1 pri-2 6048 5.523 0.861 0.931 0.892 0.931 - 0.960 0.948 - DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
68. C06A5.9 rnf-1 2469 5.522 0.836 0.915 0.925 0.915 - 0.947 0.984 - RiNg Finger protein [Source:RefSeq peptide;Acc:NP_491738]
69. Y54E10A.11 Y54E10A.11 2415 5.522 0.920 0.911 0.931 0.911 - 0.961 0.888 - E3 ubiquitin-protein ligase listerin [Source:UniProtKB/Swiss-Prot;Acc:Q65XX2]
70. Y71G12B.9 lin-65 7476 5.52 0.871 0.913 0.947 0.913 - 0.975 0.901 - LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
71. F56D12.5 vig-1 42594 5.52 0.880 0.917 0.866 0.917 - 0.970 0.970 - VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
72. H12I13.4 fbf-1 5587 5.52 0.836 0.927 0.945 0.927 - 0.968 0.917 - Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]
73. Y39G10AR.14 mcm-4 4312 5.52 0.898 0.910 0.901 0.910 - 0.982 0.919 - yeast MCM (licensing factor) related [Source:RefSeq peptide;Acc:NP_001293322]
74. W03F8.4 W03F8.4 20285 5.519 0.894 0.917 0.921 0.917 - 0.952 0.918 -
75. F58F6.4 rfc-2 2074 5.519 0.886 0.879 0.952 0.879 - 0.985 0.938 - RFC (DNA replication factor) family [Source:RefSeq peptide;Acc:NP_500069]
76. T25G3.4 T25G3.4 9394 5.518 0.884 0.923 0.925 0.923 - 0.958 0.905 - Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
77. F09F7.3 rpc-2 9751 5.516 0.883 0.927 0.883 0.927 - 0.976 0.920 - DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_498192]
78. F59E12.2 zyg-1 1718 5.512 0.859 0.908 0.900 0.908 - 0.974 0.963 - Probable serine/threonine-protein kinase zyg-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GT24]
79. F53A3.2 polh-1 2467 5.512 0.825 0.932 0.924 0.932 - 0.962 0.937 - POLH (DNA polymerase eta) homolog [Source:RefSeq peptide;Acc:NP_497480]
80. T05H4.14 gad-1 7979 5.512 0.899 0.920 0.905 0.920 - 0.951 0.917 - Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
81. C06A1.5 rpb-6 7515 5.511 0.908 0.892 0.900 0.892 - 0.959 0.960 - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
82. F33D4.5 mrpl-1 5337 5.511 0.916 0.883 0.933 0.883 - 0.933 0.963 - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
83. W06H3.3 ctps-1 8363 5.51 0.910 0.909 0.911 0.909 - 0.962 0.909 - CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
84. C08B11.5 sap-49 10553 5.51 0.908 0.900 0.895 0.900 - 0.946 0.961 - Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
85. ZK1128.6 ttll-4 6059 5.509 0.946 0.910 0.908 0.910 - 0.958 0.877 - Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
86. C34E10.5 prmt-5 12277 5.507 0.865 0.908 0.919 0.908 - 0.953 0.954 - Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
87. C30G12.7 puf-8 5785 5.507 0.864 0.933 0.936 0.933 - 0.971 0.870 - PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_495523]
88. Y39E4B.2 snpc-1.2 5800 5.507 0.884 0.913 0.935 0.913 - 0.987 0.875 - SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
89. B0414.6 glh-3 2050 5.506 0.863 0.915 0.931 0.915 - 0.957 0.925 - ATP-dependent RNA helicase glh-3 [Source:UniProtKB/Swiss-Prot;Acc:O01836]
90. ZK970.3 mdt-22 1925 5.505 0.880 0.936 0.889 0.936 - 0.957 0.907 - Mediator of RNA polymerase II transcription subunit 22 [Source:UniProtKB/Swiss-Prot;Acc:Q23679]
91. C26D10.1 ran-3 11111 5.505 0.891 0.917 0.893 0.917 - 0.982 0.905 - Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
92. C02F5.4 cids-1 3125 5.505 0.901 0.921 0.919 0.921 - 0.957 0.886 - CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
93. C01F6.8 icln-1 6586 5.505 0.900 0.920 0.906 0.920 - 0.968 0.891 - ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
94. T26A5.5 jhdm-1 12698 5.504 0.880 0.915 0.937 0.915 - 0.962 0.895 - JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
95. F26B1.3 ima-2 18826 5.5 0.855 0.914 0.920 0.914 - 0.990 0.907 - Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
96. C18G1.5 hil-4 21692 5.5 0.858 0.908 0.916 0.908 - 0.963 0.947 - Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
97. T03F6.2 dnj-17 3150 5.499 0.898 0.894 0.898 0.894 - 0.958 0.957 - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_499759]
98. Y54E5A.6 Y54E5A.6 770 5.498 0.926 0.889 0.917 0.889 - 0.971 0.906 -
99. F14B4.3 rpoa-2 7549 5.498 0.894 0.902 0.909 0.902 - 0.985 0.906 - DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
100. W08E3.1 snr-2 14849 5.497 0.879 0.908 0.941 0.908 - 0.975 0.886 - Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA