C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T28A8.4

Gene ID Gene Name Reads Transcripts Annotation
T28A8.4 T28A8.4 4472 T28A8.4

Genes with expression patterns similar to T28A8.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T28A8.4 T28A8.4 4472 7 1.000 1.000 1.000 1.000 1.000 1.000 1.000 -
2. Y38E10A.6 ceh-100 5505 6.64 0.909 0.982 0.938 0.982 0.954 0.950 0.925 - C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_001022428]
3. T26A5.5 jhdm-1 12698 6.597 0.909 0.979 0.945 0.979 0.933 0.962 0.890 - JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
4. Y39E4B.2 snpc-1.2 5800 6.582 0.940 0.979 0.950 0.979 0.947 0.956 0.831 - SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
5. T05E8.3 let-355 8169 6.574 0.886 0.974 0.939 0.974 0.924 0.941 0.936 -
6. Y71G12B.9 lin-65 7476 6.572 0.881 0.977 0.932 0.977 0.952 0.958 0.895 - LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
7. ZK328.2 eftu-2 7040 6.567 0.900 0.964 0.925 0.964 0.930 0.973 0.911 - Elongation Factor TU family [Source:RefSeq peptide;Acc:NP_498308]
8. T28D9.2 rsp-5 6460 6.566 0.891 0.985 0.953 0.985 0.924 0.916 0.912 - Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
9. Y37D8A.11 cec-7 8801 6.562 0.910 0.968 0.939 0.968 0.959 0.932 0.886 - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
10. F18C5.2 wrn-1 3792 6.562 0.896 0.968 0.941 0.968 0.946 0.963 0.880 - Probable Werner syndrome ATP-dependent helicase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19546]
11. F02A9.6 glp-1 5613 6.559 0.863 0.965 0.949 0.965 0.965 0.925 0.927 -
12. F59E12.2 zyg-1 1718 6.558 0.874 0.964 0.939 0.964 0.901 0.964 0.952 - Probable serine/threonine-protein kinase zyg-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GT24]
13. Y23H5B.6 Y23H5B.6 5886 6.557 0.908 0.978 0.935 0.978 0.966 0.916 0.876 -
14. F56D2.6 ddx-15 12282 6.557 0.902 0.968 0.926 0.968 0.942 0.953 0.898 - Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 [Source:UniProtKB/Swiss-Prot;Acc:Q20875]
15. F14B4.3 rpoa-2 7549 6.555 0.915 0.984 0.928 0.984 0.951 0.934 0.859 - DNA-directed RNA polymerase [Source:RefSeq peptide;Acc:NP_492476]
16. W08D2.7 mtr-4 2699 6.555 0.892 0.963 0.941 0.963 0.916 0.958 0.922 - mRNA transport homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q23223]
17. Y17G7A.1 hmg-12 29989 6.555 0.866 0.975 0.928 0.975 0.968 0.953 0.890 - HMG [Source:RefSeq peptide;Acc:NP_496544]
18. D2030.6 prg-1 26751 6.543 0.922 0.975 0.941 0.975 0.924 0.946 0.860 - Piwi-like protein [Source:RefSeq peptide;Acc:NP_492121]
19. ZK381.1 him-3 4913 6.541 0.886 0.977 0.936 0.977 0.945 0.934 0.886 - High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_501078]
20. Y65B4BL.2 deps-1 18277 6.541 0.888 0.979 0.945 0.979 0.928 0.953 0.869 -
21. Y116A8C.42 snr-1 17062 6.541 0.862 0.984 0.920 0.984 0.954 0.955 0.882 - Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
22. Y46G5A.4 snrp-200 13827 6.54 0.878 0.963 0.922 0.963 0.929 0.965 0.920 - Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
23. ZK856.13 tftc-3 2960 6.538 0.819 0.975 0.954 0.975 0.964 0.962 0.889 - Transcription Factor ThreeC subunit (GTF3C homolog) [Source:RefSeq peptide;Acc:NP_505626]
24. B0035.12 sart-3 7188 6.534 0.897 0.988 0.911 0.988 0.952 0.909 0.889 - human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
25. F59E10.1 orc-2 4698 6.533 0.859 0.962 0.961 0.962 0.902 0.947 0.940 - Origin recognition complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21037]
26. F52C9.7 mog-3 9880 6.533 0.862 0.954 0.944 0.954 0.943 0.959 0.917 - Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
27. F26B1.3 ima-2 18826 6.529 0.882 0.936 0.970 0.936 0.971 0.970 0.864 - Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
28. Y37E3.15 npp-13 7250 6.528 0.898 0.946 0.896 0.946 0.957 0.959 0.926 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_001293351]
29. C14A4.4 crn-3 6558 6.527 0.909 0.981 0.888 0.981 0.886 0.980 0.902 - Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_871964]
30. C48B4.11 C48B4.11 4384 6.526 0.867 0.978 0.953 0.978 0.937 0.945 0.868 -
31. C26D10.1 ran-3 11111 6.523 0.889 0.972 0.884 0.972 0.947 0.950 0.909 - Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
32. Y43F4B.3 set-25 8036 6.52 0.904 0.961 0.965 0.961 0.955 0.895 0.879 - SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
33. Y53C12B.3 nos-3 20231 6.52 0.860 0.977 0.907 0.977 0.949 0.963 0.887 - NanOS related [Source:RefSeq peptide;Acc:NP_496101]
34. F56D1.7 daz-1 23684 6.52 0.911 0.990 0.951 0.990 0.885 0.914 0.879 - DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
35. K05C4.7 K05C4.7 3429 6.519 0.908 0.942 0.933 0.942 0.926 0.952 0.916 - Armadillo repeat-containing protein 1 [Source:RefSeq peptide;Acc:NP_493565]
36. F01F1.7 ddx-23 4217 6.518 0.902 0.966 0.855 0.966 0.944 0.966 0.919 - DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_498260]
37. K02F2.4 ulp-5 3433 6.517 0.861 0.950 0.952 0.950 0.922 0.964 0.918 - Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_491952]
38. T23H2.1 npp-12 12425 6.516 0.899 0.951 0.936 0.951 0.932 0.931 0.916 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
39. B0464.2 ctr-9 7610 6.516 0.881 0.961 0.943 0.961 0.927 0.969 0.874 - RNA polymerase-associated protein CTR9 [Source:UniProtKB/Swiss-Prot;Acc:Q03560]
40. W02D9.1 pri-2 6048 6.512 0.866 0.960 0.946 0.960 0.912 0.979 0.889 - DNA primase large subunit [Source:UniProtKB/Swiss-Prot;Acc:O02334]
41. F33D4.5 mrpl-1 5337 6.511 0.867 0.962 0.910 0.962 0.938 0.924 0.948 - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
42. ZK1128.6 ttll-4 6059 6.51 0.860 0.979 0.956 0.979 0.951 0.893 0.892 - Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
43. Y37D8A.9 mrg-1 14369 6.509 0.862 0.965 0.946 0.965 0.960 0.940 0.871 - human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
44. T27E9.5 pssy-2 2579 6.509 0.856 0.959 0.934 0.959 0.933 0.945 0.923 - PhosphatidylSerine SYnthase [Source:RefSeq peptide;Acc:NP_499786]
45. C08B11.2 hda-2 2313 6.503 0.847 0.955 0.890 0.955 0.931 0.951 0.974 - Putative histone deacetylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09440]
46. T23B5.1 prmt-3 10677 6.503 0.879 0.933 0.958 0.933 0.938 0.950 0.912 - PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
47. C34E10.5 prmt-5 12277 6.502 0.849 0.984 0.915 0.984 0.927 0.927 0.916 - Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
48. B0414.3 hil-5 10816 6.5 0.856 0.969 0.929 0.969 0.944 0.958 0.875 - Histone H1.5 [Source:UniProtKB/Swiss-Prot;Acc:O01833]
49. F10E9.7 F10E9.7 1842 6.5 0.850 0.948 0.923 0.948 0.960 0.954 0.917 -
50. F55G1.8 plk-3 12036 6.5 0.883 0.958 0.944 0.958 0.950 0.923 0.884 - Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
51. F37C12.13 exos-9 2660 6.5 0.924 0.959 0.828 0.959 0.943 0.949 0.938 - EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_741217]
52. C05C8.6 hpo-9 8263 6.499 0.896 0.960 0.940 0.960 0.933 0.897 0.913 -
53. F49D11.1 prp-17 5338 6.498 0.904 0.962 0.919 0.962 0.949 0.921 0.881 - yeast PRP (splicing factor) related [Source:RefSeq peptide;Acc:NP_492851]
54. F59A2.1 npp-9 34375 6.496 0.905 0.946 0.940 0.946 0.959 0.908 0.892 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
55. E01A2.4 let-504 9788 6.496 0.871 0.961 0.893 0.961 0.928 0.943 0.939 -
56. Y56A3A.17 npp-16 5391 6.494 0.845 0.946 0.938 0.946 0.926 0.973 0.920 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
57. F52F12.4 lsl-1 4055 6.494 0.860 0.973 0.900 0.973 0.946 0.939 0.903 - LSY-2-Like [Source:RefSeq peptide;Acc:NP_492621]
58. Y41D4B.19 npp-8 12992 6.494 0.876 0.969 0.937 0.969 0.949 0.896 0.898 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
59. H12I13.4 fbf-1 5587 6.492 0.875 0.966 0.947 0.966 0.913 0.977 0.848 - Fem-3 mRNA-binding factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M6]
60. Y47D3A.26 smc-3 6256 6.489 0.941 0.973 0.942 0.973 0.940 0.863 0.857 - Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
61. F45E4.9 hmg-5 2061 6.489 0.878 0.972 0.867 0.972 0.943 0.962 0.895 - HMG [Source:RefSeq peptide;Acc:NP_501245]
62. Y38A8.3 ulp-2 7403 6.487 0.880 0.958 0.905 0.958 0.924 0.925 0.937 - Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
63. Y18D10A.1 attf-6 6942 6.484 0.885 0.975 0.910 0.975 0.912 0.973 0.854 - AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_871800]
64. C04G2.6 dis-3 5048 6.482 0.909 0.982 0.935 0.982 0.919 0.922 0.833 - Probable exosome complex exonuclease RRP44 [Source:UniProtKB/Swiss-Prot;Acc:Q17632]
65. K01G5.4 ran-1 32379 6.481 0.846 0.966 0.932 0.966 0.916 0.950 0.905 - GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
66. Y40B1B.6 spr-5 6252 6.481 0.864 0.948 0.960 0.948 0.920 0.898 0.943 - Probable lysine-specific histone demethylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWP6]
67. R05D3.11 met-2 3364 6.48 0.890 0.954 0.912 0.954 0.917 0.916 0.937 - Histone-lysine N-methyltransferase met-2 [Source:UniProtKB/Swiss-Prot;Acc:P34544]
68. F32H2.1 snpc-4 7581 6.479 0.883 0.960 0.921 0.960 0.940 0.943 0.872 - snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
69. Y80D3A.2 emb-4 3717 6.477 0.929 0.965 0.915 0.965 0.877 0.932 0.894 -
70. F45E12.2 brf-1 4667 6.476 0.875 0.959 0.925 0.959 0.960 0.936 0.862 - BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
71. F23F1.1 nfyc-1 9983 6.474 0.873 0.962 0.928 0.962 0.939 0.935 0.875 - Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
72. Y54E5A.4 npp-4 6288 6.473 0.835 0.956 0.953 0.956 0.938 0.918 0.917 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
73. Y43C5A.5 thk-1 2504 6.473 0.806 0.944 0.972 0.944 0.903 0.961 0.943 - Thymidine kinase [Source:RefSeq peptide;Acc:NP_001255477]
74. F35G12.12 F35G12.12 5761 6.47 0.847 0.952 0.925 0.952 0.944 0.943 0.907 -
75. C04H5.6 mog-4 4517 6.47 0.833 0.957 0.895 0.957 0.951 0.957 0.920 - Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 [Source:UniProtKB/Swiss-Prot;Acc:O45244]
76. C34B7.4 mys-4 3249 6.467 0.813 0.934 0.968 0.934 0.918 0.956 0.944 - Histone acetyltransferase [Source:RefSeq peptide;Acc:NP_492265]
77. C26E6.4 rpb-2 7053 6.467 0.872 0.972 0.893 0.972 0.944 0.925 0.889 - DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
78. Y37A1B.1 lst-3 10739 6.467 0.906 0.974 0.907 0.974 0.899 0.940 0.867 - Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001255780]
79. Y113G7A.8 fre-1 1485 6.466 0.889 0.956 0.874 0.956 0.958 0.917 0.916 - NADPH-dependent diflavin oxidoreductase 1 [Source:RefSeq peptide;Acc:NP_507875]
80. ZK686.4 snu-23 9040 6.466 0.839 0.957 0.967 0.957 0.897 0.934 0.915 - Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
81. F58D5.1 hrp-2 17211 6.466 0.866 0.967 0.897 0.967 0.902 0.951 0.916 - human HnRNP A1 homolog [Source:RefSeq peptide;Acc:NP_493049]
82. T12E12.2 cec-6 4758 6.466 0.876 0.972 0.904 0.972 0.901 0.943 0.898 - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_500828]
83. C27B7.1 spr-2 14958 6.465 0.851 0.961 0.963 0.961 0.911 0.905 0.913 - Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
84. C35D10.9 ced-4 3446 6.465 0.863 0.940 0.941 0.940 0.928 0.896 0.957 - Cell death protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P30429]
85. T22A3.5 pash-1 3240 6.464 0.884 0.976 0.940 0.976 0.892 0.958 0.838 - PArtner of DroSHa (DRSH-1 interactor) [Source:RefSeq peptide;Acc:NP_001293461]
86. Y37H2A.5 fbxa-210 2230 6.464 0.877 0.943 0.950 0.943 0.907 0.950 0.894 - F-box A protein [Source:RefSeq peptide;Acc:NP_001256783]
87. C52E4.6 cyl-1 6405 6.464 0.865 0.970 0.932 0.970 0.917 0.906 0.904 - CYclin L [Source:RefSeq peptide;Acc:NP_506007]
88. K12D12.2 npp-3 6914 6.463 0.870 0.945 0.938 0.945 0.873 0.957 0.935 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_496534]
89. C07E3.2 pro-2 4193 6.462 0.854 0.960 0.898 0.960 0.963 0.930 0.897 - Nucleolar complex protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17580]
90. F55F8.3 F55F8.3 2107 6.461 0.847 0.962 0.860 0.962 0.945 0.954 0.931 - Periodic tryptophan protein 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91341]
91. C55B7.5 uri-1 3156 6.459 0.828 0.962 0.964 0.962 0.948 0.955 0.840 - URI (Unconventional prefoldin RPB5 Interactor) homolog [Source:RefSeq peptide;Acc:NP_491870]
92. F26C11.1 F26C11.1 2758 6.458 0.844 0.937 0.941 0.937 0.937 0.909 0.953 - Putative acid phosphatase F26C11.1 [Source:UniProtKB/Swiss-Prot;Acc:Q09549]
93. F32E10.6 cec-5 10643 6.457 0.862 0.960 0.918 0.960 0.923 0.951 0.883 - C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
94. ZK1320.12 taf-8 3558 6.456 0.839 0.968 0.943 0.968 0.943 0.920 0.875 - TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_001022514]
95. C05D2.5 xnd-1 5516 6.456 0.884 0.975 0.922 0.975 0.961 0.904 0.835 - X chromosome NonDisjunction factor [Source:RefSeq peptide;Acc:NP_498207]
96. K07A12.2 egg-6 18331 6.455 0.821 0.948 0.964 0.948 0.926 0.957 0.891 - Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
97. F25G6.2 symk-1 2880 6.455 0.884 0.955 0.941 0.955 0.954 0.872 0.894 - SYMpleKin cleavage and polyadenylation factor [Source:RefSeq peptide;Acc:NP_505210]
98. T19B4.2 npp-7 13073 6.453 0.870 0.963 0.938 0.963 0.920 0.911 0.888 - Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
99. F18A1.8 pid-1 3751 6.452 0.853 0.941 0.892 0.941 0.955 0.929 0.941 - 21U-RNA biogenesis factor pid-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19541]
100. K07F5.15 K07F5.15 10171 6.452 0.853 0.932 0.903 0.932 0.911 0.958 0.963 -

There are 1561 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA