C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y73B6BL.38

Gene ID Gene Name Reads Transcripts Annotation
Y73B6BL.38 puf-11 15511 Y73B6BL.38 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_741425]

Genes with expression patterns similar to Y73B6BL.38

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y73B6BL.38 puf-11 15511 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_741425]
2. Y45F10A.2 puf-3 22370 7.857 0.990 0.992 0.990 0.992 0.966 0.987 0.970 0.970 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_502606]
3. K06A5.7 cdc-25.1 14961 7.782 0.956 0.979 0.981 0.979 0.968 0.984 0.986 0.949 M-phase inducer phosphatase cdc-25.1 [Source:UniProtKB/Swiss-Prot;Acc:O44552]
4. F26D10.10 gln-5 4588 7.742 0.964 0.990 0.983 0.990 0.946 0.963 0.923 0.983 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_503065]
5. C33H5.15 sgo-1 3674 7.736 0.976 0.955 0.960 0.955 0.973 0.967 0.973 0.977 Shugoshin [Source:UniProtKB/Swiss-Prot;Acc:Q18412]
6. K07A1.2 dut-1 5203 7.72 0.962 0.974 0.980 0.974 0.962 0.975 0.935 0.958 DeoxyUTPase [Source:RefSeq peptide;Acc:NP_001021553]
7. C03C10.3 rnr-2 8430 7.707 0.904 0.983 0.990 0.983 0.948 0.947 0.971 0.981 Ribonucleoside-diphosphate reductase small chain [Source:UniProtKB/Swiss-Prot;Acc:P42170]
8. F32D1.10 mcm-7 21233 7.702 0.965 0.952 0.983 0.952 0.953 0.953 0.987 0.957 DNA helicase [Source:RefSeq peptide;Acc:NP_504199]
9. F18A11.1 puf-6 11201 7.697 0.973 0.960 0.980 0.960 0.974 0.953 0.965 0.932 Pumilio domain-containing protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O01322]
10. K10B2.3 clec-88 12854 7.696 0.904 0.965 0.980 0.965 0.972 0.950 0.991 0.969 C-type lectin domain-containing protein 88 [Source:UniProtKB/Swiss-Prot;Acc:Q86NG3]
11. Y46G5A.5 pisy-1 13040 7.694 0.959 0.968 0.984 0.968 0.951 0.934 0.972 0.958 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
12. C55B7.1 glh-2 3622 7.691 0.978 0.923 0.965 0.923 0.970 0.966 0.983 0.983 ATP-dependent RNA helicase glh-2 [Source:UniProtKB/Swiss-Prot;Acc:Q966L9]
13. F48E8.7 skpt-1 2308 7.691 0.950 0.953 0.960 0.953 0.951 0.974 0.986 0.964 SKP2 (S phase Kinase associated Protein Two) homolog [Source:RefSeq peptide;Acc:NP_741137]
14. C25D7.6 mcm-3 15241 7.682 0.973 0.968 0.970 0.968 0.940 0.941 0.964 0.958 DNA helicase [Source:RefSeq peptide;Acc:NP_506706]
15. R06F6.1 cdl-1 14167 7.676 0.965 0.945 0.982 0.945 0.944 0.948 0.983 0.964 Histone RNA hairpin-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q09599]
16. T24D1.3 T24D1.3 5300 7.671 0.919 0.972 0.953 0.972 0.963 0.935 0.989 0.968
17. W03G1.6 pig-1 5015 7.669 0.959 0.958 0.969 0.958 0.961 0.967 0.966 0.931 Maternal embryonic leucine zipper kinase [Source:UniProtKB/Swiss-Prot;Acc:U4PR86]
18. K07A12.2 egg-6 18331 7.669 0.950 0.943 0.982 0.943 0.969 0.971 0.967 0.944 Leucine-rich repeat-containing protein egg-6 [Source:UniProtKB/Swiss-Prot;Acc:P90920]
19. F26B1.3 ima-2 18826 7.667 0.933 0.940 0.970 0.940 0.968 0.967 0.972 0.977 Importin subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:P91276]
20. F57B10.12 mei-2 1522 7.664 0.966 0.945 0.981 0.945 0.971 0.944 0.942 0.970 Meiotic spindle formation protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O44740]
21. F32D1.6 neg-1 4990 7.662 0.969 0.976 0.982 0.976 0.930 0.935 0.946 0.948 Negative Effect on Gut development [Source:RefSeq peptide;Acc:NP_001256036]
22. W03D2.4 pcn-1 20288 7.659 0.948 0.965 0.974 0.965 0.930 0.933 0.976 0.968 Proliferating cell nuclear antigen [Source:UniProtKB/Swiss-Prot;Acc:O02115]
23. K08E7.3 let-99 6791 7.658 0.971 0.942 0.969 0.942 0.980 0.965 0.947 0.942
24. Y48G1A.5 xpo-2 11748 7.653 0.935 0.976 0.973 0.976 0.954 0.920 0.970 0.949 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_001293261]
25. ZC513.6 oma-2 33660 7.651 0.965 0.960 0.982 0.960 0.954 0.923 0.949 0.958
26. F21D5.2 otub-3 8469 7.65 0.923 0.967 0.977 0.967 0.910 0.985 0.989 0.932 OTUBain deubiquitylating protease homolog [Source:RefSeq peptide;Acc:NP_001255319]
27. F59B2.6 zif-1 10453 7.638 0.970 0.961 0.995 0.961 0.927 0.932 0.990 0.902 Zinc finger-interacting factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P34482]
28. R12C12.2 ran-5 14517 7.629 0.924 0.955 0.927 0.955 0.970 0.964 0.984 0.950 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
29. F53G12.5 mex-3 29076 7.626 0.943 0.958 0.987 0.958 0.922 0.940 0.983 0.935 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
30. EEED8.1 tofu-6 3962 7.625 0.945 0.959 0.936 0.959 0.952 0.965 0.962 0.947 Maternal effect lethal protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q09293]
31. Y17G7B.5 mcm-2 6246 7.625 0.959 0.931 0.953 0.931 0.946 0.961 0.985 0.959 DNA helicase [Source:RefSeq peptide;Acc:NP_001022416]
32. B0491.1 B0491.1 2131 7.624 0.927 0.954 0.926 0.954 0.965 0.957 0.968 0.973
33. F35G12.4 wdr-48 1592 7.622 0.983 0.961 0.963 0.961 0.916 0.946 0.933 0.959 WD repeat-containing protein 48 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q20059]
34. F30F8.3 gras-1 5902 7.621 0.947 0.921 0.987 0.921 0.976 0.972 0.922 0.975 GRASP (General Receptor for phosphoinositides 1-Associated Scaffold Protein) homolog [Source:RefSeq peptide;Acc:NP_492164]
35. T11F8.3 rme-2 9288 7.617 0.970 0.983 0.979 0.983 0.914 0.959 0.894 0.935 Receptor Mediated Endocytosis [Source:RefSeq peptide;Acc:NP_001293685]
36. K04G2.2 aho-3 15189 7.614 0.958 0.966 0.970 0.966 0.935 0.926 0.938 0.955
37. W03C9.7 mex-1 14285 7.613 0.962 0.986 0.993 0.986 0.897 0.873 0.966 0.950 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001254325]
38. R53.6 psf-1 4721 7.611 0.941 0.915 0.971 0.915 0.961 0.964 0.971 0.973 Probable DNA replication complex GINS protein PSF1 [Source:UniProtKB/Swiss-Prot;Acc:Q22019]
39. B0336.1 wrm-1 8284 7.61 0.967 0.955 0.969 0.955 0.941 0.943 0.944 0.936 Armadillo repeat-containing protein wrm-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10953]
40. B0240.4 npp-22 5510 7.608 0.954 0.952 0.979 0.952 0.921 0.935 0.953 0.962 Nucleoporin ndc-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4N3]
41. ZK507.6 cya-1 6807 7.607 0.979 0.952 0.942 0.952 0.938 0.972 0.929 0.943 G2/mitotic-specific cyclin-A1 [Source:UniProtKB/Swiss-Prot;Acc:P34638]
42. Y43E12A.1 cyb-2.1 12500 7.607 0.972 0.978 0.988 0.978 0.938 0.895 0.941 0.917 CYclin B [Source:RefSeq peptide;Acc:NP_502047]
43. C10H11.10 kca-1 13536 7.604 0.977 0.974 0.977 0.974 0.924 0.849 0.969 0.960 Kinesin Cargo Adaptor [Source:RefSeq peptide;Acc:NP_491443]
44. M03C11.4 hat-1 3839 7.604 0.944 0.955 0.977 0.955 0.912 0.952 0.961 0.948 Histone AcetylTransferase [Source:RefSeq peptide;Acc:NP_499296]
45. F10E9.8 sas-4 3703 7.601 0.960 0.936 0.947 0.936 0.938 0.960 0.966 0.958 Spindle assembly abnormal protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34402]
46. C27B7.1 spr-2 14958 7.596 0.961 0.923 0.951 0.923 0.957 0.964 0.949 0.968 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
47. T09A5.8 cec-3 5813 7.595 0.915 0.957 0.973 0.957 0.962 0.912 0.957 0.962 Chromo domain-containing protein cec-3 [Source:UniProtKB/Swiss-Prot;Acc:P45968]
48. F25B3.6 rtfo-1 11965 7.595 0.948 0.939 0.986 0.939 0.944 0.949 0.975 0.915 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
49. ZK632.1 mcm-6 9164 7.588 0.963 0.957 0.959 0.957 0.896 0.968 0.962 0.926 DNA replication licensing factor mcm-6 [Source:UniProtKB/Swiss-Prot;Acc:P34647]
50. R12E2.10 egg-5 9154 7.588 0.987 0.970 0.984 0.970 0.902 0.924 0.926 0.925 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_491316]
51. Y69A2AR.30 mdf-2 6403 7.586 0.900 0.975 0.964 0.975 0.918 0.913 0.963 0.978 MAD (yeast Mitosis arrest DeFicient) related [Source:RefSeq peptide;Acc:NP_001023563]
52. Y37D8A.9 mrg-1 14369 7.584 0.945 0.910 0.965 0.910 0.951 0.960 0.973 0.970 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
53. F37A4.9 bath-41 2558 7.581 0.969 0.956 0.968 0.956 0.871 0.958 0.933 0.970 BTB and MATH domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:P41886]
54. B0365.1 acly-2 3554 7.578 0.922 0.976 0.942 0.976 0.958 0.916 0.945 0.943 ATP-citrate synthase [Source:RefSeq peptide;Acc:NP_506267]
55. C10F3.1 cpg-4 1383 7.578 0.979 0.964 0.952 0.964 0.898 0.954 0.942 0.925 Chondroitin proteoglycan 4 [Source:UniProtKB/Swiss-Prot;Acc:O16883]
56. C37A2.4 cye-1 4158 7.577 0.962 0.915 0.938 0.915 0.967 0.963 0.931 0.986 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
57. T01C3.1 cdt-2 5193 7.575 0.935 0.978 0.988 0.978 0.894 0.913 0.930 0.959 CDT (S. pombe CDC10 Dependent Transcript) homolog [Source:RefSeq peptide;Acc:NP_506685]
58. F33H2.5 pole-1 3734 7.573 0.934 0.915 0.938 0.915 0.948 0.978 0.971 0.974 DNA polymerase [Source:RefSeq peptide;Acc:NP_493616]
59. T23G5.1 rnr-1 5022 7.572 0.969 0.959 0.965 0.959 0.969 0.887 0.977 0.887 Ribonucleoside-diphosphate reductase large subunit [Source:UniProtKB/Swiss-Prot;Acc:Q03604]
60. C10C5.6 daf-15 8724 7.565 0.954 0.961 0.956 0.961 0.954 0.950 0.931 0.898 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
61. F44B9.7 mdt-30 3651 7.563 0.917 0.958 0.930 0.958 0.958 0.959 0.955 0.928 Prion-like-(Q/N-rich) domain-bearing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:P34428]
62. F52C9.7 mog-3 9880 7.562 0.936 0.924 0.938 0.924 0.955 0.956 0.977 0.952 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
63. C38D4.6 pal-1 7627 7.561 0.985 0.927 0.973 0.927 0.922 0.908 0.968 0.951 Homeobox protein pal-1 [Source:UniProtKB/Swiss-Prot;Acc:P34766]
64. R10E4.4 mcm-5 3737 7.561 0.968 0.962 0.962 0.962 0.867 0.959 0.943 0.938 DNA replication licensing factor mcm-5 [Source:UniProtKB/Swiss-Prot;Acc:Q21902]
65. Y106G6H.15 ska-1 2362 7.56 0.925 0.945 0.953 0.945 0.968 0.960 0.951 0.913 Spindle and kinetochore-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWS0]
66. R08C7.10 wapl-1 4967 7.56 0.926 0.954 0.994 0.954 0.917 0.930 0.964 0.921 WAPL (Drosophila Wings APart-Like cohesin interactor) [Source:RefSeq peptide;Acc:NP_500567]
67. C02B10.5 C02B10.5 9171 7.559 0.934 0.917 0.954 0.917 0.978 0.933 0.965 0.961
68. Y113G7B.5 fog-2 2753 7.556 0.933 0.919 0.927 0.919 0.948 0.947 0.977 0.986 Feminization Of Germline [Source:RefSeq peptide;Acc:NP_001041187]
69. T26A5.7 set-1 6948 7.556 0.940 0.967 0.958 0.967 0.939 0.906 0.931 0.948 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
70. F22B7.6 polk-1 3397 7.555 0.928 0.954 0.973 0.954 0.970 0.904 0.892 0.980 DNA polymerase kappa [Source:UniProtKB/Swiss-Prot;Acc:P34409]
71. F38E1.7 mom-2 9569 7.554 0.927 0.944 0.987 0.944 0.933 0.943 0.944 0.932
72. F41H10.4 F41H10.4 3295 7.554 0.950 0.959 0.885 0.959 0.951 0.951 0.954 0.945
73. C56A3.6 C56A3.6 3709 7.552 0.819 0.972 0.925 0.972 0.963 0.970 0.976 0.955
74. C26E6.7 eri-9 8069 7.552 0.942 0.939 0.940 0.939 0.925 0.944 0.967 0.956 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
75. F43G9.9 cpn-1 14505 7.552 0.943 0.921 0.925 0.921 0.959 0.984 0.948 0.951 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
76. C32D5.5 set-4 7146 7.551 0.950 0.940 0.946 0.940 0.974 0.916 0.946 0.939 Histone-lysine N-methyltransferase Suv4-20 [Source:UniProtKB/Swiss-Prot;Acc:Q09265]
77. F56C9.6 F56C9.6 4303 7.551 0.956 0.902 0.945 0.902 0.953 0.983 0.943 0.967
78. ZK353.1 cyy-1 5745 7.549 0.959 0.916 0.949 0.916 0.951 0.961 0.953 0.944 Cyclin-Y [Source:UniProtKB/Swiss-Prot;Acc:P34624]
79. C08B11.3 swsn-7 11608 7.549 0.957 0.952 0.972 0.952 0.951 0.926 0.949 0.890 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
80. Y17G9B.3 cyp-31A3 1709 7.548 0.967 0.970 0.912 0.970 0.913 0.922 0.949 0.945 CYtochrome P450 family [Source:RefSeq peptide;Acc:NP_500637]
81. Y65B4BR.8 psf-3 1866 7.548 0.964 0.942 0.965 0.942 0.888 0.929 0.976 0.942 PSF (yeast Partner of Sld Five) conserved replication factor, GINS complex [Source:RefSeq peptide;Acc:NP_490748]
82. Y42G9A.6 wht-7 2348 7.547 0.953 0.975 0.965 0.975 0.944 0.950 0.883 0.902 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_001040881]
83. T09A5.10 lin-5 3600 7.546 0.979 0.935 0.946 0.935 0.965 0.937 0.965 0.884 Spindle apparatus protein lin-5 [Source:UniProtKB/Swiss-Prot;Acc:P45970]
84. B0273.2 puf-7 3256 7.546 0.966 0.958 0.966 0.958 0.935 0.933 0.938 0.892 Pumilio domain-containing protein 7 [Source:UniProtKB/Swiss-Prot;Acc:O44169]
85. T21E3.1 egg-4 7194 7.542 0.988 0.986 0.977 0.986 0.846 0.931 0.930 0.898 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_491269]
86. C18G1.5 hil-4 21692 7.541 0.950 0.945 0.963 0.945 0.946 0.919 0.951 0.922 Histone H1.4 [Source:UniProtKB/Swiss-Prot;Acc:O17536]
87. C48D1.2 ced-3 4123 7.539 0.930 0.941 0.924 0.941 0.928 0.953 0.976 0.946 Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P42573]
88. T24F1.2 samp-1 8422 7.538 0.987 0.973 0.973 0.973 0.895 0.882 0.897 0.958 Spindle Associated Membrane Protein homolog [Source:RefSeq peptide;Acc:NP_496416]
89. F38B7.5 duo-1 3087 7.537 0.905 0.966 0.902 0.966 0.928 0.966 0.951 0.953 Deubiquitylating with USP/UBP and OTU domains [Source:RefSeq peptide;Acc:NP_505931]
90. AH6.5 mex-6 19351 7.532 0.951 0.967 0.982 0.967 0.935 0.857 0.934 0.939 Zinc finger protein mex-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09436]
91. W01G7.5 lem-2 3709 7.531 0.865 0.950 0.921 0.950 0.962 0.982 0.942 0.959 LEM protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTB5]
92. F57B9.7 flap-1 5377 7.531 0.946 0.957 0.941 0.957 0.932 0.923 0.936 0.939 FLi1-Associated Protein homolog [Source:RefSeq peptide;Acc:NP_741207]
93. T23B5.1 prmt-3 10677 7.531 0.931 0.935 0.938 0.935 0.964 0.896 0.967 0.965 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_001040990]
94. Y54E5A.4 npp-4 6288 7.529 0.902 0.928 0.931 0.928 0.967 0.942 0.969 0.962 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
95. Y43F4B.4 npp-18 4780 7.529 0.925 0.953 0.950 0.953 0.910 0.930 0.972 0.936 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
96. F59A2.1 npp-9 34375 7.526 0.898 0.932 0.896 0.932 0.961 0.951 0.977 0.979 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
97. JC8.6 lin-54 5789 7.526 0.932 0.953 0.957 0.953 0.923 0.904 0.953 0.951
98. T05H4.14 gad-1 7979 7.526 0.913 0.928 0.966 0.928 0.947 0.972 0.955 0.917 Gastrulation defective protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O16519]
99. Y39A1A.1 epg-6 7677 7.525 0.960 0.980 0.989 0.980 0.948 0.893 0.934 0.841 Ectopic P Granules [Source:RefSeq peptide;Acc:NP_499335]
100. B0035.3 B0035.3 4118 7.523 0.945 0.913 0.923 0.913 0.972 0.930 0.968 0.959

There are 1908 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA