C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R11E3.8

Gene ID Gene Name Reads Transcripts Annotation
R11E3.8 dpf-5 8806 R11E3.8a.1, R11E3.8a.2, R11E3.8b.1, R11E3.8b.2 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_500647]

Genes with expression patterns similar to R11E3.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R11E3.8 dpf-5 8806 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_500647]
2. C06H2.6 lmtr-3 11122 7.634 0.960 0.975 0.941 0.975 0.977 0.969 0.908 0.929 Late endosomal/lysosomal adaptor, Mapk (MAPK) and mToR (MTOR) activator homolog [Source:RefSeq peptide;Acc:NP_741627]
3. R07G3.1 cdc-42 35737 7.596 0.930 0.976 0.966 0.976 0.948 0.961 0.901 0.938 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
4. R144.4 wip-1 14168 7.592 0.963 0.958 0.950 0.958 0.961 0.953 0.916 0.933 Wiskott-Aldrich syndrome protein (WASP)-Interacting Protein and gene assignment [Source:RefSeq peptide;Acc:NP_741123]
5. C15H11.4 dhs-22 21674 7.568 0.916 0.945 0.939 0.945 0.956 0.965 0.948 0.954 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
6. C53A5.3 hda-1 18413 7.557 0.951 0.973 0.937 0.973 0.950 0.949 0.886 0.938 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
7. R05D11.3 ran-4 15494 7.55 0.893 0.960 0.949 0.960 0.968 0.953 0.915 0.952 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
8. M01E5.4 M01E5.4 7638 7.544 0.961 0.951 0.942 0.951 0.935 0.939 0.967 0.898
9. H17B01.4 emc-1 9037 7.526 0.951 0.962 0.929 0.962 0.950 0.926 0.909 0.937 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
10. F08F8.3 kap-1 31437 7.526 0.872 0.955 0.968 0.955 0.956 0.962 0.909 0.949 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
11. Y113G7B.23 swsn-1 13766 7.514 0.922 0.968 0.946 0.968 0.949 0.937 0.902 0.922 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_001256906]
12. C39E9.14 dli-1 5650 7.508 0.901 0.944 0.958 0.944 0.962 0.959 0.885 0.955 Dynein Light Intermediate chain [Source:RefSeq peptide;Acc:NP_502518]
13. C18A3.5 tiar-1 25400 7.508 0.925 0.951 0.948 0.951 0.965 0.940 0.887 0.941 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
14. T26A5.9 dlc-1 59038 7.502 0.886 0.966 0.948 0.966 0.972 0.978 0.868 0.918 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
15. Y48A6B.13 spat-2 21773 7.5 0.907 0.936 0.950 0.936 0.953 0.977 0.903 0.938 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
16. ZK742.1 xpo-1 20741 7.499 0.947 0.954 0.974 0.954 0.954 0.883 0.920 0.913 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
17. ZK637.3 lnkn-1 16095 7.494 0.904 0.947 0.934 0.947 0.964 0.960 0.918 0.920 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
18. Y56A3A.20 ccf-1 18463 7.493 0.881 0.948 0.963 0.948 0.958 0.935 0.918 0.942 CCR4-NOT transcription complex subunit 7 [Source:UniProtKB/Swiss-Prot;Acc:Q17345]
19. D1022.1 ubc-6 9722 7.491 0.891 0.965 0.927 0.965 0.928 0.975 0.920 0.920 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
20. T24F1.1 raga-1 16171 7.484 0.903 0.958 0.949 0.958 0.961 0.947 0.873 0.935 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
21. T04A8.14 emb-5 11746 7.481 0.947 0.967 0.941 0.967 0.962 0.920 0.877 0.900 Suppressor of Ty 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34703]
22. M7.1 let-70 85699 7.476 0.899 0.965 0.933 0.965 0.938 0.954 0.903 0.919 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
23. K10C3.2 ensa-1 19836 7.476 0.926 0.966 0.934 0.966 0.942 0.915 0.910 0.917 ENdoSulfine Alpha [Source:RefSeq peptide;Acc:NP_492609]
24. K11D12.2 pqn-51 15951 7.475 0.892 0.977 0.951 0.977 0.947 0.932 0.881 0.918 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
25. F13H10.4 mogs-1 3777 7.472 0.940 0.956 0.927 0.956 0.968 0.956 0.847 0.922 Mannosyl-oligosaccharide glucosidase [Source:UniProtKB/Swiss-Prot;Acc:Q19426]
26. T12D8.6 mlc-5 19567 7.469 0.899 0.980 0.965 0.980 0.935 0.953 0.850 0.907 Myosin-2 essential light chain [Source:UniProtKB/Swiss-Prot;Acc:Q9XVI9]
27. Y102A5A.1 cand-1 11808 7.466 0.834 0.966 0.950 0.966 0.959 0.954 0.925 0.912 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
28. F43C1.2 mpk-1 13166 7.463 0.928 0.962 0.961 0.962 0.959 0.935 0.849 0.907 Mitogen-activated protein kinase mpk-1 [Source:UniProtKB/Swiss-Prot;Acc:P39745]
29. Y79H2A.6 arx-3 17398 7.463 0.909 0.959 0.935 0.959 0.975 0.978 0.835 0.913 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
30. B0285.1 cdk-12 5900 7.459 0.887 0.955 0.971 0.955 0.911 0.975 0.860 0.945 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
31. ZK1058.4 ccdc-47 8879 7.456 0.902 0.949 0.920 0.949 0.966 0.929 0.928 0.913 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
32. Y37D8A.1 arx-5 2599 7.455 0.935 0.973 0.936 0.973 0.948 0.939 0.905 0.846 Probable actin-related protein 2/3 complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV3]
33. C01G6.5 C01G6.5 10996 7.453 0.968 0.964 0.926 0.964 0.949 0.937 0.886 0.859
34. F59G1.3 vps-35 9577 7.452 0.947 0.963 0.973 0.963 0.962 0.961 0.807 0.876 Vacuolar protein sorting-associated protein 35 [Source:RefSeq peptide;Acc:NP_495180]
35. F13G3.4 dylt-1 21345 7.451 0.837 0.947 0.944 0.947 0.957 0.969 0.920 0.930 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
36. F26E4.11 hrdl-1 14721 7.449 0.965 0.973 0.915 0.973 0.953 0.924 0.837 0.909 E3 ubiquitin-protein ligase hrd-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P90859]
37. F54E7.3 par-3 8773 7.448 0.968 0.970 0.922 0.970 0.891 0.946 0.885 0.896 Partitioning defective protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q17353]
38. R07E5.11 R07E5.11 1170 7.447 0.923 0.923 0.943 0.923 0.948 0.972 0.888 0.927
39. F43G6.9 patr-1 23000 7.445 0.968 0.979 0.925 0.979 0.902 0.945 0.837 0.910 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
40. F41E6.9 vps-60 4469 7.445 0.904 0.963 0.969 0.963 0.925 0.929 0.846 0.946 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]
41. F33G12.5 golg-2 7434 7.443 0.952 0.953 0.928 0.953 0.942 0.970 0.867 0.878 GOLGi associated coiled-coil protein homolog [Source:RefSeq peptide;Acc:NP_494929]
42. ZC518.3 ccr-4 15531 7.443 0.964 0.966 0.905 0.966 0.938 0.914 0.908 0.882 CCR (yeast CCR4/NOT complex component) homolog [Source:RefSeq peptide;Acc:NP_001023607]
43. T12E12.4 drp-1 7694 7.44 0.929 0.964 0.969 0.964 0.949 0.919 0.868 0.878 Dynamin-Related Protein [Source:RefSeq peptide;Acc:NP_001023375]
44. T09B4.10 chn-1 5327 7.439 0.914 0.938 0.928 0.938 0.937 0.967 0.910 0.907 C-term of Hsp70-iNteracting protein (CHIP family) [Source:RefSeq peptide;Acc:NP_491781]
45. T19A6.3 nepr-1 6606 7.438 0.898 0.945 0.954 0.945 0.936 0.952 0.879 0.929 Nuclear envelope phosphatase-regulatory subunit 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXN3]
46. F54C8.5 rheb-1 6358 7.434 0.916 0.954 0.951 0.954 0.927 0.918 0.895 0.919 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
47. T05F1.1 nra-2 7101 7.434 0.923 0.960 0.935 0.960 0.900 0.923 0.922 0.911 Nicalin [Source:RefSeq peptide;Acc:NP_492553]
48. Y106G6A.5 dsbn-1 7130 7.433 0.938 0.955 0.938 0.955 0.912 0.959 0.903 0.873 Dysbindin protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XWQ1]
49. T19C3.8 fem-2 9225 7.431 0.943 0.972 0.960 0.972 0.927 0.902 0.854 0.901 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
50. K08E7.1 eak-7 18960 7.431 0.914 0.960 0.916 0.960 0.947 0.936 0.876 0.922 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
51. F45F2.11 F45F2.11 6741 7.431 0.944 0.923 0.950 0.923 0.975 0.924 0.861 0.931
52. ZK863.6 dpy-30 16177 7.43 0.889 0.959 0.950 0.959 0.936 0.932 0.878 0.927 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
53. F32A5.7 lsm-4 3785 7.429 0.915 0.970 0.951 0.970 0.948 0.889 0.885 0.901 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
54. C18D11.4 rsp-8 18308 7.428 0.889 0.937 0.909 0.937 0.960 0.905 0.939 0.952 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
55. F47D12.4 hmg-1.2 13779 7.426 0.907 0.966 0.940 0.966 0.959 0.962 0.821 0.905 High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]
56. ZK616.6 perm-3 16186 7.425 0.870 0.952 0.945 0.952 0.950 0.913 0.911 0.932 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
57. B0035.3 B0035.3 4118 7.424 0.957 0.941 0.968 0.941 0.931 0.907 0.871 0.908
58. E01A2.2 E01A2.2 12356 7.423 0.873 0.941 0.942 0.941 0.940 0.953 0.889 0.944 Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
59. F42A6.7 hrp-1 28201 7.422 0.897 0.951 0.950 0.951 0.964 0.867 0.924 0.918 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
60. D1014.3 snap-1 16776 7.422 0.962 0.969 0.949 0.969 0.924 0.938 0.818 0.893 SNAP (Soluble NSF Attachment Protein) homolog [Source:RefSeq peptide;Acc:NP_505099]
61. F38H4.9 let-92 25368 7.422 0.902 0.971 0.963 0.971 0.939 0.922 0.832 0.922 Serine/threonine-protein phosphatase [Source:RefSeq peptide;Acc:NP_502247]
62. K05C4.11 sol-2 16560 7.422 0.843 0.938 0.911 0.938 0.966 0.974 0.904 0.948 Suppressor Of Lurcher movement defect [Source:RefSeq peptide;Acc:NP_493560]
63. F23B12.6 fntb-1 4392 7.421 0.894 0.946 0.937 0.946 0.943 0.923 0.873 0.959 FarNesylTransferase, Beta subunit [Source:RefSeq peptide;Acc:NP_506580]
64. F28H1.3 aars-2 13537 7.417 0.897 0.942 0.945 0.942 0.951 0.923 0.899 0.918 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
65. ZK686.4 snu-23 9040 7.417 0.945 0.954 0.936 0.954 0.942 0.901 0.846 0.939 Putative zinc finger protein ZK686.4 [Source:RefSeq peptide;Acc:NP_498692]
66. F26H11.2 nurf-1 13015 7.415 0.938 0.953 0.946 0.953 0.950 0.933 0.905 0.837 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
67. R06A4.9 pfs-2 4733 7.414 0.857 0.982 0.965 0.982 0.930 0.891 0.892 0.915 Polyadenylation Factor Subunit homolog [Source:RefSeq peptide;Acc:NP_001293597]
68. Y111B2A.18 rsp-3 43731 7.413 0.912 0.948 0.938 0.948 0.966 0.878 0.899 0.924 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
69. H21P03.1 mbf-1 25586 7.411 0.800 0.926 0.938 0.926 0.973 0.965 0.933 0.950 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
70. ZK652.10 tag-307 3741 7.41 0.914 0.958 0.946 0.958 0.962 0.921 0.837 0.914
71. F13G3.10 F13G3.10 8898 7.41 0.956 0.925 0.918 0.925 0.941 0.969 0.842 0.934
72. Y37A1B.2 lst-4 11343 7.409 0.964 0.978 0.969 0.978 0.936 0.952 0.857 0.775 Sorting nexin lst-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4E2]
73. C30C11.4 hsp-110 27892 7.408 0.859 0.938 0.953 0.938 0.914 0.951 0.938 0.917 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_498868]
74. C25D7.8 otub-1 7941 7.407 0.866 0.947 0.942 0.947 0.953 0.918 0.900 0.934 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
75. C08B11.3 swsn-7 11608 7.407 0.966 0.969 0.917 0.969 0.922 0.895 0.864 0.905 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
76. F39B2.11 mtx-1 8526 7.407 0.897 0.949 0.963 0.949 0.923 0.920 0.897 0.909 Metaxin-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O45503]
77. C10C5.6 daf-15 8724 7.406 0.959 0.962 0.929 0.962 0.934 0.881 0.897 0.882 DAF-15; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q68TI8]
78. F38A5.1 odr-8 5283 7.405 0.906 0.955 0.930 0.955 0.934 0.966 0.878 0.881 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
79. ZK1128.8 vps-29 5118 7.405 0.911 0.965 0.949 0.965 0.881 0.963 0.831 0.940 Vacuolar protein sorting-associated protein 29 [Source:RefSeq peptide;Acc:NP_001022987]
80. F43E2.7 mtch-1 30689 7.404 0.856 0.950 0.955 0.950 0.966 0.920 0.879 0.928 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
81. C04A2.3 egl-27 15782 7.402 0.962 0.965 0.896 0.965 0.948 0.885 0.872 0.909 Egg-laying defective protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q09228]
82. K02F2.1 dpf-3 11465 7.401 0.959 0.967 0.946 0.967 0.946 0.876 0.883 0.857 Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
83. F55A11.3 sel-11 6513 7.4 0.938 0.975 0.955 0.975 0.945 0.940 0.861 0.811 E3 ubiquitin-protein ligase hrd-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20798]
84. F39H11.2 tlf-1 6231 7.399 0.932 0.964 0.936 0.964 0.957 0.881 0.876 0.889 TBP-Like Factor [Source:RefSeq peptide;Acc:NP_492356]
85. T19B4.2 npp-7 13073 7.399 0.903 0.973 0.960 0.973 0.952 0.861 0.855 0.922 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
86. F32H2.4 thoc-3 3861 7.398 0.936 0.964 0.970 0.964 0.930 0.876 0.859 0.899 THO Complex (transcription factor/nuclear export) subunit [Source:RefSeq peptide;Acc:NP_492416]
87. H21P03.3 sms-1 7737 7.396 0.967 0.962 0.938 0.962 0.937 0.974 0.874 0.782 Phosphatidylcholine:ceramide cholinephosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3D4]
88. K07D4.3 rpn-11 8834 7.395 0.952 0.959 0.926 0.959 0.918 0.948 0.813 0.920 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
89. Y24F12A.2 ragc-1 3950 7.394 0.935 0.958 0.943 0.958 0.926 0.885 0.873 0.916 RAs-related GTP binding protein C homolog [Source:RefSeq peptide;Acc:NP_001293887]
90. R74.5 asd-1 6481 7.394 0.975 0.964 0.923 0.964 0.909 0.951 0.848 0.860 RNA-binding protein ASD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEW7]
91. F25H2.6 F25H2.6 4807 7.394 0.912 0.951 0.944 0.951 0.960 0.912 0.894 0.870
92. B0035.2 dnj-2 3905 7.394 0.936 0.968 0.944 0.968 0.956 0.938 0.808 0.876 DnaJ homolog dnj-2 [Source:UniProtKB/Swiss-Prot;Acc:Q17433]
93. C27B7.1 spr-2 14958 7.393 0.954 0.954 0.952 0.954 0.950 0.852 0.875 0.902 Suppressor of presenilin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q18240]
94. C35D10.16 arx-6 8242 7.393 0.891 0.937 0.953 0.937 0.941 0.961 0.906 0.867 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
95. Y71F9AL.10 Y71F9AL.10 4976 7.392 0.841 0.952 0.948 0.952 0.971 0.978 0.892 0.858
96. Y71G12B.15 ubc-3 9409 7.391 0.929 0.972 0.922 0.972 0.952 0.920 0.860 0.864 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001293441]
97. R53.1 flad-1 3181 7.39 0.895 0.937 0.937 0.937 0.933 0.951 0.857 0.943 Probable FAD synthase Molybdenum cofactor biosynthesis protein-like region FAD synthase region [Source:UniProtKB/Swiss-Prot;Acc:Q22017]
98. Y59A8B.9 ebp-3 6183 7.389 0.925 0.961 0.891 0.961 0.949 0.929 0.875 0.898 microtubule End Binding Protein [Source:RefSeq peptide;Acc:NP_507528]
99. F35G12.3 sel-5 5924 7.389 0.950 0.959 0.959 0.959 0.953 0.918 0.827 0.864 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_001022562]
100. Y37E11AM.3 Y37E11AM.3 2883 7.386 0.961 0.933 0.896 0.933 0.934 0.976 0.862 0.891

There are 2018 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA