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Results for M88.2

Gene ID Gene Name Reads Transcripts Annotation
M88.2 mrps-34 2511 M88.2 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_497919]

Genes with expression patterns similar to M88.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. M88.2 mrps-34 2511 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_497919]
2. K11H3.6 mrpl-36 7328 7.609 0.957 0.936 0.937 0.936 0.985 0.968 0.980 0.910 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
3. C26B2.6 elpc-4 3600 7.583 0.950 0.925 0.929 0.925 0.969 0.969 0.970 0.946 Putative elongator complex protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q18195]
4. Y116A8C.42 snr-1 17062 7.568 0.938 0.924 0.922 0.924 0.982 0.954 0.965 0.959 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:Q17348]
5. R07E5.14 rnp-4 11659 7.568 0.917 0.944 0.914 0.944 0.971 0.978 0.940 0.960 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
6. T19B4.2 npp-7 13073 7.565 0.929 0.964 0.941 0.964 0.959 0.938 0.928 0.942 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
7. T01E8.6 mrps-14 9328 7.551 0.933 0.923 0.962 0.923 0.960 0.970 0.956 0.924 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
8. F43G9.5 cfim-1 9169 7.551 0.942 0.946 0.898 0.946 0.965 0.975 0.930 0.949 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
9. C01F6.8 icln-1 6586 7.549 0.934 0.941 0.931 0.941 0.973 0.968 0.919 0.942 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
10. H27M09.2 rpb-5 4744 7.544 0.941 0.942 0.934 0.942 0.969 0.973 0.947 0.896 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5K2]
11. F32A5.7 lsm-4 3785 7.543 0.897 0.938 0.900 0.938 0.966 0.980 0.963 0.961 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
12. PAR2.1 mtss-1 4055 7.538 0.961 0.945 0.927 0.945 0.967 0.940 0.944 0.909 Single-stranded DNA-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34496]
13. T22D1.5 T22D1.5 7756 7.536 0.883 0.939 0.905 0.939 0.977 0.978 0.964 0.951
14. F10G7.3 unc-85 5206 7.535 0.951 0.954 0.872 0.954 0.955 0.947 0.968 0.934 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
15. Y49A3A.5 cyn-1 6411 7.532 0.893 0.921 0.949 0.921 0.968 0.972 0.969 0.939 Peptidyl-prolyl cis-trans isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P52009]
16. D2023.5 mpst-1 10328 7.531 0.948 0.908 0.941 0.908 0.972 0.985 0.932 0.937 Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
17. Y54E5A.6 Y54E5A.6 770 7.524 0.899 0.923 0.925 0.923 0.981 0.970 0.970 0.933
18. K11D12.2 pqn-51 15951 7.524 0.948 0.939 0.919 0.939 0.959 0.943 0.917 0.960 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
19. B0205.9 B0205.9 3651 7.523 0.926 0.936 0.934 0.936 0.948 0.964 0.918 0.961
20. F53A2.4 nud-1 7818 7.522 0.962 0.917 0.906 0.917 0.970 0.973 0.942 0.935 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
21. F26F4.11 rpb-8 7601 7.522 0.918 0.925 0.902 0.925 0.974 0.976 0.969 0.933 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Source:UniProtKB/Swiss-Prot;Acc:Q19826]
22. F59A2.1 npp-9 34375 7.522 0.904 0.936 0.902 0.936 0.978 0.978 0.943 0.945 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_871701]
23. B0205.11 mrpl-9 9162 7.516 0.939 0.905 0.921 0.905 0.975 0.938 0.957 0.976 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
24. C08B6.9 aos-1 3892 7.516 0.922 0.948 0.907 0.948 0.949 0.978 0.955 0.909 SUMO-activating enzyme subunit aos-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17820]
25. F59E12.11 sam-4 8179 7.515 0.905 0.945 0.894 0.945 0.961 0.948 0.966 0.951
26. C08B11.5 sap-49 10553 7.514 0.901 0.946 0.941 0.946 0.958 0.965 0.933 0.924 Splicing factor 3B subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09442]
27. C02B10.5 C02B10.5 9171 7.514 0.923 0.937 0.898 0.937 0.954 0.965 0.957 0.943
28. Y18D10A.16 Y18D10A.16 2881 7.513 0.948 0.938 0.898 0.938 0.969 0.950 0.944 0.928
29. Y71F9B.4 snr-7 13542 7.512 0.934 0.915 0.913 0.915 0.977 0.967 0.945 0.946 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
30. F21C3.4 rde-2 6286 7.511 0.923 0.939 0.904 0.939 0.967 0.977 0.928 0.934
31. Y54E5A.4 npp-4 6288 7.511 0.957 0.932 0.902 0.932 0.973 0.927 0.927 0.961 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
32. W06E11.4 sbds-1 6701 7.508 0.928 0.923 0.903 0.923 0.963 0.962 0.980 0.926 Ribosome maturation protein SBDS [Source:UniProtKB/Swiss-Prot;Acc:Q23202]
33. Y46G5A.5 pisy-1 13040 7.507 0.928 0.948 0.836 0.948 0.951 0.973 0.966 0.957 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
34. Y62E10A.11 mdt-9 5971 7.504 0.949 0.931 0.885 0.931 0.956 0.982 0.952 0.918 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
35. C28A5.1 C28A5.1 1076 7.503 0.936 0.928 0.891 0.928 0.954 0.961 0.944 0.961
36. T28D9.10 snr-3 9995 7.503 0.930 0.904 0.929 0.904 0.977 0.972 0.934 0.953 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
37. Y53C12B.3 nos-3 20231 7.501 0.932 0.932 0.914 0.932 0.977 0.909 0.964 0.941 NanOS related [Source:RefSeq peptide;Acc:NP_496101]
38. F56F3.1 ifet-1 25772 7.498 0.943 0.919 0.925 0.919 0.962 0.963 0.930 0.937 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
39. F41H10.4 F41H10.4 3295 7.497 0.925 0.956 0.907 0.956 0.959 0.954 0.934 0.906
40. F32H2.1 snpc-4 7581 7.497 0.922 0.932 0.865 0.932 0.975 0.946 0.977 0.948 snRNA-activating protein complex subunit 4 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91868]
41. Y43F4B.4 npp-18 4780 7.496 0.940 0.946 0.864 0.946 0.960 0.970 0.952 0.918 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
42. F53F4.12 F53F4.12 2683 7.494 0.954 0.911 0.932 0.911 0.962 0.976 0.957 0.891
43. K04C2.3 K04C2.3 23540 7.492 0.895 0.927 0.903 0.927 0.985 0.944 0.965 0.946
44. K01G5.1 rnf-113 4336 7.492 0.919 0.912 0.941 0.912 0.969 0.921 0.971 0.947 RING finger protein 113 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17917]
45. T24F1.1 raga-1 16171 7.491 0.921 0.962 0.899 0.962 0.959 0.940 0.930 0.918 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
46. Y41D4B.19 npp-8 12992 7.49 0.891 0.930 0.906 0.930 0.977 0.964 0.960 0.932 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
47. C34D4.12 cyn-12 7363 7.489 0.926 0.927 0.913 0.927 0.980 0.958 0.945 0.913 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
48. B0303.15 mrpl-11 9889 7.489 0.937 0.911 0.907 0.911 0.962 0.976 0.961 0.924 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
49. B0024.13 B0024.13 4311 7.489 0.944 0.944 0.835 0.944 0.968 0.961 0.945 0.948 Polyprenol reductase [Source:UniProtKB/Swiss-Prot;Acc:Q17428]
50. Y39G10AR.7 ekl-7 7072 7.488 0.934 0.927 0.866 0.927 0.966 0.955 0.970 0.943
51. C34E10.2 gop-2 5684 7.485 0.921 0.908 0.899 0.908 0.981 0.975 0.971 0.922 GPN-loop GTPase 1 [Source:UniProtKB/Swiss-Prot;Acc:P46577]
52. R12C12.2 ran-5 14517 7.485 0.935 0.958 0.887 0.958 0.965 0.925 0.935 0.922 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
53. K07A1.12 lin-53 15817 7.484 0.859 0.945 0.874 0.945 0.971 0.990 0.952 0.948 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
54. T16G1.11 eif-3.K 14014 7.482 0.934 0.912 0.935 0.912 0.947 0.940 0.949 0.953 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
55. C48B6.3 C48B6.3 6610 7.481 0.927 0.951 0.904 0.951 0.963 0.978 0.901 0.906
56. T06A10.4 lsy-13 7631 7.478 0.931 0.937 0.916 0.937 0.951 0.970 0.939 0.897
57. F42A6.7 hrp-1 28201 7.478 0.908 0.941 0.932 0.941 0.952 0.914 0.955 0.935 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
58. F23F1.1 nfyc-1 9983 7.477 0.909 0.939 0.875 0.939 0.981 0.959 0.945 0.930 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
59. Y17G7A.1 hmg-12 29989 7.477 0.936 0.927 0.904 0.927 0.977 0.946 0.948 0.912 HMG [Source:RefSeq peptide;Acc:NP_496544]
60. Y37D8A.11 cec-7 8801 7.476 0.929 0.917 0.921 0.917 0.983 0.943 0.942 0.924 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_001022828]
61. F28H1.3 aars-2 13537 7.476 0.897 0.918 0.909 0.918 0.977 0.963 0.960 0.934 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
62. C08F8.1 pfd-1 10199 7.474 0.963 0.899 0.889 0.899 0.969 0.970 0.941 0.944 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
63. R09B3.1 exo-3 4401 7.474 0.942 0.934 0.896 0.934 0.957 0.930 0.957 0.924 EXOnuclease [Source:RefSeq peptide;Acc:NP_001021584]
64. F53F10.5 npp-11 3378 7.474 0.921 0.925 0.856 0.925 0.958 0.976 0.950 0.963 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491232]
65. C25D7.8 otub-1 7941 7.473 0.941 0.936 0.892 0.936 0.973 0.915 0.926 0.954 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
66. Y54G11A.3 Y54G11A.3 7161 7.471 0.919 0.950 0.920 0.950 0.963 0.934 0.938 0.897
67. Y46G5A.4 snrp-200 13827 7.47 0.924 0.932 0.916 0.932 0.967 0.927 0.934 0.938 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
68. F52C9.7 mog-3 9880 7.47 0.888 0.958 0.889 0.958 0.978 0.913 0.949 0.937 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
69. C26E6.4 rpb-2 7053 7.47 0.877 0.917 0.929 0.917 0.976 0.960 0.951 0.943 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
70. B0261.4 mrpl-47 8210 7.469 0.921 0.915 0.913 0.915 0.959 0.952 0.953 0.941 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
71. Y39G10AR.9 Y39G10AR.9 3972 7.468 0.930 0.967 0.914 0.967 0.918 0.934 0.902 0.936
72. W08E3.1 snr-2 14849 7.468 0.928 0.914 0.925 0.914 0.930 0.976 0.948 0.933 Probable small nuclear ribonucleoprotein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:P91918]
73. K01G5.4 ran-1 32379 7.468 0.909 0.944 0.875 0.944 0.958 0.945 0.953 0.940 GTP-binding nuclear protein ran-1 [Source:UniProtKB/Swiss-Prot;Acc:O17915]
74. K08E7.1 eak-7 18960 7.467 0.904 0.943 0.868 0.943 0.968 0.955 0.919 0.967 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
75. T19C3.8 fem-2 9225 7.466 0.917 0.935 0.902 0.935 0.969 0.962 0.928 0.918 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
76. M88.7 cisd-3.1 5713 7.465 0.924 0.899 0.925 0.899 0.957 0.949 0.972 0.940 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
77. B0035.3 B0035.3 4118 7.463 0.892 0.946 0.905 0.946 0.950 0.945 0.943 0.936
78. C37A2.4 cye-1 4158 7.462 0.845 0.961 0.898 0.961 0.968 0.962 0.933 0.934 G1/S-specific cyclin-E [Source:UniProtKB/Swiss-Prot;Acc:O01501]
79. R74.8 R74.8 7722 7.461 0.906 0.952 0.890 0.952 0.949 0.957 0.932 0.923
80. T23H2.1 npp-12 12425 7.461 0.904 0.914 0.882 0.914 0.968 0.969 0.945 0.965 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
81. C06A5.1 inst-1 5068 7.457 0.947 0.955 0.860 0.955 0.912 0.945 0.939 0.944 INtegrator complex SubuniT 1 homolog [Source:RefSeq peptide;Acc:NP_491739]
82. K03B4.2 K03B4.2 21796 7.456 0.952 0.954 0.898 0.954 0.901 0.943 0.916 0.938
83. Y37D8A.9 mrg-1 14369 7.456 0.883 0.926 0.881 0.926 0.984 0.970 0.940 0.946 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
84. B0464.7 baf-1 10161 7.455 0.930 0.914 0.851 0.914 0.967 0.942 0.965 0.972 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
85. T28D9.2 rsp-5 6460 7.455 0.911 0.918 0.879 0.918 0.975 0.966 0.962 0.926 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
86. R151.9 pfd-5 6951 7.454 0.956 0.914 0.894 0.914 0.954 0.946 0.943 0.933 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
87. T25G3.4 T25G3.4 9394 7.453 0.935 0.895 0.925 0.895 0.984 0.966 0.932 0.921 Probable glycerol-3-phosphate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P90795]
88. Y54E10BR.5 Y54E10BR.5 10734 7.453 0.867 0.919 0.930 0.919 0.971 0.977 0.906 0.964 Signal peptidase complex catalytic subunit SEC11 [Source:RefSeq peptide;Acc:NP_491092]
89. D2013.2 wdfy-2 7286 7.452 0.946 0.949 0.871 0.949 0.961 0.946 0.878 0.952 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
90. C48B4.11 C48B4.11 4384 7.449 0.929 0.940 0.845 0.940 0.967 0.935 0.975 0.918
91. ZK863.6 dpy-30 16177 7.449 0.880 0.929 0.926 0.929 0.961 0.924 0.948 0.952 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
92. Y40B1B.8 Y40B1B.8 4877 7.448 0.891 0.931 0.875 0.931 0.972 0.972 0.975 0.901
93. CC4.3 smu-1 4169 7.446 0.897 0.936 0.897 0.936 0.961 0.970 0.926 0.923 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
94. Y39G10AR.20 tbca-1 4155 7.446 0.918 0.918 0.920 0.918 0.985 0.890 0.926 0.971 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
95. R06A4.4 imb-2 10302 7.445 0.933 0.931 0.883 0.931 0.956 0.930 0.930 0.951 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
96. W06H3.3 ctps-1 8363 7.444 0.911 0.887 0.899 0.887 0.977 0.966 0.969 0.948 CTP synthase [Source:RefSeq peptide;Acc:NP_507243]
97. Y62E10A.12 lsm-3 4322 7.444 0.909 0.934 0.879 0.934 0.956 0.973 0.934 0.925 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_502579]
98. F55A12.5 F55A12.5 6612 7.443 0.950 0.948 0.916 0.948 0.937 0.971 0.887 0.886
99. K08F4.2 gtbp-1 25222 7.443 0.915 0.884 0.943 0.884 0.975 0.953 0.942 0.947 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
100. ZC410.2 mppb-1 3991 7.443 0.959 0.909 0.897 0.909 0.952 0.952 0.918 0.947 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA