C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for M04F3.3

Gene ID Gene Name Reads Transcripts Annotation
M04F3.3 M04F3.3 1260 M04F3.3

Genes with expression patterns similar to M04F3.3

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. M04F3.3 M04F3.3 1260 5 1.000 - 1.000 - 1.000 1.000 - 1.000
2. K01D12.7 K01D12.7 5794 4.498 0.893 - 0.875 - 0.945 0.960 - 0.825
3. Y48G8AL.6 smg-2 12561 4.461 0.887 - 0.804 - 0.938 0.961 - 0.871 Regulator of nonsense transcripts 1 [Source:UniProtKB/Swiss-Prot;Acc:O76512]
4. T27D1.1 cyn-9 2940 4.433 0.853 - 0.858 - 0.950 0.929 - 0.843 Peptidyl-prolyl cis-trans isomerase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q09637]
5. C08B11.7 ubh-4 3186 4.423 0.849 - 0.835 - 0.945 0.959 - 0.835 Probable ubiquitin carboxyl-terminal hydrolase ubh-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09444]
6. C41D11.2 eif-3.H 7520 4.422 0.862 - 0.796 - 0.957 0.928 - 0.879 Eukaryotic translation initiation factor 3 subunit H [Source:UniProtKB/Swiss-Prot;Acc:O01974]
7. C08B11.6 arp-6 4646 4.421 0.822 - 0.843 - 0.956 0.942 - 0.858 Actin-like protein C08B11.6 [Source:UniProtKB/Swiss-Prot;Acc:Q09443]
8. Y71F9B.16 dnj-30 4262 4.421 0.855 - 0.840 - 0.948 0.965 - 0.813 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001293377]
9. T17E9.2 nmt-1 8017 4.42 0.825 - 0.871 - 0.971 0.903 - 0.850 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
10. F20D12.1 csr-1 16351 4.412 0.854 - 0.827 - 0.921 0.960 - 0.850 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
11. C32E8.6 C32E8.6 0 4.409 0.839 - 0.829 - 0.963 0.959 - 0.819
12. M04F3.2 M04F3.2 835 4.402 0.853 - 0.810 - 0.950 0.966 - 0.823
13. C34C12.9 C34C12.9 542 4.401 0.817 - 0.823 - 0.961 0.962 - 0.838
14. C53D5.6 imb-3 28921 4.401 0.828 - 0.816 - 0.949 0.952 - 0.856 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
15. K08F11.3 cif-1 10218 4.397 0.835 - 0.874 - 0.954 0.917 - 0.817 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
16. Y102A5A.1 cand-1 11808 4.396 0.908 - 0.814 - 0.952 0.899 - 0.823 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
17. F09D1.1 usp-39 2037 4.392 0.759 - 0.842 - 0.956 0.934 - 0.901 Ubiquitin Specific Protease [Source:RefSeq peptide;Acc:NP_494298]
18. F42A10.6 F42A10.6 2006 4.392 0.829 - 0.845 - 0.973 0.948 - 0.797
19. Y39G10AR.9 Y39G10AR.9 3972 4.392 0.875 - 0.837 - 0.979 0.896 - 0.805
20. B0511.9 cdc-26 3023 4.391 0.860 - 0.803 - 0.962 0.895 - 0.871 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_740914]
21. C08C3.4 cyk-7 12075 4.385 0.843 - 0.836 - 0.928 0.952 - 0.826 Cytokinesis defective protein 7 [Source:UniProtKB/Swiss-Prot;Acc:P34325]
22. T09F3.4 T09F3.4 131 4.385 0.815 - 0.835 - 0.952 0.965 - 0.818
23. C50C3.6 prp-8 19582 4.381 0.837 - 0.859 - 0.971 0.912 - 0.802 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
24. ZK652.2 tomm-7 8594 4.38 0.808 - 0.784 - 0.957 0.939 - 0.892 Mitochondrial import receptor subunit TOM7 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34660]
25. F57B9.5 byn-1 58236 4.38 0.860 - 0.846 - 0.951 0.916 - 0.807 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
26. C32E8.11 ubr-1 10338 4.38 0.819 - 0.829 - 0.939 0.956 - 0.837 E3 ubiquitin-protein ligase ubr-1 [Source:UniProtKB/Swiss-Prot;Acc:P91133]
27. F10G8.3 rae-1 7542 4.377 0.856 - 0.826 - 0.944 0.951 - 0.800 mRNA export factor rae-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93454]
28. Y116A8C.35 uaf-2 13808 4.376 0.810 - 0.837 - 0.967 0.934 - 0.828 U2AF splicing factor [Source:RefSeq peptide;Acc:NP_503036]
29. Y73B6BL.27 Y73B6BL.27 1910 4.373 0.852 - 0.867 - 0.965 0.917 - 0.772
30. ZC410.7 lpl-1 5101 4.373 0.856 - 0.824 - 0.940 0.966 - 0.787 LiPoate Ligase [Source:RefSeq peptide;Acc:NP_501580]
31. W10D9.5 tomm-22 7396 4.371 0.803 - 0.830 - 0.960 0.914 - 0.864 Translocase of Outer Mitochondrial Membrane [Source:RefSeq peptide;Acc:NP_493741]
32. C36E8.4 C36E8.4 0 4.371 0.791 - 0.842 - 0.950 0.944 - 0.844
33. F26F4.10 rars-1 9971 4.371 0.841 - 0.854 - 0.956 0.935 - 0.785 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
34. K08D12.4 K08D12.4 151 4.37 0.802 - 0.861 - 0.943 0.962 - 0.802
35. ZC477.4 ZC477.4 0 4.367 0.845 - 0.798 - 0.957 0.952 - 0.815
36. K05C4.8 K05C4.8 0 4.366 0.826 - 0.882 - 0.931 0.954 - 0.773
37. JC8.13 tag-115 1798 4.364 0.812 - 0.858 - 0.957 0.834 - 0.903
38. F46A9.4 skr-2 16831 4.363 0.846 - 0.804 - 0.949 0.961 - 0.803 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_492512]
39. W09C5.7 W09C5.7 2359 4.363 0.838 - 0.844 - 0.954 0.941 - 0.786
40. T20G5.11 rde-4 3966 4.362 0.844 - 0.825 - 0.950 0.965 - 0.778 RNA interference promoting factor; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBF5]
41. Y40B1B.5 eif-3.J 15061 4.362 0.865 - 0.843 - 0.962 0.912 - 0.780 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
42. D2089.1 rsp-7 11057 4.361 0.830 - 0.840 - 0.954 0.949 - 0.788 Probable splicing factor, arginine/serine-rich 7 [Source:UniProtKB/Swiss-Prot;Acc:O01159]
43. F36A4.7 ama-1 13620 4.361 0.803 - 0.848 - 0.968 0.941 - 0.801 DNA-directed RNA polymerase II subunit RPB1 [Source:UniProtKB/Swiss-Prot;Acc:P16356]
44. T23D8.4 eif-3.C 15343 4.36 0.848 - 0.834 - 0.957 0.904 - 0.817 Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O02328]
45. F21C3.3 hint-1 7078 4.359 0.847 - 0.829 - 0.960 0.912 - 0.811 Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P53795]
46. ZK380.2 ZK380.2 0 4.359 0.822 - 0.778 - 0.954 0.932 - 0.873
47. F45H11.3 hpo-35 8299 4.357 0.887 - 0.817 - 0.916 0.963 - 0.774
48. F55F8.5 wdr-12 5052 4.357 0.843 - 0.773 - 0.913 0.981 - 0.847 Ribosome biogenesis protein WDR12 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91343]
49. C29F5.1 C29F5.1 3405 4.356 0.818 - 0.861 - 0.875 0.960 - 0.842
50. ZK616.6 perm-3 16186 4.356 0.834 - 0.843 - 0.966 0.915 - 0.798 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
51. F11A10.8 cpsf-4 2079 4.356 0.794 - 0.796 - 0.963 0.976 - 0.827 Cleavage and Polyadenylation Specificity Factor [Source:RefSeq peptide;Acc:NP_001023126]
52. T26A5.3 nduf-2.2 3133 4.355 0.863 - 0.867 - 0.928 0.957 - 0.740 NADH Ubiquinone oxidoreductase Fe-S protein [Source:RefSeq peptide;Acc:NP_498423]
53. C06E7.1 sams-3 26921 4.355 0.832 - 0.824 - 0.952 0.950 - 0.797 Probable S-adenosylmethionine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:P50305]
54. ZK973.4 ZK973.4 456 4.354 0.839 - 0.765 - 0.963 0.945 - 0.842
55. Y66H1A.3 mrpl-55 4581 4.354 0.839 - 0.813 - 0.972 0.941 - 0.789 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_499930]
56. ZK652.1 snr-5 5993 4.353 0.838 - 0.885 - 0.952 0.886 - 0.792 Probable small nuclear ribonucleoprotein F [Source:UniProtKB/Swiss-Prot;Acc:P34659]
57. F48C1.8 F48C1.8 690 4.352 0.817 - 0.875 - 0.971 0.925 - 0.764
58. Y39E4B.1 abce-1 4178 4.352 0.859 - 0.845 - 0.950 0.923 - 0.775 ABC transporter, class E [Source:RefSeq peptide;Acc:NP_499717]
59. C27D11.1 egl-45 28282 4.351 0.829 - 0.839 - 0.935 0.951 - 0.797 Eukaryotic translation initiation factor 3 subunit A [Source:UniProtKB/Swiss-Prot;Acc:P34339]
60. Y56A3A.1 ntl-3 10450 4.348 0.841 - 0.740 - 0.959 0.953 - 0.855 NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
61. T12D8.2 drr-2 16208 4.348 0.817 - 0.808 - 0.952 0.947 - 0.824 Dietary Restriction Response (WT but not eat-2 lifespan increased) [Source:RefSeq peptide;Acc:NP_499818]
62. C06G3.11 tin-9.1 7773 4.347 0.796 - 0.806 - 0.965 0.942 - 0.838 Mitochondrial import inner membrane translocase subunit Tim9 [Source:UniProtKB/Swiss-Prot;Acc:Q17754]
63. Y81G3A.3 gcn-2 5831 4.345 0.880 - 0.773 - 0.916 0.961 - 0.815 Eukaryotic translation initiation factor 2-alpha kinase gcn-2 [Source:UniProtKB/Swiss-Prot;Acc:D0Z5N4]
64. F58B6.3 par-2 3914 4.341 0.870 - 0.777 - 0.950 0.943 - 0.801
65. F15D4.3 rmo-1 18517 4.34 0.813 - 0.817 - 0.960 0.939 - 0.811
66. B0464.1 dars-1 12331 4.34 0.846 - 0.849 - 0.966 0.911 - 0.768 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
67. T08B2.11 T08B2.11 969 4.339 0.847 - 0.870 - 0.906 0.967 - 0.749
68. W05F2.7 W05F2.7 1179 4.338 0.835 - 0.803 - 0.952 0.962 - 0.786
69. C43H8.2 mafr-1 5790 4.335 0.821 - 0.830 - 0.958 0.879 - 0.847 Repressor of RNA polymerase III transcription MAF1 [Source:RefSeq peptide;Acc:NP_492777]
70. Y41E3.4 qars-1 4391 4.335 0.833 - 0.803 - 0.931 0.952 - 0.816 Probable glutamine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:O62431]
71. T05F1.6 hsr-9 13312 4.335 0.849 - 0.816 - 0.958 0.936 - 0.776
72. C35C5.3 C35C5.3 5037 4.335 0.818 - 0.774 - 0.932 0.963 - 0.848 Putative selT-like protein C35C5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3N5]
73. C08C3.2 bath-15 2092 4.333 0.879 - 0.695 - 0.962 0.942 - 0.855 BTB and MATH domain-containing protein 15 [Source:RefSeq peptide;Acc:NP_498694]
74. C34B2.7 sdha-2 3043 4.333 0.867 - 0.843 - 0.926 0.951 - 0.746 Succinate dehydrogenase [Source:RefSeq peptide;Acc:NP_492798]
75. D1044.1 D1044.1 286 4.328 0.825 - 0.790 - 0.902 0.966 - 0.845 Uncharacterized kinase-like protein D1044.1 [Source:UniProtKB/Swiss-Prot;Acc:P41949]
76. H19N07.1 erfa-3 19869 4.327 0.867 - 0.859 - 0.954 0.900 - 0.747 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
77. T06D8.6 cchl-1 26292 4.326 0.786 - 0.833 - 0.944 0.969 - 0.794 Probable cytochrome c-type heme lyase [Source:UniProtKB/Swiss-Prot;Acc:P53703]
78. B0035.5 gspd-1 4613 4.326 0.847 - 0.789 - 0.901 0.958 - 0.831 Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q27464]
79. T28D6.7 T28D6.7 1768 4.326 0.866 - 0.752 - 0.933 0.953 - 0.822
80. T10C6.4 srx-44 8454 4.326 0.843 - 0.788 - 0.966 0.915 - 0.814 Serpentine Receptor, class X [Source:RefSeq peptide;Acc:NP_507023]
81. C17E4.10 C17E4.10 7034 4.326 0.823 - 0.770 - 0.958 0.951 - 0.824
82. F38H4.7 tag-30 4315 4.325 0.802 - 0.828 - 0.954 0.941 - 0.800
83. F28D9.1 rsr-1 4282 4.325 0.819 - 0.774 - 0.950 0.966 - 0.816 SR protein related [Source:RefSeq peptide;Acc:NP_492875]
84. C07A9.5 C07A9.5 0 4.324 0.844 - 0.818 - 0.946 0.959 - 0.757 Uncharacterized calcium-binding protein C07A9.5 [Source:UniProtKB/Swiss-Prot;Acc:P34316]
85. F48E8.6 disl-2 8774 4.323 0.821 - 0.763 - 0.941 0.961 - 0.837 DIS3-like exonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09568]
86. C47D12.6 tars-1 23488 4.322 0.850 - 0.798 - 0.969 0.918 - 0.787 Threonine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:P52709]
87. B0001.7 B0001.7 1590 4.321 0.764 - 0.819 - 0.935 0.959 - 0.844
88. F44E2.9 F44E2.9 1289 4.32 0.825 - 0.823 - 0.956 0.903 - 0.813
89. M106.4 gmps-1 12232 4.319 0.818 - 0.870 - 0.965 0.926 - 0.740 Probable GMP synthase [glutamine-hydrolyzing] [Source:UniProtKB/Swiss-Prot;Acc:Q09580]
90. T27F2.1 skp-1 3532 4.319 0.788 - 0.830 - 0.953 0.908 - 0.840 mammalian SKIP (Ski interacting protein) homolog [Source:RefSeq peptide;Acc:NP_505950]
91. Y54E2A.11 eif-3.B 13795 4.319 0.870 - 0.814 - 0.924 0.962 - 0.749 Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6]
92. T05H4.6 erfa-1 12542 4.317 0.876 - 0.823 - 0.970 0.878 - 0.770 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
93. F18E2.3 scc-3 13464 4.317 0.832 - 0.784 - 0.940 0.978 - 0.783 Cohesin subunit scc-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19555]
94. F55C5.5 tsfm-1 9192 4.316 0.827 - 0.807 - 0.950 0.918 - 0.814 Elongation factor Ts, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q20819]
95. ZK858.1 gld-4 14162 4.314 0.848 - 0.821 - 0.963 0.940 - 0.742 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
96. T01G9.4 npp-2 5361 4.314 0.760 - 0.837 - 0.922 0.962 - 0.833 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_492256]
97. F58B3.4 F58B3.4 6356 4.314 0.813 - 0.825 - 0.923 0.960 - 0.793
98. C18G1.4 pgl-3 5291 4.312 0.882 - 0.810 - 0.961 0.885 - 0.774 PGL-3; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBV6]
99. F45H11.2 ned-8 13247 4.311 0.752 - 0.815 - 0.959 0.963 - 0.822 NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]
100. Y66D12A.22 tin-10 6041 4.309 0.850 - 0.774 - 0.952 0.936 - 0.797 Mitochondrial import inner membrane translocase subunit Tim10 [Source:UniProtKB/Swiss-Prot;Acc:Q9Y0V6]

There are 304 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA