C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F54C9.5

Gene ID Gene Name Reads Transcripts Annotation
F54C9.5 rpl-5 99313 F54C9.5 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]

Genes with expression patterns similar to F54C9.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54C9.5 rpl-5 99313 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
2. C06B8.8 rpl-38 109834 7.845 0.962 0.984 0.979 0.984 0.991 0.993 0.970 0.982 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
3. Y48B6A.2 rpl-43 104489 7.795 0.980 0.987 0.985 0.987 0.906 1.000 0.980 0.970 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
4. C23G10.3 rps-3 69779 7.734 0.983 0.986 0.978 0.986 0.925 0.910 0.991 0.975 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
5. F53A3.3 rps-22 81093 7.732 0.989 0.979 0.974 0.979 0.893 0.939 0.989 0.990 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
6. D1007.12 rpl-24.1 73724 7.721 0.991 0.962 0.993 0.962 0.902 0.932 0.991 0.988 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
7. T05F1.3 rps-19 88407 7.716 0.992 0.980 0.986 0.980 0.872 0.922 0.996 0.988 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
8. B0336.9 swp-1 52442 7.716 0.977 0.968 0.976 0.968 0.897 0.943 0.995 0.992 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
9. Y37E3.7 rla-1 55876 7.704 0.982 0.978 0.977 0.978 0.863 0.951 0.989 0.986 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
10. R11D1.8 rpl-28 62242 7.702 0.985 0.977 0.974 0.977 0.893 0.918 0.996 0.982 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
11. F52B5.6 rpl-25.2 100512 7.701 0.986 0.966 0.969 0.966 0.987 0.891 0.977 0.959 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
12. C32E8.2 rpl-13 70096 7.7 0.982 0.980 0.986 0.980 0.848 0.940 0.992 0.992 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
13. F56F3.5 rps-1 85503 7.698 0.984 0.982 0.979 0.982 0.862 0.928 0.988 0.993 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
14. F25H2.10 rla-0 79986 7.695 0.984 0.988 0.984 0.988 0.887 0.882 0.993 0.989 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
15. C09D4.5 rpl-19 56944 7.693 0.989 0.977 0.977 0.977 0.839 0.947 0.997 0.990 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
16. T05E11.1 rps-5 79298 7.689 0.989 0.965 0.982 0.965 0.843 0.959 0.995 0.991 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
17. Y43B11AR.4 rps-4 76546 7.686 0.978 0.976 0.962 0.976 0.879 0.939 0.989 0.987 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
18. F17C11.9 eef-1G 37911 7.685 0.979 0.972 0.976 0.972 0.860 0.961 0.988 0.977 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
19. JC8.3 rpl-12 52728 7.685 0.988 0.976 0.980 0.976 0.870 0.914 0.990 0.991 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
20. M01F1.2 rpl-16 99563 7.682 0.988 0.993 0.976 0.993 0.814 0.930 0.997 0.991 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
21. C53H9.1 rpl-27 59496 7.681 0.976 0.970 0.979 0.970 0.873 0.928 0.995 0.990 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
22. F53G12.10 rpl-7 78552 7.674 0.972 0.987 0.963 0.987 0.866 0.931 0.981 0.987 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
23. F37C12.9 rps-14 106692 7.662 0.967 0.972 0.956 0.972 0.826 0.993 0.986 0.990 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
24. K04D7.2 mspn-1 48187 7.662 0.982 0.972 0.974 0.972 0.847 0.933 0.992 0.990 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
25. R13A5.8 rpl-9 140064 7.66 0.974 0.982 0.977 0.982 0.846 0.923 0.989 0.987 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
26. Y57G11C.16 rps-18 76576 7.653 0.958 0.974 0.973 0.974 0.877 0.944 0.968 0.985 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
27. T24B8.1 rpl-32 67285 7.65 0.970 0.978 0.977 0.978 0.836 0.931 0.993 0.987 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
28. F25H2.11 tct-1 41796 7.65 0.975 0.969 0.979 0.969 0.860 0.940 0.979 0.979 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
29. Y24D9A.4 rpl-7A 176639 7.649 0.909 0.987 0.956 0.987 0.862 0.992 0.964 0.992 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
30. F37C12.4 rpl-36 126906 7.642 0.974 0.979 0.957 0.979 0.881 0.921 0.976 0.975 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
31. K04D7.1 rack-1 48949 7.642 0.984 0.963 0.978 0.963 0.833 0.941 0.989 0.991 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
32. Y41D4B.5 rps-28 46003 7.641 0.969 0.959 0.981 0.959 0.879 0.918 0.993 0.983 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
33. B0513.3 rpl-29 102432 7.636 0.958 0.962 0.968 0.962 0.909 0.903 0.983 0.991 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
34. F28D1.7 rps-23 93860 7.635 0.976 0.973 0.975 0.973 0.853 0.902 0.988 0.995 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
35. C16A3.9 rps-13 82192 7.633 0.985 0.976 0.965 0.976 0.878 0.877 0.989 0.987 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
36. ZK1010.1 ubq-2 87842 7.626 0.970 0.977 0.984 0.977 0.827 0.936 0.963 0.992 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
37. C56C10.8 icd-1 89788 7.625 0.974 0.961 0.984 0.961 0.854 0.948 0.982 0.961 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
38. T08B2.10 rps-17 38071 7.625 0.953 0.969 0.973 0.969 0.879 0.928 0.979 0.975 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
39. C27A2.2 rpl-22 63091 7.624 0.974 0.958 0.975 0.958 0.848 0.934 0.993 0.984 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
40. R151.3 rpl-6 89081 7.62 0.983 0.984 0.978 0.984 0.820 0.900 0.979 0.992 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
41. F37C12.11 rps-21 62646 7.62 0.974 0.961 0.966 0.961 0.865 0.929 0.983 0.981 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
42. ZK652.4 rpl-35 89991 7.617 0.988 0.983 0.972 0.983 0.801 0.911 0.991 0.988 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
43. C26F1.9 rpl-39 51628 7.616 0.936 0.956 0.971 0.956 0.884 0.951 0.988 0.974 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
44. C26F1.4 rps-30 77534 7.614 0.984 0.977 0.972 0.977 0.846 0.895 0.975 0.988 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
45. Y62E10A.1 rla-2 59665 7.612 0.966 0.965 0.973 0.965 0.861 0.902 0.991 0.989 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
46. B0393.1 rps-0 89081 7.607 0.989 0.982 0.952 0.982 0.837 0.891 0.988 0.986 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
47. W09C5.6 rpl-31 156225 7.605 0.901 0.987 0.966 0.987 0.886 0.914 0.976 0.988 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
48. F25H5.4 eef-2 34846 7.597 0.959 0.956 0.967 0.956 0.850 0.946 0.988 0.975 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
49. B0250.1 rpl-2 100592 7.592 0.971 0.984 0.980 0.984 0.811 0.882 0.988 0.992 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
50. K11H12.2 rpl-15 96281 7.589 0.975 0.974 0.986 0.974 0.821 0.901 0.974 0.984 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
51. ZC434.2 rps-7 142021 7.582 0.977 0.983 0.978 0.983 0.692 0.996 0.986 0.987 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
52. F28C6.7 rpl-26 113192 7.581 0.989 0.981 0.967 0.981 0.748 0.929 0.995 0.991 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
53. Y75B12B.2 cyn-7 98281 7.579 0.983 0.956 0.973 0.956 0.838 0.992 0.931 0.950 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
54. C09H10.2 rpl-41 94057 7.576 0.965 0.964 0.948 0.964 0.870 0.911 0.987 0.967 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
55. C54C6.1 rpl-37 24379 7.576 0.939 0.948 0.968 0.948 0.870 0.953 0.977 0.973 60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622]
56. F54H12.6 eef-1B.1 37095 7.576 0.947 0.953 0.983 0.953 0.860 0.898 0.991 0.991 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
57. Y37E3.9 phb-1 29211 7.573 0.954 0.948 0.970 0.948 0.908 0.915 0.958 0.972 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
58. K02B2.5 rps-25 118421 7.572 0.981 0.971 0.978 0.971 0.700 0.996 0.982 0.993 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
59. H06I04.4 ubl-1 57718 7.571 0.984 0.967 0.963 0.967 0.822 0.922 0.979 0.967 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
60. C14B9.7 rpl-21 118616 7.563 0.971 0.978 0.984 0.978 0.680 0.994 0.990 0.988 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
61. Y71A12B.1 rps-6 123721 7.562 0.986 0.988 0.971 0.988 0.658 0.998 0.986 0.987 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
62. T24H7.1 phb-2 28775 7.558 0.973 0.968 0.974 0.968 0.856 0.895 0.967 0.957 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
63. Y65B4BR.5 icd-2 58321 7.554 0.970 0.946 0.942 0.946 0.880 0.959 0.955 0.956 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
64. F42C5.8 rps-8 171967 7.553 0.958 0.985 0.971 0.985 0.768 0.914 0.992 0.980 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
65. F25H2.5 ndk-1 176025 7.549 0.951 0.969 0.954 0.969 0.915 0.912 0.917 0.962 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
66. Y18D10A.19 fkb-2 48128 7.547 0.975 0.937 0.959 0.937 0.858 0.957 0.976 0.948 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
67. Y39A1C.3 cey-4 50694 7.541 0.948 0.968 0.979 0.968 0.835 0.909 0.951 0.983 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
68. Y48G8AL.8 rpl-17 77686 7.538 0.976 0.984 0.971 0.984 0.745 0.913 0.985 0.980 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
69. Y71F9AL.13 rpl-1 143484 7.534 0.986 0.991 0.979 0.991 0.699 0.910 0.989 0.989 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
70. F36A2.6 rps-15 147653 7.529 0.939 0.977 0.968 0.977 0.701 0.996 0.992 0.979 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
71. C49H3.11 rps-2 152343 7.524 0.971 0.979 0.889 0.979 0.869 0.872 0.980 0.985 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
72. F13B10.2 rpl-3 171741 7.523 0.977 0.963 0.968 0.963 0.687 0.995 0.980 0.990 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
73. B0464.1 dars-1 12331 7.521 0.962 0.939 0.958 0.939 0.851 0.945 0.979 0.948 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
74. Y105E8A.16 rps-20 146067 7.52 0.983 0.986 0.988 0.986 0.748 0.867 0.969 0.993 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
75. D2013.7 eif-3.F 21004 7.519 0.944 0.942 0.950 0.942 0.874 0.918 0.965 0.984 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
76. B0412.4 rps-29 35461 7.519 0.956 0.944 0.960 0.944 0.852 0.900 0.981 0.982 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]
77. T27F7.3 eif-1 28176 7.516 0.954 0.947 0.970 0.947 0.854 0.907 0.961 0.976 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
78. Y22D7AL.5 hsp-60 42542 7.513 0.953 0.938 0.935 0.938 0.839 0.974 0.975 0.961 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
79. Y18D10A.25 fkb-8 8968 7.512 0.956 0.914 0.956 0.914 0.911 0.965 0.966 0.930 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
80. B0261.4 mrpl-47 8210 7.508 0.964 0.937 0.941 0.937 0.891 0.946 0.971 0.921 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
81. E04A4.7 cyc-2.1 233997 7.506 0.964 0.977 0.950 0.977 0.869 0.906 0.906 0.957 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
82. T08B2.9 fars-1 12650 7.505 0.930 0.930 0.919 0.930 0.934 0.904 0.988 0.970 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
83. F57B9.5 byn-1 58236 7.504 0.957 0.963 0.970 0.963 0.829 0.931 0.944 0.947 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
84. Y106G6H.3 rpl-30 54860 7.498 0.942 0.979 0.893 0.979 0.856 0.907 0.978 0.964 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492728]
85. D2096.8 nap-1 59459 7.496 0.980 0.962 0.973 0.962 0.883 0.910 0.923 0.903 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
86. T21C9.12 scpl-4 14723 7.496 0.958 0.945 0.975 0.945 0.870 0.913 0.944 0.946 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
87. H20J04.5 pfd-2 8082 7.491 0.954 0.933 0.968 0.933 0.901 0.914 0.958 0.930 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
88. F40F11.1 rps-11 152960 7.489 0.873 0.979 0.968 0.979 0.828 0.907 0.976 0.979 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
89. F26D10.3 hsp-1 98277 7.487 0.972 0.953 0.954 0.953 0.834 0.915 0.936 0.970 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
90. W10D9.5 tomm-22 7396 7.483 0.929 0.961 0.966 0.961 0.837 0.919 0.967 0.943 Translocase of Outer Mitochondrial Membrane [Source:RefSeq peptide;Acc:NP_493741]
91. F40F8.10 rps-9 105818 7.479 0.962 0.972 0.967 0.972 0.754 0.891 0.967 0.994 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
92. Y37E3.10 Y37E3.10 6492 7.477 0.979 0.908 0.981 0.908 0.840 0.892 0.979 0.990
93. K08F11.3 cif-1 10218 7.476 0.951 0.932 0.954 0.932 0.855 0.927 0.975 0.950 COP9/Signalosome and eIF3 complex-shared subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94261]
94. C03D6.8 rpl-24.2 5932 7.475 0.970 0.954 0.935 0.954 0.901 0.891 0.958 0.912 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
95. H21P03.1 mbf-1 25586 7.475 0.953 0.936 0.959 0.936 0.873 0.912 0.939 0.967 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
96. K07A12.7 mrps-15 6325 7.475 0.949 0.925 0.955 0.925 0.899 0.931 0.977 0.914 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
97. C42C1.14 rpl-34 146539 7.474 0.967 0.986 0.967 0.986 0.688 0.916 0.979 0.985 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
98. B0041.4 rpl-4 161951 7.472 0.963 0.984 0.974 0.984 0.685 0.918 0.977 0.987 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
99. Y40B1B.5 eif-3.J 15061 7.466 0.938 0.957 0.949 0.957 0.829 0.905 0.964 0.967 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
100. T03D8.2 mrps-12 8253 7.464 0.942 0.940 0.977 0.940 0.870 0.920 0.962 0.913 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_508023]

There are 552 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA