C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for M01F1.2

Gene ID Gene Name Reads Transcripts Annotation
M01F1.2 rpl-16 99563 M01F1.2.1, M01F1.2.2 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]

Genes with expression patterns similar to M01F1.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. M01F1.2 rpl-16 99563 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
2. R151.3 rpl-6 89081 7.91 0.987 0.985 0.990 0.985 0.991 0.996 0.984 0.992 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
3. F25H2.10 rla-0 79986 7.892 0.981 0.992 0.972 0.992 0.974 0.992 0.996 0.993 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
4. F28D1.7 rps-23 93860 7.881 0.981 0.984 0.973 0.984 0.988 0.991 0.990 0.990 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
5. R13A5.8 rpl-9 140064 7.876 0.983 0.985 0.981 0.985 0.959 0.995 0.992 0.996 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
6. C16A3.9 rps-13 82192 7.857 0.981 0.977 0.970 0.977 0.980 0.989 0.990 0.993 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
7. C32E8.2 rpl-13 70096 7.84 0.988 0.990 0.983 0.990 0.985 0.924 0.994 0.986 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
8. Y37E3.7 rla-1 55876 7.834 0.971 0.986 0.975 0.986 0.986 0.951 0.991 0.988 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
9. ZK652.4 rpl-35 89991 7.826 0.984 0.989 0.985 0.989 0.995 0.902 0.995 0.987 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
10. T05E11.1 rps-5 79298 7.825 0.994 0.971 0.982 0.971 0.989 0.938 0.995 0.985 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
11. F28C6.7 rpl-26 113192 7.821 0.992 0.985 0.984 0.985 0.886 0.999 0.996 0.994 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
12. H06I04.4 ubl-1 57718 7.818 0.987 0.979 0.973 0.979 0.979 0.964 0.984 0.973 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
13. JC8.3 rpl-12 52728 7.816 0.984 0.979 0.974 0.979 0.980 0.933 0.995 0.992 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
14. C23G10.3 rps-3 69779 7.814 0.970 0.989 0.972 0.989 0.969 0.955 0.992 0.978 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
15. C53H9.1 rpl-27 59496 7.813 0.977 0.980 0.985 0.980 0.988 0.916 0.998 0.989 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
16. C27A2.2 rpl-22 63091 7.811 0.973 0.971 0.977 0.971 0.993 0.939 0.994 0.993 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
17. F37C12.9 rps-14 106692 7.81 0.965 0.984 0.977 0.984 0.991 0.927 0.990 0.992 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
18. Y48B6A.2 rpl-43 104489 7.81 0.984 0.990 0.985 0.990 0.979 0.929 0.983 0.970 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
19. D1007.6 rps-10 142465 7.808 0.981 0.992 0.979 0.992 0.905 0.987 0.987 0.985 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
20. K04D7.1 rack-1 48949 7.804 0.981 0.974 0.966 0.974 0.990 0.930 0.994 0.995 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
21. C09D4.5 rpl-19 56944 7.802 0.983 0.984 0.969 0.984 0.976 0.916 0.998 0.992 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
22. C09H10.2 rpl-41 94057 7.802 0.961 0.967 0.974 0.967 0.979 0.996 0.991 0.967 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
23. R11D1.8 rpl-28 62242 7.797 0.977 0.990 0.975 0.990 0.978 0.909 0.997 0.981 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
24. T05F1.3 rps-19 88407 7.796 0.990 0.987 0.987 0.987 0.980 0.877 0.994 0.994 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
25. Y43B11AR.4 rps-4 76546 7.794 0.974 0.981 0.973 0.981 0.980 0.921 0.990 0.994 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
26. F56F3.5 rps-1 85503 7.791 0.990 0.987 0.981 0.987 0.983 0.881 0.990 0.992 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
27. F37C12.11 rps-21 62646 7.789 0.971 0.975 0.974 0.975 0.993 0.925 0.988 0.988 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
28. B0336.9 swp-1 52442 7.782 0.981 0.976 0.971 0.976 0.981 0.917 0.994 0.986 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
29. ZK1010.1 ubq-2 87842 7.777 0.975 0.985 0.973 0.985 0.983 0.919 0.972 0.985 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
30. F53G12.10 rpl-7 78552 7.771 0.980 0.990 0.943 0.990 0.985 0.914 0.984 0.985 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
31. F37C12.4 rpl-36 126906 7.771 0.966 0.984 0.962 0.984 0.921 0.993 0.981 0.980 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
32. B0513.3 rpl-29 102432 7.769 0.952 0.963 0.945 0.963 0.974 0.993 0.988 0.991 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
33. ZC434.2 rps-7 142021 7.767 0.984 0.991 0.975 0.991 0.917 0.930 0.986 0.993 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
34. Y45F10D.12 rpl-18 104658 7.763 0.985 0.978 0.975 0.978 0.873 0.992 0.987 0.995 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
35. D1007.12 rpl-24.1 73724 7.763 0.988 0.970 0.980 0.970 0.974 0.898 0.995 0.988 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
36. F17C11.9 eef-1G 37911 7.763 0.979 0.976 0.952 0.976 0.958 0.951 0.990 0.981 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
37. F53A3.3 rps-22 81093 7.76 0.986 0.981 0.969 0.981 0.969 0.888 0.991 0.995 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
38. Y48G8AL.8 rpl-17 77686 7.759 0.976 0.988 0.974 0.988 0.869 0.997 0.983 0.984 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
39. C14B9.7 rpl-21 118616 7.753 0.985 0.983 0.979 0.983 0.907 0.931 0.994 0.991 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
40. C26F1.4 rps-30 77534 7.753 0.983 0.985 0.975 0.985 0.985 0.877 0.974 0.989 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
41. K04D7.2 mspn-1 48187 7.748 0.983 0.977 0.951 0.977 0.990 0.885 0.992 0.993 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
42. B0393.1 rps-0 89081 7.748 0.981 0.991 0.976 0.991 0.988 0.840 0.989 0.992 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
43. C56C10.8 icd-1 89788 7.742 0.962 0.967 0.963 0.967 0.991 0.933 0.986 0.973 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
44. Y41D4B.5 rps-28 46003 7.74 0.961 0.963 0.977 0.963 0.985 0.911 0.993 0.987 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
45. Y71A12B.1 rps-6 123721 7.736 0.985 0.993 0.969 0.993 0.891 0.929 0.989 0.987 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
46. F25H5.4 eef-2 34846 7.734 0.963 0.959 0.969 0.959 0.977 0.947 0.987 0.973 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
47. F10E7.7 rpl-33 81733 7.726 0.952 0.981 0.961 0.981 0.887 0.991 0.993 0.980 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
48. C42C1.14 rpl-34 146539 7.724 0.971 0.988 0.981 0.988 0.961 0.879 0.982 0.974 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
49. K02B2.5 rps-25 118421 7.723 0.980 0.977 0.971 0.977 0.907 0.933 0.985 0.993 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
50. Y71F9AL.13 rpl-1 143484 7.718 0.986 0.990 0.976 0.990 0.932 0.866 0.991 0.987 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
51. Y37E3.10 Y37E3.10 6492 7.718 0.983 0.898 0.979 0.898 0.994 0.992 0.980 0.994
52. F13B10.2 rpl-3 171741 7.717 0.979 0.972 0.985 0.972 0.899 0.933 0.985 0.992 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
53. F36A2.6 rps-15 147653 7.691 0.940 0.983 0.974 0.983 0.913 0.931 0.990 0.977 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
54. F54H12.6 eef-1B.1 37095 7.691 0.947 0.966 0.974 0.966 0.972 0.885 0.990 0.991 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
55. C26F1.9 rpl-39 51628 7.688 0.924 0.959 0.960 0.959 0.963 0.962 0.987 0.974 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
56. F39B2.6 rps-26 137659 7.683 0.976 0.987 0.985 0.987 0.947 0.844 0.977 0.980 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
57. F54C9.5 rpl-5 99313 7.682 0.988 0.993 0.976 0.993 0.814 0.930 0.997 0.991 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
58. T08B2.10 rps-17 38071 7.679 0.954 0.965 0.954 0.965 0.976 0.908 0.976 0.981 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
59. F25H2.11 tct-1 41796 7.677 0.964 0.970 0.963 0.970 0.978 0.873 0.980 0.979 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
60. F42C5.8 rps-8 171967 7.673 0.964 0.986 0.978 0.986 0.927 0.866 0.990 0.976 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
61. B0041.4 rpl-4 161951 7.673 0.974 0.976 0.983 0.976 0.921 0.875 0.978 0.990 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
62. F52B5.6 rpl-25.2 100512 7.671 0.980 0.970 0.960 0.970 0.853 0.986 0.983 0.969 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
63. F40F8.10 rps-9 105818 7.668 0.966 0.980 0.975 0.980 0.914 0.887 0.974 0.992 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
64. Y105E8A.16 rps-20 146067 7.665 0.987 0.988 0.988 0.988 0.902 0.847 0.973 0.992 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
65. Y57G11C.16 rps-18 76576 7.663 0.971 0.978 0.963 0.978 0.976 0.846 0.965 0.986 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
66. Y24D9A.4 rpl-7A 176639 7.659 0.891 0.993 0.975 0.993 0.910 0.933 0.968 0.996 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
67. Y62E10A.1 rla-2 59665 7.65 0.969 0.970 0.958 0.970 0.978 0.832 0.992 0.981 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
68. B0412.4 rps-29 35461 7.645 0.943 0.952 0.962 0.952 0.978 0.891 0.985 0.982 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]
69. Y106G6H.3 rpl-30 54860 7.64 0.931 0.980 0.936 0.980 0.980 0.885 0.978 0.970 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492728]
70. T24B8.1 rpl-32 67285 7.639 0.973 0.985 0.981 0.985 0.988 0.746 0.991 0.990 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
71. Y39A1C.3 cey-4 50694 7.632 0.947 0.967 0.961 0.967 0.954 0.888 0.955 0.993 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
72. Y18D10A.19 fkb-2 48128 7.63 0.972 0.938 0.913 0.938 0.968 0.965 0.979 0.957 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
73. C54C6.1 rpl-37 24379 7.625 0.930 0.954 0.967 0.954 0.970 0.889 0.979 0.982 60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622]
74. W09C5.6 rpl-31 156225 7.623 0.899 0.986 0.983 0.986 0.931 0.868 0.981 0.989 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
75. Y106G6H.2 pab-1 96744 7.615 0.983 0.969 0.953 0.969 0.867 0.915 0.973 0.986 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
76. T07A9.9 nog-1 19728 7.589 0.936 0.954 0.925 0.954 0.970 0.943 0.972 0.935 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
77. C49H3.11 rps-2 152343 7.587 0.987 0.981 0.858 0.981 0.970 0.841 0.985 0.984 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
78. Y65B4BR.5 icd-2 58321 7.586 0.963 0.958 0.905 0.958 0.963 0.914 0.966 0.959 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
79. C06B8.8 rpl-38 109834 7.583 0.967 0.986 0.981 0.986 0.783 0.932 0.972 0.976 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
80. B0250.1 rpl-2 100592 7.578 0.985 0.988 0.973 0.988 0.996 0.670 0.989 0.989 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
81. E04A4.7 cyc-2.1 233997 7.565 0.972 0.971 0.971 0.971 0.969 0.858 0.905 0.948 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
82. Y75B12B.2 cyn-7 98281 7.563 0.969 0.956 0.953 0.956 0.945 0.917 0.928 0.939 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
83. B0464.1 dars-1 12331 7.562 0.958 0.932 0.926 0.932 0.951 0.934 0.983 0.946 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
84. T05G5.10 iff-1 42569 7.556 0.943 0.957 0.933 0.957 0.957 0.939 0.978 0.892 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
85. K11H12.2 rpl-15 96281 7.555 0.984 0.980 0.976 0.980 0.977 0.692 0.976 0.990 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
86. T27F7.3 eif-1 28176 7.549 0.944 0.945 0.931 0.945 0.951 0.894 0.964 0.975 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
87. T24H7.1 phb-2 28775 7.547 0.976 0.962 0.935 0.962 0.975 0.810 0.966 0.961 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
88. Y22D7AL.5 hsp-60 42542 7.542 0.952 0.928 0.909 0.928 0.988 0.917 0.974 0.946 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
89. D2096.8 nap-1 59459 7.54 0.968 0.971 0.942 0.971 0.946 0.931 0.919 0.892 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
90. C03D6.8 rpl-24.2 5932 7.539 0.976 0.965 0.929 0.965 0.948 0.881 0.960 0.915 Probable ribosome biogenesis protein RLP24 [Source:UniProtKB/Swiss-Prot;Acc:Q17606]
91. F26D10.3 hsp-1 98277 7.539 0.968 0.955 0.924 0.955 0.929 0.892 0.941 0.975 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
92. T21C9.12 scpl-4 14723 7.525 0.957 0.948 0.937 0.948 0.960 0.877 0.953 0.945 Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
93. W10D9.5 tomm-22 7396 7.524 0.927 0.960 0.956 0.960 0.970 0.847 0.974 0.930 Translocase of Outer Mitochondrial Membrane [Source:RefSeq peptide;Acc:NP_493741]
94. F40F11.1 rps-11 152960 7.522 0.872 0.986 0.984 0.986 0.990 0.748 0.979 0.977 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
95. C37A2.8 C37A2.8 3887 7.515 0.990 0.849 0.972 0.849 0.986 0.916 0.968 0.985
96. F57B9.5 byn-1 58236 7.515 0.960 0.958 0.939 0.958 0.951 0.859 0.951 0.939 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
97. Y40B1B.5 eif-3.J 15061 7.514 0.931 0.954 0.898 0.954 0.971 0.863 0.971 0.972 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
98. C53D5.6 imb-3 28921 7.5 0.943 0.952 0.907 0.952 0.960 0.920 0.979 0.887 IMportin Beta family [Source:RefSeq peptide;Acc:NP_490715]
99. D2013.7 eif-3.F 21004 7.495 0.947 0.944 0.900 0.944 0.956 0.857 0.964 0.983 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
100. R144.7 larp-1 24669 7.488 0.967 0.942 0.842 0.942 0.984 0.914 0.951 0.946 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]

There are 795 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA