C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for C06B8.8

Gene ID Gene Name Reads Transcripts Annotation
C06B8.8 rpl-38 109834 C06B8.8.1, C06B8.8.2, C06B8.8.3, C06B8.8.4, C06B8.8.5, C06B8.8.6 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]

Genes with expression patterns similar to C06B8.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C06B8.8 rpl-38 109834 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
2. F54C9.5 rpl-5 99313 7.845 0.962 0.984 0.979 0.984 0.991 0.993 0.970 0.982 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
3. Y48B6A.2 rpl-43 104489 7.747 0.981 0.984 0.985 0.984 0.876 0.992 0.989 0.956 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
4. B0336.9 swp-1 52442 7.683 0.976 0.967 0.966 0.967 0.874 0.969 0.980 0.984 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
5. F53A3.3 rps-22 81093 7.682 0.966 0.975 0.979 0.975 0.877 0.965 0.978 0.967 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
6. D1007.12 rpl-24.1 73724 7.68 0.963 0.958 0.987 0.958 0.888 0.960 0.977 0.989 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
7. T05F1.3 rps-19 88407 7.673 0.976 0.974 0.985 0.974 0.848 0.954 0.977 0.985 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
8. F56F3.5 rps-1 85503 7.672 0.978 0.976 0.985 0.976 0.833 0.958 0.979 0.987 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
9. C53H9.1 rpl-27 59496 7.672 0.975 0.969 0.987 0.969 0.850 0.959 0.981 0.982 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
10. F53G12.10 rpl-7 78552 7.671 0.973 0.980 0.975 0.980 0.845 0.959 0.977 0.982 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
11. C32E8.2 rpl-13 70096 7.671 0.969 0.977 0.986 0.977 0.832 0.968 0.985 0.977 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
12. C23G10.3 rps-3 69779 7.67 0.954 0.985 0.976 0.985 0.903 0.938 0.974 0.955 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
13. Y43B11AR.4 rps-4 76546 7.656 0.959 0.979 0.974 0.979 0.862 0.964 0.957 0.982 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
14. JC8.3 rpl-12 52728 7.644 0.964 0.973 0.980 0.973 0.853 0.944 0.978 0.979 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
15. F37C12.9 rps-14 106692 7.641 0.973 0.974 0.968 0.974 0.800 0.991 0.980 0.981 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
16. F37C12.11 rps-21 62646 7.639 0.962 0.973 0.981 0.973 0.839 0.958 0.986 0.967 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
17. ZK1010.1 ubq-2 87842 7.637 0.985 0.977 0.982 0.977 0.799 0.963 0.975 0.979 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
18. Y57G11C.16 rps-18 76576 7.637 0.952 0.966 0.980 0.966 0.864 0.963 0.960 0.986 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
19. B0513.3 rpl-29 102432 7.636 0.976 0.967 0.963 0.967 0.893 0.912 0.977 0.981 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
20. F28D1.7 rps-23 93860 7.636 0.986 0.978 0.987 0.978 0.823 0.912 0.984 0.988 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
21. R11D1.8 rpl-28 62242 7.635 0.959 0.973 0.979 0.973 0.872 0.948 0.966 0.965 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
22. F37C12.4 rpl-36 126906 7.635 0.981 0.978 0.975 0.978 0.843 0.930 0.978 0.972 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
23. Y37E3.7 rla-1 55876 7.631 0.958 0.975 0.972 0.975 0.839 0.967 0.969 0.976 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
24. Y41D4B.5 rps-28 46003 7.63 0.975 0.971 0.980 0.971 0.856 0.948 0.953 0.976 40S ribosomal protein S28 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y04]
25. F17C11.9 eef-1G 37911 7.627 0.954 0.966 0.970 0.966 0.836 0.979 0.984 0.972 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
26. C09D4.5 rpl-19 56944 7.624 0.963 0.970 0.967 0.970 0.819 0.972 0.978 0.985 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
27. T05E11.1 rps-5 79298 7.624 0.966 0.963 0.986 0.963 0.813 0.980 0.979 0.974 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
28. C26F1.9 rpl-39 51628 7.62 0.939 0.961 0.964 0.961 0.877 0.971 0.976 0.971 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
29. F52B5.6 rpl-25.2 100512 7.619 0.956 0.967 0.964 0.967 0.976 0.890 0.972 0.927 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
30. Y62E10A.1 rla-2 59665 7.616 0.971 0.962 0.968 0.962 0.844 0.931 0.982 0.996 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
31. C26F1.4 rps-30 77534 7.61 0.973 0.972 0.968 0.972 0.829 0.934 0.978 0.984 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
32. C27A2.2 rpl-22 63091 7.605 0.967 0.961 0.989 0.961 0.817 0.960 0.968 0.982 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
33. R13A5.8 rpl-9 140064 7.603 0.965 0.980 0.980 0.980 0.807 0.932 0.990 0.969 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
34. R151.3 rpl-6 89081 7.597 0.979 0.981 0.986 0.981 0.787 0.903 0.991 0.989 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
35. F25H2.10 rla-0 79986 7.59 0.961 0.980 0.976 0.980 0.875 0.885 0.964 0.969 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
36. K04D7.2 mspn-1 48187 7.589 0.959 0.971 0.965 0.971 0.819 0.961 0.972 0.971 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
37. K04D7.1 rack-1 48949 7.587 0.953 0.966 0.964 0.966 0.811 0.968 0.981 0.978 Guanine nucleotide-binding protein subunit beta-2-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21215]
38. T08B2.10 rps-17 38071 7.587 0.938 0.966 0.966 0.966 0.861 0.955 0.956 0.979 40S ribosomal protein S17 [Source:UniProtKB/Swiss-Prot;Acc:O01692]
39. B0393.1 rps-0 89081 7.585 0.969 0.983 0.969 0.983 0.811 0.924 0.973 0.973 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
40. C16A3.9 rps-13 82192 7.583 0.972 0.972 0.974 0.972 0.865 0.876 0.970 0.982 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
41. M01F1.2 rpl-16 99563 7.583 0.967 0.986 0.981 0.986 0.783 0.932 0.972 0.976 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
42. ZK652.4 rpl-35 89991 7.582 0.977 0.976 0.980 0.976 0.773 0.942 0.982 0.976 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
43. T24B8.1 rpl-32 67285 7.576 0.966 0.973 0.978 0.973 0.813 0.932 0.967 0.974 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
44. F25H2.11 tct-1 41796 7.575 0.964 0.959 0.983 0.959 0.834 0.965 0.929 0.982 Translationally-controlled tumor protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93573]
45. C09H10.2 rpl-41 94057 7.575 0.964 0.958 0.967 0.958 0.852 0.913 0.979 0.984 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
46. Y24D9A.4 rpl-7A 176639 7.568 0.871 0.980 0.957 0.980 0.847 0.995 0.965 0.973 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
47. W09C5.6 rpl-31 156225 7.565 0.869 0.980 0.981 0.980 0.847 0.946 0.984 0.978 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
48. F42C5.8 rps-8 171967 7.557 0.960 0.980 0.958 0.980 0.774 0.943 0.979 0.983 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
49. K11H12.2 rpl-15 96281 7.555 0.963 0.978 0.987 0.978 0.801 0.902 0.970 0.976 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
50. B0250.1 rpl-2 100592 7.526 0.965 0.977 0.988 0.977 0.776 0.888 0.984 0.971 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
51. E04A4.7 cyc-2.1 233997 7.524 0.974 0.966 0.959 0.966 0.837 0.937 0.907 0.978 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
52. H06I04.4 ubl-1 57718 7.52 0.955 0.965 0.967 0.965 0.802 0.944 0.967 0.955 Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a [Source:UniProtKB/Swiss-Prot;Acc:P37165]
53. Y105E8A.16 rps-20 146067 7.518 0.985 0.977 0.987 0.977 0.698 0.913 0.991 0.990 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
54. C14B9.7 rpl-21 118616 7.513 0.963 0.977 0.981 0.977 0.658 0.999 0.985 0.973 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
55. K02B2.5 rps-25 118421 7.511 0.984 0.967 0.981 0.967 0.653 0.998 0.975 0.986 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
56. C49H3.11 rps-2 152343 7.511 0.971 0.968 0.919 0.968 0.830 0.907 0.989 0.959 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
57. F25H5.4 eef-2 34846 7.51 0.937 0.951 0.974 0.951 0.819 0.965 0.961 0.952 Elongation factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P29691]
58. Y106G6H.3 rpl-30 54860 7.509 0.926 0.974 0.918 0.974 0.839 0.938 0.968 0.972 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492728]
59. C42C1.14 rpl-34 146539 7.505 0.983 0.989 0.989 0.989 0.643 0.933 0.994 0.985 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
60. F25H2.5 ndk-1 176025 7.505 0.940 0.959 0.962 0.959 0.882 0.922 0.906 0.975 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
61. C54C6.1 rpl-37 24379 7.504 0.920 0.946 0.956 0.946 0.849 0.972 0.947 0.968 60S ribosomal protein L37 [Source:UniProtKB/Swiss-Prot;Acc:P49622]
62. B0412.4 rps-29 35461 7.491 0.937 0.949 0.959 0.949 0.830 0.930 0.966 0.971 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497263]
63. F28C6.7 rpl-26 113192 7.489 0.974 0.973 0.981 0.973 0.690 0.934 0.977 0.987 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
64. F54H12.6 eef-1B.1 37095 7.487 0.917 0.941 0.969 0.941 0.839 0.936 0.965 0.979 Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]
65. Y71A12B.1 rps-6 123721 7.486 0.960 0.985 0.990 0.985 0.635 0.991 0.970 0.970 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
66. ZC434.2 rps-7 142021 7.485 0.966 0.975 0.969 0.975 0.636 0.996 0.990 0.978 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
67. F40F8.10 rps-9 105818 7.485 0.979 0.971 0.983 0.971 0.697 0.927 0.979 0.978 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
68. F36A2.6 rps-15 147653 7.478 0.964 0.980 0.968 0.980 0.662 0.995 0.958 0.971 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
69. F40F11.1 rps-11 152960 7.476 0.841 0.975 0.972 0.975 0.812 0.926 0.988 0.987 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
70. Y71F9AL.13 rpl-1 143484 7.473 0.979 0.983 0.982 0.983 0.643 0.944 0.981 0.978 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
71. Y39A1C.3 cey-4 50694 7.473 0.919 0.955 0.960 0.955 0.812 0.942 0.964 0.966 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_499393]
72. F13B10.2 rpl-3 171741 7.472 0.965 0.963 0.983 0.963 0.634 0.996 0.984 0.984 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
73. C56C10.8 icd-1 89788 7.464 0.929 0.944 0.967 0.944 0.822 0.965 0.958 0.935 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
74. F39B2.6 rps-26 137659 7.442 0.968 0.981 0.982 0.981 0.654 0.909 0.989 0.978 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
75. Y37E3.9 phb-1 29211 7.441 0.917 0.940 0.942 0.940 0.877 0.936 0.937 0.952 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
76. D1007.6 rps-10 142465 7.441 0.971 0.973 0.966 0.973 0.649 0.932 0.989 0.988 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
77. Y37E3.10 Y37E3.10 6492 7.439 0.986 0.909 0.984 0.909 0.804 0.889 0.977 0.981
78. F26D10.3 hsp-1 98277 7.435 0.936 0.941 0.933 0.941 0.835 0.944 0.958 0.947 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
79. B0041.4 rpl-4 161951 7.433 0.958 0.978 0.985 0.978 0.662 0.931 0.964 0.977 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
80. T27F7.3 eif-1 28176 7.433 0.912 0.937 0.938 0.937 0.838 0.942 0.963 0.966 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_001254096]
81. Y65B4BR.5 icd-2 58321 7.426 0.939 0.938 0.921 0.938 0.852 0.968 0.956 0.914 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
82. B0464.1 dars-1 12331 7.426 0.937 0.934 0.932 0.934 0.831 0.968 0.976 0.914 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
83. W10D9.5 tomm-22 7396 7.413 0.922 0.953 0.948 0.953 0.817 0.934 0.969 0.917 Translocase of Outer Mitochondrial Membrane [Source:RefSeq peptide;Acc:NP_493741]
84. H21P03.1 mbf-1 25586 7.412 0.918 0.926 0.928 0.926 0.859 0.943 0.962 0.950 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
85. T24H7.1 phb-2 28775 7.406 0.952 0.957 0.967 0.957 0.822 0.907 0.919 0.925 Mitochondrial prohibitin complex protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P50093]
86. D2013.7 eif-3.F 21004 7.404 0.926 0.927 0.903 0.927 0.851 0.945 0.968 0.957 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
87. Y48G8AL.8 rpl-17 77686 7.402 0.948 0.978 0.982 0.978 0.684 0.909 0.948 0.975 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
88. Y18D10A.19 fkb-2 48128 7.402 0.932 0.927 0.951 0.927 0.821 0.962 0.976 0.906 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
89. T08B2.9 fars-1 12650 7.401 0.911 0.926 0.886 0.926 0.900 0.931 0.973 0.948 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
90. Y75B12B.2 cyn-7 98281 7.396 0.945 0.947 0.951 0.947 0.822 0.978 0.891 0.915 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
91. Y106G6H.2 pab-1 96744 7.387 0.948 0.958 0.967 0.958 0.659 0.946 0.971 0.980 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
92. M03C11.5 ymel-1 6878 7.386 0.900 0.931 0.906 0.931 0.921 0.900 0.957 0.940 ATP-dependent zinc metalloprotease YME1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P54813]
93. C37A2.8 C37A2.8 3887 7.386 0.974 0.839 0.979 0.839 0.868 0.933 0.971 0.983
94. B0261.4 mrpl-47 8210 7.385 0.938 0.927 0.920 0.927 0.863 0.959 0.959 0.892 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
95. Y45F10D.12 rpl-18 104658 7.384 0.967 0.970 0.969 0.970 0.643 0.905 0.987 0.973 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
96. F10E7.7 rpl-33 81733 7.376 0.936 0.985 0.948 0.985 0.628 0.930 0.977 0.987 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
97. F57B9.5 byn-1 58236 7.363 0.921 0.949 0.956 0.949 0.799 0.946 0.942 0.901 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
98. R74.1 lars-1 8467 7.36 0.939 0.952 0.923 0.952 0.861 0.896 0.892 0.945 Leucine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q09996]
99. Y22D7AL.5 hsp-60 42542 7.339 0.929 0.916 0.914 0.916 0.809 0.980 0.944 0.931 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
100. T01C3.6 rps-16 97002 7.338 0.975 0.965 0.937 0.965 0.605 0.918 0.985 0.988 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]

There are 259 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA