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Results for D2013.1

Gene ID Gene Name Reads Transcripts Annotation
D2013.1 rab-39 4903 D2013.1 RAB family [Source:RefSeq peptide;Acc:NP_495984]

Genes with expression patterns similar to D2013.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. D2013.1 rab-39 4903 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB family [Source:RefSeq peptide;Acc:NP_495984]
2. F08F8.3 kap-1 31437 7.45 0.950 0.907 0.938 0.907 0.927 0.939 0.959 0.923 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
3. T26A5.9 dlc-1 59038 7.429 0.932 0.921 0.954 0.921 0.938 0.957 0.893 0.913 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
4. B0285.1 cdk-12 5900 7.405 0.947 0.899 0.938 0.899 0.967 0.919 0.918 0.918 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
5. F43E2.7 mtch-1 30689 7.403 0.923 0.917 0.953 0.917 0.923 0.931 0.952 0.887 MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
6. ZK637.3 lnkn-1 16095 7.401 0.922 0.891 0.956 0.891 0.958 0.971 0.909 0.903 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
7. R05D11.3 ran-4 15494 7.4 0.944 0.923 0.959 0.923 0.905 0.915 0.928 0.903 Probable nuclear transport factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21735]
8. C35D10.16 arx-6 8242 7.396 0.911 0.927 0.939 0.927 0.969 0.958 0.869 0.896 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
9. F38A5.2 F38A5.2 9024 7.392 0.954 0.894 0.918 0.894 0.949 0.935 0.940 0.908
10. K07C5.1 arx-2 20142 7.378 0.930 0.916 0.938 0.916 0.964 0.948 0.876 0.890 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
11. Y79H2A.6 arx-3 17398 7.367 0.923 0.905 0.920 0.905 0.933 0.966 0.895 0.920 ARp2/3 compleX component [Source:RefSeq peptide;Acc:NP_499570]
12. F26H11.2 nurf-1 13015 7.355 0.912 0.916 0.933 0.916 0.947 0.903 0.956 0.872 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
13. T06G6.9 pfd-3 10945 7.352 0.962 0.871 0.956 0.871 0.952 0.930 0.942 0.868 Probable prefoldin subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:O18054]
14. K11D12.2 pqn-51 15951 7.351 0.944 0.920 0.924 0.920 0.953 0.904 0.931 0.855 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
15. H21P03.1 mbf-1 25586 7.345 0.965 0.873 0.939 0.873 0.959 0.914 0.930 0.892 MBF (multiprotein bridging factor) transcriptional coactivator [Source:RefSeq peptide;Acc:NP_502166]
16. Y62E10A.11 mdt-9 5971 7.339 0.962 0.904 0.962 0.904 0.956 0.847 0.935 0.869 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
17. W04D2.5 mrps-11 5757 7.339 0.963 0.905 0.932 0.905 0.957 0.865 0.953 0.859 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
18. F38A5.1 odr-8 5283 7.334 0.925 0.882 0.905 0.882 0.970 0.928 0.942 0.900 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
19. T05C12.7 cct-1 41264 7.326 0.944 0.875 0.931 0.875 0.954 0.944 0.900 0.903 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
20. M7.1 let-70 85699 7.325 0.894 0.931 0.958 0.931 0.888 0.962 0.905 0.856 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
21. C34E10.1 gop-3 11393 7.322 0.930 0.900 0.957 0.900 0.894 0.928 0.906 0.907 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
22. Y49A3A.1 cept-2 8916 7.319 0.915 0.916 0.924 0.916 0.985 0.932 0.867 0.864 Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
23. R151.9 pfd-5 6951 7.319 0.950 0.868 0.959 0.868 0.957 0.902 0.914 0.901 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
24. T08B2.9 fars-1 12650 7.318 0.955 0.862 0.939 0.862 0.965 0.895 0.955 0.885 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
25. F13G3.4 dylt-1 21345 7.318 0.940 0.870 0.947 0.870 0.956 0.914 0.950 0.871 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
26. M03C11.5 ymel-1 6878 7.315 0.924 0.866 0.938 0.866 0.963 0.929 0.936 0.893 ATP-dependent zinc metalloprotease YME1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P54813]
27. Y111B2A.18 rsp-3 43731 7.315 0.920 0.916 0.945 0.916 0.938 0.872 0.955 0.853 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
28. Y102A5A.1 cand-1 11808 7.313 0.964 0.901 0.930 0.901 0.912 0.925 0.927 0.853 Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:G5ED41]
29. ZK863.6 dpy-30 16177 7.309 0.909 0.891 0.951 0.891 0.974 0.902 0.912 0.879 Dosage compensation protein dpy-30 [Source:UniProtKB/Swiss-Prot;Acc:Q10661]
30. ZK616.6 perm-3 16186 7.304 0.946 0.894 0.958 0.894 0.927 0.876 0.937 0.872 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_001293836]
31. R07B7.3 pqn-53 10459 7.299 0.939 0.871 0.949 0.871 0.934 0.956 0.896 0.883 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
32. Y39G10AR.20 tbca-1 4155 7.299 0.918 0.897 0.925 0.897 0.950 0.914 0.929 0.869 TuBulin folding Cofactor A homolog [Source:RefSeq peptide;Acc:NP_490959]
33. C15H11.3 nxf-1 9528 7.296 0.963 0.922 0.931 0.922 0.867 0.930 0.910 0.851 Nuclear RNA export factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS7]
34. B0261.4 mrpl-47 8210 7.292 0.945 0.864 0.948 0.864 0.963 0.877 0.944 0.887 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
35. F42A6.7 hrp-1 28201 7.284 0.929 0.890 0.942 0.890 0.962 0.868 0.964 0.839 Heterogeneous nuclear ribonucleoprotein A1 [Source:UniProtKB/Swiss-Prot;Acc:Q22037]
36. F33D4.7 emc-6 6534 7.278 0.958 0.862 0.947 0.862 0.952 0.901 0.923 0.873 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
37. C08F8.1 pfd-1 10199 7.276 0.971 0.845 0.926 0.845 0.955 0.888 0.945 0.901 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
38. C25D7.8 otub-1 7941 7.275 0.952 0.880 0.934 0.880 0.951 0.899 0.909 0.870 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
39. R07E5.11 R07E5.11 1170 7.274 0.898 0.844 0.925 0.844 0.961 0.907 0.952 0.943
40. C07G2.3 cct-5 44703 7.27 0.962 0.860 0.949 0.860 0.942 0.919 0.892 0.886 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
41. R07G3.1 cdc-42 35737 7.269 0.908 0.906 0.937 0.906 0.873 0.956 0.856 0.927 Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
42. Y49E10.6 his-72 32293 7.264 0.870 0.909 0.926 0.909 0.959 0.923 0.829 0.939 Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U281]
43. B0303.15 mrpl-11 9889 7.264 0.963 0.861 0.950 0.861 0.959 0.841 0.934 0.895 Probable 39S ribosomal protein L11, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34264]
44. F57A10.3 haf-3 6896 7.26 0.911 0.877 0.952 0.877 0.931 0.893 0.944 0.875 HAlF transporter (PGP related) [Source:RefSeq peptide;Acc:NP_506927]
45. F59E12.11 sam-4 8179 7.259 0.931 0.920 0.932 0.920 0.967 0.858 0.931 0.800
46. C55A6.2 ttll-5 5158 7.259 0.904 0.891 0.922 0.891 0.972 0.909 0.914 0.856 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
47. H20J04.5 pfd-2 8082 7.256 0.934 0.847 0.919 0.847 0.959 0.881 0.941 0.928 Prefoldin subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N5M2]
48. M01B12.3 arx-7 7584 7.256 0.927 0.863 0.930 0.863 0.952 0.933 0.918 0.870 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
49. Y40B1B.5 eif-3.J 15061 7.25 0.951 0.889 0.947 0.889 0.906 0.901 0.926 0.841 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_493365]
50. Y24F12A.2 ragc-1 3950 7.248 0.910 0.878 0.940 0.878 0.965 0.937 0.880 0.860 RAs-related GTP binding protein C homolog [Source:RefSeq peptide;Acc:NP_001293887]
51. T05F1.1 nra-2 7101 7.247 0.915 0.926 0.911 0.926 0.931 0.832 0.959 0.847 Nicalin [Source:RefSeq peptide;Acc:NP_492553]
52. T05H10.5 ufd-2 30044 7.243 0.937 0.897 0.966 0.897 0.916 0.944 0.838 0.848 Probable ubiquitin conjugation factor E4 [Source:UniProtKB/Swiss-Prot;Acc:Q09349]
53. M142.6 rle-1 11584 7.238 0.942 0.897 0.944 0.897 0.882 0.959 0.834 0.883 Regulation of longevity by E3 ubiquitin-protein ligase [Source:UniProtKB/Swiss-Prot;Acc:O45962]
54. B0464.7 baf-1 10161 7.237 0.954 0.885 0.927 0.885 0.937 0.855 0.948 0.846 Barrier-to-autointegration factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03565]
55. T21B10.1 mrpl-50 14595 7.231 0.915 0.868 0.942 0.868 0.980 0.867 0.925 0.866 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_495899]
56. D2023.6 D2023.6 5595 7.23 0.955 0.900 0.924 0.900 0.919 0.864 0.918 0.850
57. T01E8.6 mrps-14 9328 7.23 0.949 0.876 0.940 0.876 0.970 0.826 0.944 0.849 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
58. F17C11.9 eef-1G 37911 7.229 0.941 0.835 0.930 0.835 0.945 0.888 0.950 0.905 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
59. E01A2.2 E01A2.2 12356 7.229 0.930 0.879 0.928 0.879 0.954 0.866 0.930 0.863 Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
60. F01F1.4 rabn-5 5269 7.229 0.848 0.899 0.856 0.899 0.967 0.917 0.914 0.929 RABaptiN (rab effector) [Source:RefSeq peptide;Acc:NP_498266]
61. R07E5.10 pdcd-2 5211 7.228 0.946 0.863 0.923 0.863 0.960 0.907 0.845 0.921 Vacuolar ATPase assembly integral membrane protein VMA21 homolog [Source:UniProtKB/Swiss-Prot;Acc:A5JYQ9]
62. C17G10.4 cdc-14 6262 7.228 0.916 0.919 0.883 0.919 0.957 0.884 0.896 0.854 Probable tyrosine-protein phosphatase cdc-14 [Source:UniProtKB/Swiss-Prot;Acc:P81299]
63. F35G12.3 sel-5 5924 7.226 0.879 0.923 0.898 0.923 0.971 0.862 0.881 0.889 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_001022562]
64. F53F4.3 tbcb-1 6442 7.226 0.923 0.893 0.933 0.893 0.960 0.865 0.908 0.851 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
65. T20D3.8 T20D3.8 6782 7.225 0.961 0.885 0.930 0.885 0.884 0.903 0.896 0.881
66. Y48A6B.13 spat-2 21773 7.224 0.898 0.857 0.952 0.857 0.934 0.938 0.895 0.893 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
67. F57B9.2 let-711 8592 7.223 0.953 0.880 0.909 0.880 0.919 0.874 0.904 0.904 NTL-1a; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q20937]
68. Y71F9AL.10 Y71F9AL.10 4976 7.223 0.950 0.908 0.945 0.908 0.907 0.920 0.850 0.835
69. ZK742.1 xpo-1 20741 7.221 0.871 0.907 0.952 0.907 0.958 0.836 0.953 0.837 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
70. F54A3.3 cct-3 25183 7.219 0.959 0.843 0.919 0.843 0.949 0.932 0.912 0.862 T-complex protein 1 subunit gamma [Source:RefSeq peptide;Acc:NP_494218]
71. T16G1.11 eif-3.K 14014 7.218 0.951 0.867 0.948 0.867 0.917 0.850 0.953 0.865 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
72. B0464.1 dars-1 12331 7.216 0.953 0.859 0.935 0.859 0.934 0.873 0.948 0.855 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
73. F54C8.5 rheb-1 6358 7.216 0.908 0.899 0.900 0.899 0.961 0.848 0.924 0.877 GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
74. B0025.2 csn-2 5205 7.214 0.894 0.926 0.909 0.926 0.944 0.849 0.950 0.816 COP9 signalosome complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O01422]
75. M106.4 gmps-1 12232 7.213 0.917 0.889 0.950 0.889 0.933 0.874 0.896 0.865 Probable GMP synthase [glutamine-hydrolyzing] [Source:UniProtKB/Swiss-Prot;Acc:Q09580]
76. Y71F9AL.14 dnc-5 2428 7.212 0.955 0.866 0.904 0.866 0.943 0.915 0.879 0.884 DyNactin Complex component [Source:RefSeq peptide;Acc:NP_491065]
77. H19N07.1 erfa-3 19869 7.212 0.949 0.863 0.952 0.863 0.917 0.906 0.899 0.863 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
78. F52C9.7 mog-3 9880 7.211 0.893 0.921 0.913 0.921 0.949 0.812 0.956 0.846 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
79. Y54G2A.31 ubc-13 22367 7.211 0.958 0.857 0.935 0.857 0.948 0.943 0.922 0.791 Ubiquitin-conjugating enzyme E2 13 [Source:UniProtKB/Swiss-Prot;Acc:Q95XX0]
80. R12C12.2 ran-5 14517 7.209 0.927 0.926 0.937 0.926 0.951 0.822 0.931 0.789 associated with RAN (nuclear import/export) function [Source:RefSeq peptide;Acc:NP_495208]
81. Y54E5B.4 ubc-16 8386 7.209 0.870 0.919 0.882 0.919 0.965 0.910 0.915 0.829 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_493587]
82. D2013.2 wdfy-2 7286 7.207 0.935 0.902 0.898 0.902 0.966 0.888 0.868 0.848 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
83. Y37E3.9 phb-1 29211 7.206 0.947 0.819 0.911 0.819 0.967 0.896 0.961 0.886 Mitochondrial prohibitin complex protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9BKU4]
84. R10E11.1 cbp-1 20447 7.202 0.904 0.901 0.924 0.901 0.910 0.951 0.876 0.835
85. C52E4.3 snr-4 19308 7.202 0.955 0.867 0.934 0.867 0.962 0.894 0.853 0.870 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
86. F33D4.5 mrpl-1 5337 7.2 0.937 0.905 0.931 0.905 0.959 0.805 0.938 0.820 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
87. T05H4.6 erfa-1 12542 7.196 0.964 0.860 0.916 0.860 0.905 0.864 0.953 0.874 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
88. B0280.1 ggtb-1 3076 7.196 0.921 0.909 0.899 0.909 0.960 0.856 0.881 0.861 Probable geranylgeranyl transferase type-2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P41992]
89. Y65B4A.3 vps-20 8612 7.194 0.907 0.848 0.966 0.848 0.871 0.952 0.915 0.887 related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_490762]
90. K07A12.7 mrps-15 6325 7.192 0.946 0.866 0.921 0.866 0.955 0.865 0.954 0.819 28S ribosomal protein S15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9NAP9]
91. Y56A3A.21 trap-4 58702 7.19 0.917 0.897 0.953 0.897 0.902 0.918 0.860 0.846 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
92. ZK550.4 ZK550.4 5815 7.189 0.891 0.915 0.922 0.915 0.956 0.821 0.897 0.872 TFIIE-alpha protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG49]
93. T14B4.3 T14B4.3 2875 7.189 0.963 0.890 0.931 0.890 0.951 0.809 0.953 0.802
94. F26F4.7 nhl-2 13541 7.188 0.867 0.897 0.932 0.897 0.956 0.887 0.922 0.830 NHL (ring finger b-box coiled coil) domain containing [Source:RefSeq peptide;Acc:NP_498026]
95. Y113G7A.9 dcs-1 2092 7.184 0.962 0.854 0.921 0.854 0.970 0.875 0.934 0.814 m7GpppX diphosphatase [Source:UniProtKB/Swiss-Prot;Acc:G5EFS4]
96. T17E9.2 nmt-1 8017 7.184 0.960 0.892 0.936 0.892 0.910 0.817 0.936 0.841 Probable glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/Swiss-Prot;Acc:P46548]
97. C34E10.5 prmt-5 12277 7.183 0.940 0.869 0.931 0.869 0.940 0.836 0.954 0.844 Protein arginine N-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:P46580]
98. W02F12.6 sna-1 7338 7.182 0.898 0.899 0.903 0.899 0.968 0.855 0.935 0.825 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
99. T03F6.5 lis-1 8818 7.177 0.953 0.834 0.878 0.834 0.968 0.897 0.921 0.892 Lissencephaly-1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9NDC9]
100. B0205.11 mrpl-9 9162 7.176 0.942 0.864 0.934 0.864 0.967 0.845 0.950 0.810 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA