C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for CD4.2

Gene ID Gene Name Reads Transcripts Annotation
CD4.2 crn-2 1289 CD4.2 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_504476]

Genes with expression patterns similar to CD4.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. CD4.2 crn-2 1289 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_504476]
2. H19N07.1 erfa-3 19869 7.338 0.868 0.955 0.918 0.955 0.931 0.922 0.900 0.889 Eukaryotic Release FActor homolog [Source:RefSeq peptide;Acc:NP_001256292]
3. Y54E2A.3 tac-1 6308 7.312 0.884 0.931 0.913 0.931 0.959 0.913 0.897 0.884 TACC (transforming acid coiled coil) protein family [Source:RefSeq peptide;Acc:NP_497059]
4. K11D12.2 pqn-51 15951 7.307 0.905 0.924 0.926 0.924 0.960 0.940 0.885 0.843 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
5. F28H1.3 aars-2 13537 7.297 0.878 0.945 0.928 0.945 0.932 0.953 0.855 0.861 Alanine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:O01541]
6. T21B10.4 T21B10.4 11648 7.295 0.891 0.956 0.901 0.956 0.956 0.922 0.879 0.834
7. ZK1058.4 ccdc-47 8879 7.285 0.876 0.949 0.912 0.949 0.942 0.959 0.865 0.833 CCDC (human Coiled Coil Domain Containing) homolog [Source:RefSeq peptide;Acc:NP_497788]
8. Y38A8.3 ulp-2 7403 7.282 0.860 0.937 0.910 0.937 0.943 0.952 0.871 0.872 Ubiquitin-Like Protease [Source:RefSeq peptide;Acc:NP_494914]
9. ZK742.1 xpo-1 20741 7.279 0.857 0.934 0.929 0.934 0.955 0.957 0.871 0.842 eXPOrtin (nuclear export receptor) [Source:RefSeq peptide;Acc:NP_741567]
10. C25D7.8 otub-1 7941 7.272 0.897 0.928 0.886 0.928 0.950 0.902 0.901 0.880 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
11. F26F4.10 rars-1 9971 7.27 0.868 0.960 0.918 0.960 0.921 0.917 0.877 0.849 Probable arginine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19825]
12. Y46G5A.4 snrp-200 13827 7.268 0.850 0.940 0.933 0.940 0.956 0.920 0.887 0.842 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2G0]
13. K08E7.1 eak-7 18960 7.267 0.904 0.929 0.882 0.929 0.941 0.957 0.855 0.870 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
14. C25A1.4 C25A1.4 15507 7.264 0.894 0.956 0.921 0.956 0.970 0.926 0.840 0.801
15. R09B3.5 mag-1 7496 7.262 0.905 0.932 0.927 0.932 0.973 0.951 0.842 0.800 Protein mago nashi homolog [Source:UniProtKB/Swiss-Prot;Acc:P49029]
16. F52C9.7 mog-3 9880 7.254 0.861 0.931 0.888 0.931 0.971 0.916 0.883 0.873 Masculinisation Of Germline [Source:RefSeq peptide;Acc:NP_498134]
17. C18A3.5 tiar-1 25400 7.246 0.880 0.950 0.914 0.950 0.892 0.922 0.875 0.863 TIA-1/TIAL RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495121]
18. T19C3.8 fem-2 9225 7.245 0.900 0.906 0.918 0.906 0.952 0.966 0.807 0.890 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
19. Y43F4B.4 npp-18 4780 7.245 0.866 0.913 0.935 0.913 0.966 0.956 0.856 0.840 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
20. F58B3.5 mars-1 6729 7.244 0.886 0.945 0.862 0.945 0.967 0.948 0.831 0.860 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
21. H17B01.4 emc-1 9037 7.243 0.816 0.944 0.946 0.944 0.919 0.952 0.856 0.866 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_493980]
22. F32E10.6 cec-5 10643 7.242 0.863 0.950 0.930 0.950 0.944 0.921 0.898 0.786 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_501232]
23. T14G10.3 ttr-53 7558 7.24 0.842 0.955 0.913 0.955 0.938 0.940 0.847 0.850 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_501856]
24. C33H5.12 rsp-6 23342 7.235 0.875 0.970 0.911 0.970 0.928 0.922 0.850 0.809 Probable splicing factor, arginine/serine-rich 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18409]
25. F32A5.7 lsm-4 3785 7.235 0.887 0.927 0.892 0.927 0.965 0.943 0.870 0.824 Probable U6 snRNA-associated Sm-like protein LSm4 [Source:UniProtKB/Swiss-Prot;Acc:Q19952]
26. T28D9.2 rsp-5 6460 7.23 0.884 0.954 0.915 0.954 0.964 0.927 0.850 0.782 Probable splicing factor, arginine/serine-rich 5 [Source:UniProtKB/Swiss-Prot;Acc:Q10021]
27. T16G1.11 eif-3.K 14014 7.227 0.894 0.957 0.896 0.957 0.921 0.933 0.879 0.790 Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/Swiss-Prot;Acc:Q9XUP3]
28. T23H2.1 npp-12 12425 7.226 0.878 0.920 0.903 0.920 0.936 0.951 0.881 0.837 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491855]
29. Y48A6B.13 spat-2 21773 7.225 0.837 0.946 0.888 0.946 0.950 0.896 0.861 0.901 Suppressor of PAr-Two defect [Source:RefSeq peptide;Acc:NP_001255103]
30. T03F1.2 coq-4 3093 7.224 0.945 0.917 0.884 0.917 0.950 0.946 0.792 0.873 Ubiquinone biosynthesis protein coq-4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P91428]
31. W02F12.6 sna-1 7338 7.222 0.891 0.911 0.883 0.911 0.951 0.897 0.888 0.890 Small Nuclear RNA (snRNA) Associated protein [Source:RefSeq peptide;Acc:NP_504701]
32. F33D4.5 mrpl-1 5337 7.221 0.871 0.906 0.921 0.906 0.963 0.945 0.886 0.823 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
33. R144.7 larp-1 24669 7.219 0.820 0.959 0.922 0.959 0.957 0.896 0.870 0.836 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
34. CC4.3 smu-1 4169 7.216 0.887 0.934 0.922 0.934 0.946 0.964 0.800 0.829 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
35. Y54E5A.4 npp-4 6288 7.215 0.893 0.904 0.917 0.904 0.953 0.936 0.861 0.847 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_493552]
36. F30F8.8 taf-5 2008 7.21 0.898 0.909 0.956 0.909 0.923 0.887 0.880 0.848 TAF (TBP-associated transcription factor) family [Source:RefSeq peptide;Acc:NP_492169]
37. T01E8.6 mrps-14 9328 7.209 0.911 0.958 0.878 0.958 0.942 0.934 0.866 0.762 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
38. F56F3.1 ifet-1 25772 7.207 0.866 0.917 0.909 0.917 0.964 0.946 0.880 0.808 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
39. B0464.1 dars-1 12331 7.205 0.864 0.953 0.890 0.953 0.908 0.887 0.875 0.875 Aspartate--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q03577]
40. W01G7.3 rpb-11 7826 7.203 0.909 0.955 0.890 0.955 0.903 0.920 0.875 0.796 Probable DNA-directed RNA polymerase II subunit RPB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVH6]
41. Y41D4B.19 npp-8 12992 7.203 0.845 0.939 0.906 0.939 0.956 0.955 0.822 0.841 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
42. C09G12.9 tsg-101 9451 7.203 0.892 0.963 0.922 0.963 0.904 0.821 0.877 0.861 Tumor Susceptibility Gene homolog [Source:RefSeq peptide;Acc:NP_500364]
43. C18D11.4 rsp-8 18308 7.202 0.859 0.951 0.905 0.951 0.911 0.873 0.873 0.879 SR Protein (splicing factor) [Source:RefSeq peptide;Acc:NP_001255142]
44. B0205.7 kin-3 29775 7.201 0.905 0.951 0.899 0.951 0.884 0.885 0.868 0.858 Casein kinase II subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P18334]
45. F25B3.6 rtfo-1 11965 7.198 0.816 0.939 0.889 0.939 0.958 0.934 0.841 0.882 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
46. T21B10.7 cct-2 13999 7.197 0.861 0.961 0.938 0.961 0.948 0.935 0.758 0.835 T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P47207]
47. E01A2.2 E01A2.2 12356 7.195 0.924 0.965 0.874 0.965 0.869 0.884 0.852 0.862 Serrate RNA effector molecule homolog [Source:UniProtKB/Swiss-Prot;Acc:Q966L5]
48. H20J04.2 athp-2 5149 7.195 0.873 0.948 0.954 0.948 0.870 0.949 0.819 0.834 AT Hook plus PHD finger transcription factor [Source:RefSeq peptide;Acc:NP_494767]
49. W04D2.5 mrps-11 5757 7.194 0.876 0.912 0.921 0.912 0.944 0.962 0.859 0.808 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
50. K04G2.1 iftb-1 12590 7.192 0.921 0.957 0.879 0.957 0.909 0.866 0.843 0.860 Eukaryotic translation initiation factor 2 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q21230]
51. Y74C10AR.3 abtm-1 4152 7.189 0.847 0.964 0.916 0.964 0.903 0.882 0.878 0.835 ABC Transporter, Mitochondrial [Source:RefSeq peptide;Acc:NP_001293285]
52. ZK637.3 lnkn-1 16095 7.183 0.900 0.951 0.891 0.951 0.932 0.872 0.824 0.862 Putative protein tag-256 [Source:RefSeq peptide;Acc:NP_498963]
53. F43G9.9 cpn-1 14505 7.181 0.860 0.955 0.924 0.955 0.877 0.918 0.886 0.806 CalPoNin [Source:RefSeq peptide;Acc:NP_492339]
54. ZK652.9 coq-5 5143 7.18 0.888 0.904 0.881 0.904 0.949 0.962 0.829 0.863 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34666]
55. W08D2.5 catp-6 7281 7.177 0.847 0.921 0.921 0.921 0.971 0.932 0.837 0.827 Probable cation-transporting ATPase W08D2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q27533]
56. C48E7.3 lpd-2 10330 7.177 0.913 0.945 0.887 0.945 0.955 0.886 0.864 0.782 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
57. M01E5.4 M01E5.4 7638 7.176 0.834 0.953 0.918 0.953 0.945 0.922 0.827 0.824
58. R07E5.14 rnp-4 11659 7.175 0.890 0.946 0.937 0.946 0.952 0.937 0.771 0.796 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
59. C53A5.3 hda-1 18413 7.171 0.879 0.911 0.914 0.911 0.967 0.919 0.819 0.851 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
60. F56D1.7 daz-1 23684 7.171 0.877 0.962 0.922 0.962 0.936 0.862 0.882 0.768 DAZ protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20870]
61. Y56A3A.17 npp-16 5391 7.17 0.885 0.922 0.909 0.922 0.961 0.918 0.855 0.798 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_499550]
62. F23F1.1 nfyc-1 9983 7.169 0.868 0.930 0.892 0.930 0.968 0.909 0.861 0.811 Nuclear transcription Factor Y, C (gamma) subunit [Source:RefSeq peptide;Acc:NP_493645]
63. R07E5.11 R07E5.11 1170 7.168 0.915 0.902 0.904 0.902 0.951 0.894 0.876 0.824
64. C46C2.1 wnk-1 15184 7.168 0.824 0.960 0.950 0.960 0.931 0.839 0.845 0.859 Serine/threonine-protein kinase WNK [Source:UniProtKB/Swiss-Prot;Acc:X5M5N0]
65. F18A1.3 lir-1 2995 7.168 0.901 0.935 0.885 0.935 0.960 0.894 0.815 0.843 LIn-26 Related [Source:RefSeq peptide;Acc:NP_001022093]
66. F01F1.8 cct-6 29460 7.166 0.888 0.955 0.933 0.955 0.947 0.922 0.747 0.819 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
67. Y65B4BR.5 icd-2 58321 7.164 0.870 0.911 0.881 0.911 0.954 0.896 0.917 0.824 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
68. T09A5.7 T09A5.7 5907 7.162 0.865 0.958 0.872 0.958 0.941 0.915 0.853 0.800
69. T26A5.5 jhdm-1 12698 7.161 0.826 0.927 0.902 0.927 0.962 0.890 0.852 0.875 JmjC domain-containing histone demethylation protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95Q98]
70. Y51H1A.4 ing-3 8617 7.16 0.848 0.936 0.891 0.936 0.957 0.932 0.843 0.817 Inhibitor of growth protein [Source:RefSeq peptide;Acc:NP_496909]
71. C55A6.2 ttll-5 5158 7.159 0.924 0.924 0.882 0.924 0.952 0.903 0.832 0.818 Tubulin Tyrosine Ligase Like [Source:RefSeq peptide;Acc:NP_001256332]
72. M88.7 cisd-3.1 5713 7.158 0.931 0.903 0.910 0.903 0.969 0.946 0.781 0.815 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
73. T12G3.5 mrpl-51 5192 7.157 0.894 0.932 0.903 0.932 0.938 0.951 0.795 0.812 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
74. R05D11.7 snrp-27 4159 7.156 0.851 0.934 0.909 0.934 0.956 0.900 0.816 0.856 Small Nuclear RibonucleoProtein homolog [Source:RefSeq peptide;Acc:NP_492327]
75. T12D8.3 acbp-5 6816 7.156 0.849 0.956 0.883 0.956 0.906 0.887 0.902 0.817 Acyl-Coenzyme A Binding Protein [Source:RefSeq peptide;Acc:NP_499817]
76. F10C2.2 kup-1 3852 7.155 0.812 0.951 0.917 0.951 0.935 0.898 0.903 0.788
77. F10G7.3 unc-85 5206 7.155 0.869 0.930 0.952 0.930 0.948 0.893 0.845 0.788 Probable histone chaperone asf-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19326]
78. R07B7.3 pqn-53 10459 7.15 0.876 0.924 0.909 0.924 0.959 0.880 0.856 0.822 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
79. ZK1290.4 nfi-1 5353 7.148 0.860 0.911 0.938 0.911 0.949 0.957 0.817 0.805 NFI (Nuclear Factor I) family [Source:RefSeq peptide;Acc:NP_001022505]
80. Y73B6BL.33 hrpf-2 4443 7.147 0.839 0.960 0.941 0.960 0.946 0.913 0.788 0.800 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_001293781]
81. Y55F3AR.3 cct-8 17979 7.146 0.871 0.960 0.893 0.960 0.935 0.936 0.749 0.842 T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q9N358]
82. C27H5.3 fust-1 6978 7.141 0.874 0.954 0.863 0.954 0.919 0.931 0.823 0.823 FUS/TLS RNA binding protein homolog [Source:RefSeq peptide;Acc:NP_495483]
83. C02B10.5 C02B10.5 9171 7.14 0.876 0.872 0.933 0.872 0.911 0.958 0.883 0.835
84. F08D12.1 srpa-72 9890 7.14 0.902 0.951 0.871 0.951 0.902 0.840 0.854 0.869 Signal recognition particle subunit SRP72 [Source:UniProtKB/Swiss-Prot;Acc:P91240]
85. C26E6.4 rpb-2 7053 7.139 0.833 0.937 0.918 0.937 0.926 0.955 0.858 0.775 DNA-directed RNA polymerase II subunit RPB2 [Source:UniProtKB/Swiss-Prot;Acc:Q10578]
86. C45B11.1 pak-2 6114 7.138 0.835 0.918 0.909 0.918 0.934 0.957 0.839 0.828 Serine/threonine-protein kinase pak-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFU0]
87. C08F8.1 pfd-1 10199 7.137 0.899 0.914 0.858 0.914 0.955 0.939 0.853 0.805 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
88. K07D4.3 rpn-11 8834 7.136 0.868 0.950 0.922 0.950 0.943 0.933 0.723 0.847 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]
89. R10E11.3 usp-46 3909 7.134 0.865 0.918 0.924 0.918 0.975 0.886 0.817 0.831 Ubiquitin carboxyl-terminal hydrolase 46 [Source:UniProtKB/Swiss-Prot;Acc:P34547]
90. C24G6.1 syp-2 2843 7.133 0.878 0.927 0.920 0.927 0.951 0.897 0.860 0.773
91. ZK1128.6 ttll-4 6059 7.132 0.831 0.933 0.904 0.933 0.957 0.916 0.837 0.821 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
92. C07G2.3 cct-5 44703 7.131 0.875 0.957 0.903 0.957 0.940 0.932 0.756 0.811 T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:P47209]
93. C41C4.6 ulp-4 13338 7.13 0.812 0.955 0.907 0.955 0.940 0.945 0.791 0.825 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
94. Y37D8A.9 mrg-1 14369 7.13 0.864 0.952 0.927 0.952 0.942 0.934 0.809 0.750 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
95. F55F8.4 cir-1 9437 7.129 0.853 0.927 0.875 0.927 0.964 0.851 0.884 0.848 CIR (transcription factor CBF1 Interacting coRepressor) homolog [Source:RefSeq peptide;Acc:NP_491654]
96. F59B2.7 rab-6.1 10749 7.127 0.895 0.952 0.919 0.952 0.857 0.839 0.850 0.863 Ras-related protein Rab-6.1 [Source:UniProtKB/Swiss-Prot;Acc:P34213]
97. F01G4.3 skih-2 3353 7.126 0.864 0.918 0.951 0.918 0.912 0.878 0.854 0.831 SKI (yeast SuperKIller) Helicase homolog [Source:RefSeq peptide;Acc:NP_502084]
98. T25G3.3 T25G3.3 7285 7.125 0.876 0.936 0.877 0.936 0.952 0.905 0.831 0.812
99. F25H2.9 pas-5 9929 7.125 0.843 0.925 0.954 0.925 0.887 0.882 0.895 0.814 Proteasome subunit alpha type-5 [Source:UniProtKB/Swiss-Prot;Acc:Q95008]
100. W03B1.4 sars-2 2356 7.12 0.802 0.924 0.908 0.924 0.966 0.950 0.846 0.800 Seryl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_500549]

There are 421 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA