C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y54F10AM.10

Gene ID Gene Name Reads Transcripts Annotation
Y54F10AM.10 rbc-2 3005 Y54F10AM.10 RaBConnectin related [Source:RefSeq peptide;Acc:NP_497573]

Genes with expression patterns similar to Y54F10AM.10

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y54F10AM.10 rbc-2 3005 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RaBConnectin related [Source:RefSeq peptide;Acc:NP_497573]
2. ZK1307.6 fzr-1 8507 7.254 0.931 0.959 0.921 0.959 0.835 0.918 0.891 0.840 FiZzy Related family [Source:RefSeq peptide;Acc:NP_496075]
3. T20D3.7 vps-26 9349 7.216 0.959 0.944 0.923 0.944 0.832 0.921 0.885 0.808 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
4. F55A12.3 ppk-1 8598 7.185 0.919 0.918 0.893 0.918 0.751 0.960 0.892 0.934 PIP Kinase [Source:RefSeq peptide;Acc:NP_491576]
5. Y73B6A.5 lin-45 10864 7.163 0.907 0.923 0.886 0.923 0.861 0.956 0.900 0.807 Raf homolog serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q07292]
6. M01B12.3 arx-7 7584 7.161 0.968 0.900 0.918 0.900 0.832 0.925 0.883 0.835 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
7. C26E6.11 mmab-1 4385 7.123 0.957 0.937 0.929 0.937 0.827 0.938 0.735 0.863 MethylMalonic Aciduria type B homolog [Source:RefSeq peptide;Acc:NP_498038]
8. W06D4.5 snx-3 13450 7.118 0.954 0.893 0.928 0.893 0.758 0.948 0.859 0.885 Sorting NeXin [Source:RefSeq peptide;Acc:NP_492437]
9. F38A5.1 odr-8 5283 7.105 0.952 0.934 0.895 0.934 0.791 0.879 0.852 0.868 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
10. B0205.9 B0205.9 3651 7.08 0.957 0.936 0.950 0.936 0.847 0.891 0.867 0.696
11. ZK792.6 let-60 16967 7.047 0.951 0.914 0.913 0.914 0.709 0.878 0.831 0.937 Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
12. F18A1.2 lin-26 8503 7.043 0.919 0.950 0.916 0.950 0.870 0.889 0.847 0.702 Transcription factor lin-26 [Source:UniProtKB/Swiss-Prot;Acc:Q27355]
13. T24F1.1 raga-1 16171 7.041 0.954 0.929 0.886 0.929 0.772 0.900 0.867 0.804 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
14. F47D12.4 hmg-1.2 13779 7.036 0.955 0.940 0.907 0.940 0.776 0.902 0.791 0.825 High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]
15. C28D4.2 cka-1 7191 7.034 0.930 0.952 0.922 0.952 0.754 0.767 0.864 0.893 Choline Kinase A [Source:RefSeq peptide;Acc:NP_501732]
16. B0280.1 ggtb-1 3076 7.024 0.951 0.944 0.845 0.944 0.763 0.878 0.895 0.804 Probable geranylgeranyl transferase type-2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P41992]
17. R07E5.10 pdcd-2 5211 7.021 0.958 0.959 0.876 0.959 0.779 0.886 0.814 0.790 Vacuolar ATPase assembly integral membrane protein VMA21 homolog [Source:UniProtKB/Swiss-Prot;Acc:A5JYQ9]
18. C54G10.3 pmp-3 8899 7.008 0.896 0.926 0.912 0.926 0.684 0.961 0.838 0.865 Peroxisomal Membrane Protein related [Source:RefSeq peptide;Acc:NP_001256607]
19. B0393.2 rbg-3 6701 7.002 0.874 0.966 0.903 0.966 0.885 0.789 0.831 0.788 RaB GAP related [Source:RefSeq peptide;Acc:NP_497979]
20. K10C3.6 nhr-49 10681 6.996 0.927 0.922 0.913 0.922 0.736 0.951 0.777 0.848 Nuclear hormone receptor family member nhr-49 [Source:UniProtKB/Swiss-Prot;Acc:O45666]
21. C52E4.3 snr-4 19308 6.992 0.955 0.927 0.947 0.927 0.812 0.865 0.814 0.745 Probable small nuclear ribonucleoprotein Sm D2 [Source:UniProtKB/Swiss-Prot;Acc:Q18786]
22. ZK1098.5 trpp-3 3389 6.977 0.966 0.927 0.900 0.927 0.807 0.856 0.829 0.765 Probable trafficking protein particle complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34605]
23. Y62E10A.11 mdt-9 5971 6.968 0.951 0.915 0.907 0.915 0.860 0.792 0.847 0.781 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
24. F53A2.4 nud-1 7818 6.964 0.958 0.943 0.914 0.943 0.871 0.778 0.844 0.713 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_499749]
25. F37C12.2 epg-4 3983 6.962 0.922 0.912 0.885 0.912 0.739 0.953 0.784 0.855 Ectopic P granules protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20123]
26. R07B7.3 pqn-53 10459 6.961 0.957 0.908 0.912 0.908 0.720 0.882 0.911 0.763 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_506023]
27. Y73B6BL.30 blos-2 6227 6.956 0.955 0.888 0.909 0.888 0.854 0.879 0.835 0.748 Biogenesis of lysosome-related organelles complex 1 subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q95XD3]
28. F53F4.3 tbcb-1 6442 6.953 0.962 0.889 0.889 0.889 0.863 0.827 0.866 0.768 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
29. T26A5.9 dlc-1 59038 6.947 0.952 0.911 0.883 0.911 0.697 0.901 0.877 0.815 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
30. B0035.12 sart-3 7188 6.932 0.934 0.952 0.920 0.952 0.840 0.738 0.861 0.735 human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
31. C08F8.1 pfd-1 10199 6.93 0.958 0.894 0.854 0.894 0.820 0.838 0.864 0.808 Probable prefoldin subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17827]
32. C42C1.13 C42C1.13 1509 6.929 0.956 0.828 0.936 0.828 0.809 0.882 0.862 0.828 Protein-lysine methyltransferase C42C1.13 [Source:UniProtKB/Swiss-Prot;Acc:A7IQW5]
33. F43G9.5 cfim-1 9169 6.927 0.964 0.917 0.903 0.917 0.828 0.808 0.873 0.717 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
34. R06C1.2 fdps-1 4504 6.924 0.944 0.956 0.802 0.956 0.780 0.894 0.841 0.751 Farnesyl DiPhosphate Synthetase [Source:RefSeq peptide;Acc:NP_493027]
35. H38K22.3 tag-131 9318 6.923 0.945 0.950 0.860 0.950 0.691 0.927 0.786 0.814 Neuferricin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXA7]
36. D2024.6 cap-1 13880 6.921 0.956 0.919 0.915 0.919 0.664 0.908 0.825 0.815 F-actin-capping protein subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P34685]
37. R74.8 R74.8 7722 6.913 0.956 0.934 0.875 0.934 0.828 0.864 0.853 0.669
38. F58G11.6 ccz-1 5655 6.913 0.920 0.958 0.911 0.958 0.741 0.851 0.839 0.735
39. F39B2.1 hinf-1 10002 6.912 0.893 0.951 0.894 0.951 0.738 0.855 0.883 0.747 HIstone Nuclear Factor p (P) homolog [Source:RefSeq peptide;Acc:NP_493579]
40. T12A2.2 stt-3 18807 6.906 0.940 0.951 0.922 0.951 0.793 0.809 0.750 0.790 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3 [Source:UniProtKB/Swiss-Prot;Acc:P46975]
41. F33D4.7 emc-6 6534 6.892 0.954 0.916 0.913 0.916 0.755 0.855 0.831 0.752 EMC Endoplasmic Membrane protein Complex (yeast EMC) homolog [Source:RefSeq peptide;Acc:NP_501258]
42. B0205.11 mrpl-9 9162 6.891 0.973 0.919 0.930 0.919 0.784 0.829 0.845 0.692 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_492810]
43. ZC410.2 mppb-1 3991 6.889 0.954 0.924 0.854 0.924 0.840 0.849 0.862 0.682 Mitochondrial Processing Peptidase Beta [Source:RefSeq peptide;Acc:NP_501576]
44. K11D12.2 pqn-51 15951 6.887 0.955 0.949 0.908 0.949 0.765 0.808 0.863 0.690 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
45. T01E8.6 mrps-14 9328 6.877 0.977 0.930 0.925 0.930 0.812 0.788 0.828 0.687 Probable 40S ribosomal protein S14, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P49391]
46. R07E5.14 rnp-4 11659 6.876 0.951 0.919 0.889 0.919 0.854 0.827 0.864 0.653 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
47. C23G10.8 C23G10.8 4642 6.872 0.916 0.955 0.891 0.955 0.876 0.776 0.841 0.662
48. Y71F9B.4 snr-7 13542 6.872 0.959 0.912 0.874 0.912 0.837 0.797 0.881 0.700 Probable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:Q9N4G9]
49. F56F3.1 ifet-1 25772 6.87 0.941 0.950 0.950 0.950 0.762 0.785 0.846 0.686 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
50. Y55F3AM.12 dcap-1 8679 6.866 0.939 0.951 0.906 0.951 0.872 0.759 0.856 0.632 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
51. F58E10.3 ddx-17 15107 6.865 0.949 0.953 0.913 0.953 0.756 0.792 0.887 0.662 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
52. ZK637.2 ZK637.2 13153 6.852 0.954 0.926 0.880 0.926 0.783 0.834 0.796 0.753
53. C25A1.4 C25A1.4 15507 6.837 0.954 0.934 0.887 0.934 0.810 0.800 0.836 0.682
54. F08F8.3 kap-1 31437 6.837 0.971 0.911 0.930 0.911 0.671 0.797 0.869 0.777 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
55. T08B2.9 fars-1 12650 6.834 0.967 0.934 0.913 0.934 0.723 0.785 0.829 0.749 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
56. C34E10.1 gop-3 11393 6.827 0.960 0.945 0.892 0.945 0.681 0.807 0.807 0.790 SAM50-like protein gop-3 [Source:UniProtKB/Swiss-Prot;Acc:P46576]
57. W04D2.5 mrps-11 5757 6.827 0.958 0.890 0.933 0.890 0.765 0.879 0.812 0.700 Mitochondrial Ribosomal Protein, Small [Source:RefSeq peptide;Acc:NP_506131]
58. C27B7.5 C27B7.5 6331 6.827 0.954 0.902 0.893 0.902 0.828 0.721 0.861 0.766
59. T19B4.4 dnj-21 4956 6.827 0.954 0.916 0.886 0.916 0.734 0.835 0.778 0.808 Mitochondrial import inner membrane translocase subunit TIM14 [Source:UniProtKB/Swiss-Prot;Acc:P91454]
60. K08F4.2 gtbp-1 25222 6.825 0.949 0.953 0.896 0.953 0.798 0.745 0.865 0.666 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
61. Y82E9BR.15 elc-1 7115 6.825 0.951 0.845 0.899 0.845 0.760 0.922 0.852 0.751 ELongin C [Source:RefSeq peptide;Acc:NP_497405]
62. Y73B6BL.32 lsm-8 11002 6.82 0.957 0.919 0.916 0.919 0.801 0.800 0.847 0.661 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_500964]
63. F09G8.3 mrps-9 2039 6.819 0.954 0.819 0.927 0.819 0.838 0.885 0.869 0.708 Probable 40S ribosomal protein S9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34388]
64. T11G6.1 hars-1 7908 6.818 0.955 0.934 0.884 0.934 0.738 0.766 0.855 0.752 Histidine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:P34183]
65. T22D1.4 ribo-1 11776 6.815 0.932 0.957 0.910 0.957 0.742 0.787 0.747 0.783 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH4]
66. Y18D10A.17 car-1 87364 6.814 0.955 0.908 0.910 0.908 0.769 0.821 0.838 0.705 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
67. F08F8.2 hmgr-1 6483 6.81 0.955 0.954 0.872 0.954 0.709 0.783 0.761 0.822 3-hydroxy-3-methylglutaryl coenzyme A reductase [Source:RefSeq peptide;Acc:NP_498626]
68. F58B3.5 mars-1 6729 6.804 0.950 0.932 0.898 0.932 0.828 0.758 0.864 0.642 Methionine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q20970]
69. B0414.5 cpb-3 11584 6.804 0.942 0.953 0.915 0.953 0.870 0.735 0.820 0.616 Cytoplasmic polyadenylation element-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O01835]
70. D2096.2 praf-3 18471 6.801 0.955 0.927 0.914 0.927 0.674 0.854 0.724 0.826 Prenylated Rab Acceptor 1 domain Family [Source:RefSeq peptide;Acc:NP_001023104]
71. T02C12.2 snpc-3.4 1385 6.8 0.967 0.915 0.875 0.915 0.830 0.772 0.754 0.772 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_497807]
72. R151.9 pfd-5 6951 6.8 0.964 0.857 0.887 0.857 0.811 0.832 0.826 0.766 Probable prefoldin subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q21993]
73. C25D7.8 otub-1 7941 6.798 0.957 0.916 0.887 0.916 0.770 0.779 0.819 0.754 Ubiquitin thioesterase otubain-like [Source:UniProtKB/Swiss-Prot;Acc:Q9XVR6]
74. T12G3.5 mrpl-51 5192 6.798 0.963 0.931 0.861 0.931 0.771 0.831 0.850 0.660 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
75. K11H3.6 mrpl-36 7328 6.797 0.954 0.931 0.887 0.931 0.811 0.738 0.833 0.712 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
76. Y46G5A.31 gsy-1 22792 6.793 0.942 0.956 0.881 0.956 0.614 0.890 0.704 0.850 Glycogen [starch] synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9U2D9]
77. F52B5.3 F52B5.3 2077 6.792 0.936 0.951 0.921 0.951 0.817 0.766 0.816 0.634
78. Y54E10A.5 dnc-6 4442 6.79 0.958 0.881 0.895 0.881 0.693 0.861 0.766 0.855 Dynactin subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3F1]
79. B0379.4 scpl-1 14783 6.789 0.946 0.959 0.887 0.959 0.644 0.786 0.795 0.813 SCP (Small C-terminal domain Phosphatase)-Like phosphatase [Source:RefSeq peptide;Acc:NP_740911]
80. C14A4.5 crn-5 1759 6.786 0.956 0.909 0.910 0.909 0.760 0.794 0.834 0.714 Cell-death-Related Nuclease [Source:RefSeq peptide;Acc:NP_496284]
81. C09H6.3 mau-2 3280 6.785 0.934 0.955 0.902 0.955 0.758 0.814 0.820 0.647 Maternal uncoordinated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O17581]
82. ZK652.9 coq-5 5143 6.783 0.973 0.893 0.876 0.893 0.776 0.840 0.808 0.724 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34666]
83. D2013.2 wdfy-2 7286 6.781 0.956 0.907 0.892 0.907 0.764 0.803 0.773 0.779 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
84. T05H4.6 erfa-1 12542 6.777 0.967 0.946 0.943 0.946 0.682 0.788 0.794 0.711 Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:O16520]
85. F26H9.1 prom-1 6444 6.775 0.944 0.951 0.885 0.951 0.833 0.741 0.824 0.646 PRogression Of Meiosis [Source:RefSeq peptide;Acc:NP_492477]
86. C45B11.1 pak-2 6114 6.774 0.856 0.950 0.847 0.950 0.779 0.864 0.817 0.711 Serine/threonine-protein kinase pak-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFU0]
87. M88.7 cisd-3.1 5713 6.766 0.953 0.880 0.882 0.880 0.766 0.768 0.861 0.776 CDGSH Iron Sulfur Domain protein homolog [Source:RefSeq peptide;Acc:NP_497920]
88. T19A6.3 nepr-1 6606 6.763 0.958 0.936 0.904 0.936 0.726 0.805 0.791 0.707 Nuclear envelope phosphatase-regulatory subunit 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XXN3]
89. Y43F4B.4 npp-18 4780 6.757 0.951 0.914 0.866 0.914 0.797 0.823 0.851 0.641 Nucleoporin SEH1 [Source:UniProtKB/Swiss-Prot;Acc:O45933]
90. C15H11.4 dhs-22 21674 6.755 0.962 0.933 0.903 0.933 0.668 0.806 0.810 0.740 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
91. Y73B6BL.2 htp-2 5257 6.752 0.967 0.907 0.942 0.907 0.858 0.734 0.804 0.633 Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500981]
92. C55C3.5 perm-5 7665 6.751 0.936 0.956 0.915 0.956 0.712 0.823 0.712 0.741 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500848]
93. Y73B6BL.6 sqd-1 41708 6.746 0.955 0.940 0.910 0.940 0.690 0.848 0.775 0.688 homologous to Drosophila SQD (squid) protein [Source:RefSeq peptide;Acc:NP_001023573]
94. Y87G2A.6 cyn-15 2566 6.745 0.901 0.952 0.860 0.952 0.817 0.787 0.850 0.626 CYclophyliN [Source:RefSeq peptide;Acc:NP_493378]
95. Y50D7A.9 taco-1 5949 6.744 0.952 0.937 0.885 0.937 0.767 0.748 0.849 0.669 Translational Activator of Cytochrome c Oxidase [Source:RefSeq peptide;Acc:NP_497183]
96. F33D4.5 mrpl-1 5337 6.739 0.950 0.934 0.898 0.934 0.796 0.759 0.787 0.681 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_501257]
97. Y119C1B.4 mrpl-19 2634 6.738 0.963 0.828 0.850 0.828 0.773 0.885 0.841 0.770 Probable 39S ribosomal protein L19, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q95Y83]
98. T28D9.10 snr-3 9995 6.735 0.957 0.921 0.896 0.921 0.801 0.750 0.867 0.622 Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
99. K07B1.5 acl-14 7416 6.734 0.952 0.943 0.926 0.943 0.738 0.780 0.616 0.836 ACyLtransferase-like [Source:RefSeq peptide;Acc:NP_505412]
100. C46A5.9 hcf-1 6295 6.734 0.908 0.950 0.906 0.950 0.829 0.755 0.859 0.577 human HCF1 related [Source:RefSeq peptide;Acc:NP_501279]

There are 327 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA