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Results for C55C3.5

Gene ID Gene Name Reads Transcripts Annotation
C55C3.5 perm-5 7665 C55C3.5 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500848]

Genes with expression patterns similar to C55C3.5

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C55C3.5 perm-5 7665 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500848]
2. R06A4.4 imb-2 10302 7.43 0.960 0.975 0.985 0.975 0.912 0.917 0.761 0.945 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
3. F58G11.6 ccz-1 5655 7.405 0.951 0.988 0.976 0.988 0.904 0.975 0.716 0.907
4. F28D1.10 gex-3 5286 7.404 0.975 0.974 0.987 0.974 0.929 0.948 0.825 0.792 Membrane-associated protein gex-3 [Source:UniProtKB/Swiss-Prot;Acc:P55163]
5. F43G9.5 cfim-1 9169 7.398 0.958 0.975 0.974 0.975 0.894 0.958 0.731 0.933 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
6. ZK484.4 ZK484.4 6097 7.393 0.940 0.973 0.974 0.973 0.929 0.928 0.785 0.891
7. T14G10.6 tsp-12 10308 7.39 0.920 0.962 0.949 0.962 0.946 0.969 0.765 0.917 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
8. T20D3.7 vps-26 9349 7.386 0.940 0.988 0.984 0.988 0.931 0.940 0.809 0.806 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
9. Y38C9A.2 cgp-1 11756 7.383 0.963 0.960 0.967 0.960 0.926 0.949 0.750 0.908 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
10. C36A4.5 maph-1.3 15493 7.373 0.948 0.961 0.982 0.961 0.911 0.972 0.765 0.873 Microtubule-Associated Protein Homolog [Source:RefSeq peptide;Acc:NP_497778]
11. T26E3.3 par-6 8650 7.363 0.952 0.978 0.982 0.978 0.903 0.936 0.770 0.864 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
12. C17H12.13 anat-1 12995 7.354 0.933 0.967 0.978 0.967 0.898 0.969 0.750 0.892 AANAT (Arylalkylamine N-AcetylTransferase) homolog [Source:RefSeq peptide;Acc:NP_001076663]
13. T24H10.3 dnj-23 11446 7.349 0.924 0.949 0.945 0.949 0.904 0.960 0.784 0.934 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
14. R05D11.8 edc-3 5244 7.342 0.965 0.980 0.974 0.980 0.931 0.921 0.704 0.887 yeast Enhancer of DeCapping homolog [Source:RefSeq peptide;Acc:NP_492328]
15. F21C3.4 rde-2 6286 7.334 0.887 0.971 0.948 0.971 0.920 0.950 0.736 0.951
16. F01F1.8 cct-6 29460 7.333 0.891 0.941 0.958 0.941 0.919 0.960 0.770 0.953 T-complex protein 1 subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:P46550]
17. K07A1.12 lin-53 15817 7.331 0.904 0.970 0.966 0.970 0.894 0.966 0.710 0.951 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
18. D1007.8 D1007.8 1265 7.33 0.960 0.966 0.982 0.966 0.897 0.941 0.762 0.856
19. C26E6.7 eri-9 8069 7.33 0.928 0.974 0.962 0.974 0.872 0.947 0.749 0.924 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
20. F43G6.9 patr-1 23000 7.328 0.932 0.971 0.952 0.971 0.918 0.911 0.713 0.960 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
21. Y41D4B.13 ced-2 10100 7.328 0.950 0.970 0.984 0.970 0.902 0.955 0.710 0.887 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
22. Y14H12B.2 Y14H12B.2 6496 7.326 0.927 0.956 0.970 0.956 0.881 0.967 0.755 0.914
23. Y18D10A.17 car-1 87364 7.319 0.930 0.918 0.939 0.918 0.930 0.988 0.784 0.912 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
24. C48G7.3 rin-1 9029 7.318 0.961 0.979 0.973 0.979 0.928 0.923 0.740 0.835 RIN (Ras/Rab INteractor) homolog [Source:RefSeq peptide;Acc:NP_001263893]
25. F58E10.3 ddx-17 15107 7.308 0.949 0.961 0.964 0.961 0.833 0.939 0.769 0.932 DEAD boX helicase homolog [Source:RefSeq peptide;Acc:NP_001041134]
26. C18E9.3 szy-20 6819 7.307 0.914 0.973 0.976 0.973 0.883 0.960 0.745 0.883 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495909]
27. W01A8.5 tofu-5 5678 7.297 0.945 0.969 0.951 0.969 0.872 0.975 0.701 0.915 Twenty One u-rna (21U-RNA) biogenesis Fouled Up [Source:RefSeq peptide;Acc:NP_492002]
28. M01E11.5 cey-3 20931 7.294 0.949 0.967 0.966 0.967 0.888 0.946 0.721 0.890 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491631]
29. ZK1010.3 frg-1 3533 7.287 0.934 0.972 0.961 0.972 0.860 0.915 0.775 0.898 Protein FRG1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O18282]
30. K03B4.2 K03B4.2 21796 7.286 0.946 0.972 0.923 0.972 0.905 0.888 0.742 0.938
31. F22G12.5 F22G12.5 5456 7.286 0.896 0.977 0.976 0.977 0.863 0.866 0.884 0.847
32. Y55F3AM.12 dcap-1 8679 7.286 0.938 0.982 0.975 0.982 0.886 0.893 0.734 0.896 mRNA DeCAPping enzyme [Source:RefSeq peptide;Acc:NP_500030]
33. C48E7.2 let-611 2191 7.285 0.886 0.962 0.953 0.962 0.889 0.974 0.775 0.884
34. C02F5.4 cids-1 3125 7.285 0.946 0.965 0.954 0.965 0.874 0.936 0.731 0.914 CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
35. D1046.1 cfim-2 4266 7.283 0.937 0.973 0.971 0.973 0.891 0.922 0.690 0.926 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_001255355]
36. Y42H9B.2 rig-4 5088 7.282 0.927 0.974 0.955 0.974 0.861 0.960 0.842 0.789 Protein sidekick homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X8]
37. R07E5.14 rnp-4 11659 7.281 0.934 0.964 0.952 0.964 0.868 0.940 0.719 0.940 RNA-binding protein 8A [Source:RefSeq peptide;Acc:NP_497891]
38. F21D5.6 F21D5.6 1798 7.281 0.935 0.949 0.965 0.949 0.876 0.929 0.784 0.894
39. ZK1128.6 ttll-4 6059 7.277 0.902 0.972 0.962 0.972 0.904 0.926 0.691 0.948 Tubulin polyglutamylase ttll-4 [Source:UniProtKB/Swiss-Prot;Acc:Q09647]
40. F39B2.1 hinf-1 10002 7.276 0.936 0.984 0.983 0.984 0.852 0.964 0.665 0.908 HIstone Nuclear Factor p (P) homolog [Source:RefSeq peptide;Acc:NP_493579]
41. Y41D4B.19 npp-8 12992 7.275 0.936 0.961 0.971 0.961 0.909 0.935 0.718 0.884 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
42. C48E7.3 lpd-2 10330 7.275 0.915 0.968 0.952 0.968 0.922 0.871 0.755 0.924 LiPid Depleted [Source:RefSeq peptide;Acc:NP_491806]
43. F09G2.9 attf-2 14771 7.275 0.945 0.965 0.951 0.965 0.845 0.953 0.723 0.928 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
44. ZK1307.6 fzr-1 8507 7.274 0.924 0.969 0.966 0.969 0.896 0.950 0.730 0.870 FiZzy Related family [Source:RefSeq peptide;Acc:NP_496075]
45. F28B12.3 vrk-1 7133 7.273 0.949 0.988 0.963 0.988 0.924 0.890 0.745 0.826 Serine/threonine-protein kinase VRK1 [Source:UniProtKB/Swiss-Prot;Acc:Q19848]
46. Y76A2B.6 scav-2 7247 7.271 0.946 0.961 0.953 0.961 0.881 0.880 0.830 0.859 SCAVenger receptor (CD36 family) related [Source:RefSeq peptide;Acc:NP_499802]
47. F41H10.11 sand-1 5039 7.269 0.938 0.970 0.942 0.970 0.887 0.945 0.774 0.843 SAND endocytosis protein family [Source:RefSeq peptide;Acc:NP_500791]
48. T19B4.2 npp-7 13073 7.269 0.943 0.972 0.964 0.972 0.873 0.897 0.739 0.909 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_491665]
49. B0285.1 cdk-12 5900 7.269 0.949 0.965 0.971 0.965 0.923 0.818 0.738 0.940 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
50. C15H11.8 rpoa-12 2257 7.268 0.946 0.943 0.982 0.943 0.887 0.965 0.714 0.888 DNA-directed RNA polymerase subunit [Source:RefSeq peptide;Acc:NP_506572]
51. Y47D3A.26 smc-3 6256 7.267 0.954 0.943 0.963 0.943 0.911 0.963 0.716 0.874 Structural maintenance of chromosomes protein 3 [Source:UniProtKB/Swiss-Prot;Acc:B2FDA8]
52. Y37D8A.9 mrg-1 14369 7.267 0.943 0.968 0.962 0.968 0.878 0.918 0.700 0.930 human MRG (Mortality factor-Related Gene) related [Source:RefSeq peptide;Acc:NP_499675]
53. C43E11.10 cdc-6 5331 7.267 0.974 0.982 0.943 0.982 0.830 0.890 0.765 0.901 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
54. ZK973.11 ZK973.11 2422 7.266 0.946 0.953 0.966 0.953 0.907 0.927 0.752 0.862
55. F46F11.2 cey-2 47143 7.264 0.950 0.977 0.907 0.977 0.882 0.936 0.768 0.867 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
56. F54C1.3 mes-3 4125 7.261 0.952 0.974 0.957 0.974 0.863 0.956 0.765 0.820 Polycomb protein mes-3 [Source:UniProtKB/Swiss-Prot;Acc:Q10665]
57. T05C12.7 cct-1 41264 7.259 0.928 0.969 0.946 0.969 0.896 0.873 0.751 0.927 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
58. K07C5.1 arx-2 20142 7.257 0.934 0.980 0.952 0.980 0.917 0.831 0.791 0.872 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
59. F44E2.8 F44E2.8 12814 7.256 0.926 0.961 0.949 0.961 0.866 0.905 0.790 0.898
60. Y73B6A.5 lin-45 10864 7.251 0.958 0.977 0.973 0.977 0.857 0.910 0.759 0.840 Raf homolog serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q07292]
61. C01F6.8 icln-1 6586 7.251 0.934 0.956 0.942 0.956 0.851 0.926 0.756 0.930 ICLN (ICLn) ion channel homolog [Source:RefSeq peptide;Acc:NP_001021288]
62. Y43F4B.3 set-25 8036 7.251 0.941 0.970 0.952 0.970 0.904 0.945 0.680 0.889 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_499738]
63. F55G1.8 plk-3 12036 7.25 0.955 0.975 0.951 0.975 0.916 0.884 0.746 0.848 Serine/threonine-protein kinase plk-3 [Source:UniProtKB/Swiss-Prot;Acc:Q20845]
64. K04G2.2 aho-3 15189 7.25 0.928 0.962 0.954 0.962 0.912 0.885 0.714 0.933
65. C01G8.3 dhs-1 5394 7.249 0.974 0.976 0.980 0.976 0.843 0.919 0.678 0.903 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_491557]
66. F55A12.5 F55A12.5 6612 7.248 0.939 0.978 0.884 0.978 0.917 0.969 0.735 0.848
67. T23G11.3 gld-1 41748 7.248 0.886 0.958 0.943 0.958 0.881 0.957 0.753 0.912 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
68. F56F3.1 ifet-1 25772 7.248 0.906 0.980 0.953 0.980 0.909 0.919 0.684 0.917 Translational repressor ifet-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20898]
69. C41C4.6 ulp-4 13338 7.248 0.919 0.954 0.952 0.954 0.896 0.907 0.736 0.930 Ubiquitin-like protease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q09275]
70. Y73B6BL.3 exos-2 2624 7.248 0.950 0.961 0.959 0.961 0.897 0.939 0.707 0.874 EXOSome (multiexonuclease complex) component [Source:RefSeq peptide;Acc:NP_500978]
71. F45E12.2 brf-1 4667 7.246 0.948 0.968 0.982 0.968 0.916 0.915 0.754 0.795 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
72. F44G4.4 tdp-1 3335 7.246 0.943 0.964 0.961 0.964 0.865 0.962 0.725 0.862 Tar DNA-binding protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:D0VWM8]
73. R74.7 R74.7 2689 7.246 0.939 0.950 0.979 0.950 0.917 0.953 0.703 0.855 Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q22031]
74. C38C10.2 slc-17.2 6819 7.242 0.921 0.961 0.977 0.961 0.883 0.878 0.761 0.900 Uncharacterized transporter slc-17.2 [Source:UniProtKB/Swiss-Prot;Acc:Q03567]
75. Y39E4B.2 snpc-1.2 5800 7.242 0.934 0.975 0.965 0.975 0.896 0.906 0.711 0.880 SNAPc (Small Nuclear RNA Activating Complex) homolog [Source:RefSeq peptide;Acc:NP_499719]
76. Y71G12B.9 lin-65 7476 7.241 0.934 0.976 0.948 0.976 0.896 0.902 0.693 0.916 LIN-65L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q95XN0]
77. T05H4.11 T05H4.11 12835 7.24 0.847 0.975 0.913 0.975 0.885 0.963 0.782 0.900
78. T26A5.7 set-1 6948 7.239 0.888 0.952 0.984 0.952 0.910 0.931 0.722 0.900 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
79. Y57E12AL.5 mdt-6 3828 7.234 0.960 0.966 0.947 0.966 0.853 0.925 0.733 0.884 Mediator of RNA polymerase II transcription subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9N337]
80. Y71G12B.12 atg-5 5575 7.234 0.910 0.980 0.962 0.980 0.920 0.843 0.727 0.912 Autophagy protein 5 [Source:RefSeq peptide;Acc:NP_001293440]
81. T24F1.1 raga-1 16171 7.233 0.938 0.964 0.943 0.964 0.913 0.912 0.708 0.891 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
82. T10G3.5 eea-1 7675 7.232 0.935 0.953 0.962 0.953 0.942 0.888 0.730 0.869 EEA1 (Early Endosome Antigen, Rab effector) homolog [Source:RefSeq peptide;Acc:NP_001024127]
83. K11D12.2 pqn-51 15951 7.231 0.941 0.979 0.964 0.979 0.902 0.893 0.665 0.908 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_504355]
84. T01B7.6 trcs-2 9792 7.23 0.926 0.980 0.969 0.980 0.910 0.904 0.709 0.852 TRansport of membrane to Cell Surface [Source:RefSeq peptide;Acc:NP_495857]
85. W10D9.4 nfyb-1 2584 7.228 0.963 0.965 0.944 0.965 0.889 0.938 0.763 0.801 Nuclear transcription Factor Y, B (beta) subunit [Source:RefSeq peptide;Acc:NP_493740]
86. T12G3.5 mrpl-51 5192 7.227 0.914 0.963 0.921 0.963 0.872 0.944 0.726 0.924 39S ribosomal protein L51, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22438]
87. C34D4.12 cyn-12 7363 7.225 0.938 0.972 0.916 0.972 0.869 0.956 0.701 0.901 CYclophyliN [Source:RefSeq peptide;Acc:NP_001293687]
88. Y105E8A.22 exc-4 6168 7.224 0.915 0.961 0.955 0.961 0.921 0.947 0.673 0.891 Chloride intracellular channel exc-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8WQA4]
89. C17G10.4 cdc-14 6262 7.222 0.952 0.959 0.972 0.959 0.900 0.844 0.729 0.907 Probable tyrosine-protein phosphatase cdc-14 [Source:UniProtKB/Swiss-Prot;Acc:P81299]
90. K11H3.6 mrpl-36 7328 7.222 0.948 0.961 0.941 0.961 0.886 0.915 0.685 0.925 Ribosomal protein [Source:RefSeq peptide;Acc:NP_001022680]
91. T22C1.3 T22C1.3 2305 7.221 0.945 0.977 0.953 0.977 0.898 0.937 0.627 0.907
92. K01G5.2 hpl-2 6781 7.219 0.900 0.952 0.940 0.952 0.889 0.903 0.791 0.892 HP1 Like (heterochromatin protein) [Source:RefSeq peptide;Acc:NP_001022653]
93. Y62F5A.1 mdt-8 1838 7.218 0.919 0.969 0.971 0.969 0.892 0.939 0.794 0.765 Mediator of RNA polymerase II transcription subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9U1W2]
94. K04G7.11 K04G7.11 6153 7.217 0.904 0.961 0.950 0.961 0.913 0.935 0.717 0.876 Pre-mRNA-splicing factor syf-2 [Source:UniProtKB/Swiss-Prot;Acc:Q09385]
95. Y53C10A.12 hsf-1 7899 7.216 0.948 0.970 0.947 0.970 0.877 0.843 0.744 0.917 Heat Shock Factor [Source:RefSeq peptide;Acc:NP_493031]
96. F59G1.5 ptp-2 7879 7.215 0.915 0.959 0.958 0.959 0.925 0.949 0.678 0.872 Tyrosine-protein phosphatase non-receptor type [Source:RefSeq peptide;Acc:NP_001293512]
97. F26H9.1 prom-1 6444 7.214 0.963 0.966 0.982 0.966 0.886 0.916 0.740 0.795 PRogression Of Meiosis [Source:RefSeq peptide;Acc:NP_492477]
98. CC4.3 smu-1 4169 7.213 0.931 0.953 0.972 0.953 0.874 0.946 0.697 0.887 Suppressor of Mec and Unc defects [Source:RefSeq peptide;Acc:NP_493279]
99. C38C10.5 rgr-1 4146 7.212 0.951 0.978 0.966 0.978 0.851 0.934 0.730 0.824 Mediator of RNA polymerase II transcription subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:Q03570]
100. K07D4.3 rpn-11 8834 7.211 0.944 0.951 0.962 0.951 0.870 0.871 0.735 0.927 26S proteasome non-ATPase regulatory subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:O76577]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA